Rv2477c - c.948C>G


Drug resistance types
86 Sensitive 28 RR-TB 213 HR-TB 128 MDR-TB 16 Pre-XDR-TB 2 XDR-TB 197 Other
lineage Counts
lineage Count
lineage2.1;lineage4.9 19
lineage3 8
lineage2.2.1 288
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 5
La3;lineage3 1
lineage2.1;lineage4.9;lineage6.3 10
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage4.8 7
lineage4.9 77
lineage4 4
23
La3;M.canetti;lineage2.1;lineage4.9 12
lineage3.1.1 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La1.8.1 2
lineage4.9;lineage6.3 4
M.canetti;lineage2.1;lineage4.9 26
La1.7;lineage4.9 5
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage1.2.2.2 1
lineage5.2 2
M.canetti;lineage2.1;lineage6.3 1
lineage4.4.1.1 3
lineage4.1.3 2
lineage2.1;lineage6.3 2
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
La3;lineage4.8 2
lineage2.1 4
lineage4.1.2.1 22
lineage3.1 1
lineage1.2.1.2.1 1
lineage4.6.2.2 5
lineage4.3.3 2
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage2.2 4
lineage1.1.1 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage2.1;lineage4.1.1.1;lineage6.3 2
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
M.canetti;lineage4.9 4
La2;lineage4.9 1
M.canetti;lineage2.2 3
lineage4.1.1.3 3
lineage4.2.2.2 1
lineage1.1.2;lineage4 1
lineage4.1.1.1 2
M.canetti;lineage2.2.2;lineage6.2 2
lineage2.1;lineage4.1.4;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
lineage2.2.1;lineage4.1.2 1
M.canetti;lineage2.1;lineage4.1.2.1 1
La1;lineage4.9 1
lineage4.5 1
lineage4.1.2.1.1 1
La3 2
lineage4.3.4.1 2
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4.8.1 1
La3;lineage2.1;lineage4.9 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La1.7;lineage4.2 1
La1.2 1
lineage1.1 1
M.canetti;lineage2.1 1
La1.7;M.canetti;lineage4.9 2
lineage4.9;lineage7 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.6.3;lineage4.9;lineage6.3 1
lineage2.2.2 1
lineage4.1;lineage4.8 2
lineage6.3.1 3
M.canetti;lineage4.3.1;lineage4.9 1
lineage2.1;lineage4.3.2;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
La1.7.1;lineage4.9 1
lineage4.3.2 1
lineage2.1;lineage2.2;lineage6.3 1
lineage2.2.1.1 1
La1.2.BCG 1
La3;M.canetti;lineage3.1 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 2
M.canetti;lineage2.1;lineage3 1
lineage4.3.4.2.1 3
lineage2.1;lineage4.9;lineage7 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3;lineage4.9 2
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La1.2.BCG;La1.8.1 1
lineage2.2.1;lineage4 1
M.canetti;lineage4.2;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La1.7.X-unk4;lineage4.9 1
La3;M.canetti;lineage2.1;lineage3.1 1
lineage4.7 2
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage2.2.1;lineage4.1.2.1 1
La3;M.canetti;lineage4.8;lineage4.9 1
lineage4.2;lineage4.9 1
La3;M.canetti;lineage4.9 2
La3;lineage2.1;lineage6.3 1
La3;M.canetti;lineage2.2.1 1
La3;lineage2 1
La3;lineage1.1.2 1
lineage1.2.1.2 1
La1.7.1 1
lineage6.1.3 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage4.6.1.1 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4 1
La2;lineage2.2 1
lineage2.1;lineage4.3.2 1
spoligotype Counts
spoligotype Count
None 670
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675495 Other lineage2.1;lineage4.9 None
ERR9896144 Other lineage3 None
SRR5341332 Pre-XDR-TB lineage3 None
SRR5065511 HR-TB lineage2.2.1 vn
SRR6044790 Other lineage2.1;lineage4.9 None
SRR22251917 MDR-TB lineage2.2.1 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR7911115 Pre-XDR-TB lineage2.2.1 vn
SRR1181020 Other lineage2.2.1 None
ERR1023302 MDR-TB La3;lineage3 None
DRR261098 Sensitive lineage2.2.1 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR5073505 HR-TB lineage2.2.1 vn
SRR22249688 Sensitive lineage2.2.1 None
SRR29050830 MDR-TB lineage2.2.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786444 Sensitive lineage4.8 None
ERR7911139 MDR-TB lineage2.2.1 vn
ERR4828702 MDR-TB lineage2.2.1 vn
SRR6046066 Other lineage4.9 None
ERR2027263 Other lineage4 None
ERR4831809 MDR-TB lineage2.2.1 vn
ERR3797015 HR-TB lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR6789626 Other None
SRR5341330 Other lineage4.9 None
SRR21576648 RR-TB lineage2.2.1 None
SRR26399402 HR-TB lineage2.2.1 None
ERR3468544 Other lineage2.1;lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR4831861 MDR-TB lineage2.2.1 vn
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR22251137 HR-TB lineage2.2.1 None
ERR11489020 MDR-TB lineage2.2.1 None
ERR4831999 MDR-TB lineage2.2.1 None
SRR29051154 MDR-TB lineage2.2.1 None
SRR1196474 Other lineage3.1.1 None
SRR1196546 Other lineage4.9 None
SRR29231479 RR-TB lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR4830223 Other lineage2.2.1 vn
SRR20969617 Sensitive lineage2.2.1 None
ERR13288776 RR-TB lineage2.2.1 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR29056284 Sensitive lineage2.2.1 None
SRR1791696 Other La1.8.1 None
SRR5065465 Sensitive lineage2.2.1 vn
SRR5067272 HR-TB lineage2.2.1 vn
SRR26399948 Other lineage2.2.1 None
SRR3675236 Other None
SRR6153065 Sensitive lineage2.2.1 ca
SRR3675524 Other lineage4.9;lineage6.3 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR2229143 RR-TB lineage4.9 None
ERR3283044 Other lineage4 None
SRR7535086 Other None
SRR26399541 HR-TB lineage2.2.1 None
SRR29440732 MDR-TB lineage2.2.1 None
ERR4799171 Pre-XDR-TB lineage4.8 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR5065360 Sensitive lineage2.2.1 vn
SRR7070434 Sensitive lineage2.2.1 None
SRR21732345 HR-TB lineage2.2.1 None
ERR4797201 Other lineage1.2.2.2 None
ERR7737736 MDR-TB lineage2.2.1 None
ERR4872094 MDR-TB lineage5.2 None
ERR4816478 HR-TB lineage4 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR13258402 MDR-TB lineage2.2.1 None
SRR1173767 MDR-TB lineage4.4.1.1 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9119298 Sensitive lineage2.2.1 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9119268 Other lineage2.2.1 None
ERR4816656 Other lineage4.9 None
ERR13439866 HR-TB lineage2.2.1 None
ERR9786611 HR-TB lineage4.1.3 None
SRR10305744 Sensitive lineage2.2.1 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR21576668 MDR-TB lineage2.2.1 None
DRR454962 Pre-XDR-TB lineage2.2.1 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR5073603 MDR-TB lineage2.2.1 vn
ERR4831817 HR-TB lineage2.2.1 vn
SRR7496509 Other None
ERR736867 Other lineage2.1;lineage4.9 None
SRR29051048 HR-TB lineage2.2.1 None
ERR12015083 Other La3;lineage4.8 None
SRR26399485 HR-TB lineage2.2.1 None
ERR1034634 HR-TB lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR7911320 MDR-TB lineage2.2.1 vn
SRR1165423 RR-TB lineage4.1.2.1 None
SRR29093692 MDR-TB lineage2.2.1 None
ERR4798493 MDR-TB lineage2.2.1 None
SAMN02414850 Other lineage4.1.2.1 None
SRR13861332 Other lineage4.9 None
SRR26399951 HR-TB lineage2.2.1 None
SRR29017497 HR-TB lineage2.2.1 None
SRR1184346 HR-TB lineage3.1 None
SRR1510066 RR-TB lineage1.2.1.2.1 None
ERR9786645 Other lineage4.6.2.2 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR5908228 RR-TB lineage4.3.3 None
SRR26399178 HR-TB lineage2.2.1 None
ERR13289328 RR-TB lineage2.2.1 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR29051429 Other lineage2.2.1 None
SRR30182605 Sensitive lineage2.2.1 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR6046485 Other lineage4.9 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR26937013 Pre-XDR-TB lineage2.2.1 None
SRR5067448 Sensitive lineage2.2.1 vn
ERR3797070 Other lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR4831646 MDR-TB lineage2.2.1 vn
ERR4831780 MDR-TB lineage2.2.1 vn
SRR14066533 Sensitive lineage1.1.1 None
ERR4831600 MDR-TB lineage2.2.1 vn
ERR9786642 Other lineage4.1.2.1 None
ERR12141641 Sensitive lineage2.2.1 None
SRR5067665 HR-TB lineage2.2.1 vn
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR5067582 HR-TB lineage2.2.1 vn
SRR5067684 HR-TB lineage2.2.1 vn
ERR212001 HR-TB None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR6789621 Other lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR4830439 MDR-TB lineage2.2.1 vn
ERR7737780 MDR-TB lineage2.2.1 None
SRR1162864 Other lineage4.1.2.1 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR4831845 HR-TB lineage2.2.1 None
ERR4831922 MDR-TB lineage2.2.1 vn
SRR1163221 MDR-TB lineage4.1.2.1 None
ERR2693228 RR-TB lineage4.9 None
SRR5065611 HR-TB lineage2.2.1 vn
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4830204 HR-TB lineage2.2.1 vn
SRR24083619 Sensitive lineage2.2.1 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4814742 Sensitive lineage2.2.1 gb
SRR21658536 Sensitive lineage2.2.1 None
ERR13439915 HR-TB lineage2.2.1 None
ERR4816585 Other lineage2.2 None
ERR13439923 MDR-TB lineage2.2.1 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR4828201 HR-TB lineage2.2.1 vn
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR5074116 Sensitive lineage2.2.1 vn
SRR30182762 MDR-TB lineage2.2.1 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR29016933 HR-TB lineage2.2.1 None
SRR26399867 Sensitive lineage2.2.1 None
ERR8699776 RR-TB lineage2.2.1 None
SRR29050798 Sensitive lineage2.2.1 None
SRR29096485 RR-TB lineage2.2.1 None
SRR6045526 Other lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR4816551 HR-TB lineage4.1.1.3 None
SRR29016910 HR-TB lineage2.2.1 None
ERR4832001 HR-TB lineage2.2.1 None
SRR26936997 HR-TB lineage2.2.1 None
ERR3283030 HR-TB lineage4.9 None
SRR21713551 Other lineage2.2.1 None
SRR26936952 Pre-XDR-TB lineage2.2.1 None
SRR6045347 Other lineage4.9 None
SRR29096879 Sensitive lineage4.9 None
ERR7339132 HR-TB lineage2.2.1 None
SRR28868389 Sensitive lineage2.2.1 None
SRR26399419 HR-TB lineage2.2.1 None
SRR5067613 HR-TB lineage2.2.1 vn
ERR4799924 Pre-XDR-TB lineage2.2.1 in
ERR2513470 Other lineage4.2.2.2 None
ERR4817692 HR-TB lineage1.1.2;lineage4 None
ERR13439854 HR-TB lineage2.2.1 None
SRR5065361 HR-TB lineage2.2.1 vn
SRR21733247 Sensitive lineage2.2.1 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786617 Other lineage4.1.1.1 None
ERR4831737 HR-TB lineage2.2.1 vn
ERR5917710 Other lineage4.1.2.1 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR3675248 Other lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR5073968 Sensitive lineage2.2.1 vn
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797043 Sensitive lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR553132 MDR-TB lineage4.1.2.1 None
SRR5065425 HR-TB lineage2.2.1 vn
ERR13439882 HR-TB lineage2.2.1 None
ERR4828419 Other lineage2.2.1 vn
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4815441 HR-TB lineage4.9 None
SRR26399981 HR-TB lineage2.2.1 None
ERR1063862 HR-TB lineage4.9 None
ERR4832069 Sensitive lineage2.2.1 vn
ERR13266225 MDR-TB lineage2.2.1;lineage4.1.2 None
ERR4831726 HR-TB lineage2.2.1 vn
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR23961542 Other La1;lineage4.9 None
ERR4832003 HR-TB lineage2.2.1 vn
SRR29096659 Sensitive lineage4.9 None
ERR13093822 Sensitive lineage2.2.1 None
ERR4832033 HR-TB lineage2.2.1 vn
ERR3804169 HR-TB lineage4.1.3 None
ERR13285191 Sensitive lineage4.9 None
SRR26399235 HR-TB lineage2.2.1 None
SRR5073695 HR-TB lineage2.2.1 vn
SRR5065385 HR-TB lineage2.2.1 vn
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR13439913 HR-TB lineage2.2.1 None
SRR13423544 Other lineage4.5 None
ERR2446144 Other lineage3 nl
SRR26937064 MDR-TB lineage2.2.1 None
SRR26399632 Other lineage2.2.1 None
ERR7911484 MDR-TB lineage2.2.1 vn
ERR760733 MDR-TB lineage4.1.2.1.1 None
SRR1172728 RR-TB La3 None
ERR4830214 HR-TB lineage2.2.1 vn
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR29051401 Other lineage2.2.1 None
ERR9117709 Other None
ERR176766 HR-TB lineage2.1;lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR9119362 HR-TB lineage2.2.1 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR1172817 Other La3 None
SRR26936937 MDR-TB lineage2.2.1 None
ERR13439924 MDR-TB lineage2.2.1 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR11067638 MDR-TB lineage2.2.1 None
SRR29093787 Other lineage2.2.1 None
SRR12416840 MDR-TB lineage4.9 None
ERR4819046 Sensitive lineage2.2.1 None
SRR5067409 HR-TB lineage2.2.1 vn
SRR26399156 HR-TB lineage2.2.1 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR13439902 HR-TB lineage2.2.1 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR29096246 Sensitive La1.7;lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR4831765 HR-TB lineage2.2.1 vn
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR5311094 HR-TB lineage4.9 None
SRR23961559 Other La1.7;lineage4.2 None
SRR23961549 Other La1.2 None
SRR5067313 HR-TB lineage2.2.1 vn
SRR7496472 Other lineage4.9 None
SRR29056096 Sensitive lineage2.2.1 None
SRR1184294 Other lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR4832010 HR-TB lineage2.2.1 vn
ERR502912 Other lineage2.2.1 None
ERR323041 HR-TB M.canetti;lineage2.1 None
SRR29051170 HR-TB lineage2.2.1 None
SRR13861241 HR-TB lineage4.9 None
ERR9786843 Other None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR28351288 Sensitive lineage2.2.1 None
SRR5074065 HR-TB lineage2.2.1 vn
ERR2514692 Other None
SRR26400073 HR-TB lineage2.2.1 None
ERR234659 Other None
ERR4831632 Pre-XDR-TB lineage2.2.1 vn
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4828156 HR-TB lineage2.2.1 vn
ERR9786601 Other lineage4.1.2.1 None
SRR6044815 Other lineage4.9 None
DRR454960 Pre-XDR-TB lineage2.2.1 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR9786421 Other lineage4.1.2.1 None
SRR3675539 HR-TB lineage4.9;lineage7 None
SRR3675487 Other M.canetti;lineage4.9 None
ERR4796757 Pre-XDR-TB lineage2.2.1 in
ERR4832055 MDR-TB lineage2.2.1 None
SRR6045555 Other lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR3675243 Other lineage4.9 None
SRR5073895 Sensitive lineage2.2.1 vn
SRR3675572 Other None
SRR26937038 MDR-TB lineage2.2.1 None
SRR22250104 Sensitive lineage2.2.1 None
SRR5073802 Sensitive lineage2.2.1 vn
SRR5074168 HR-TB lineage2.2.1 vn
SRR6045380 Other lineage2.1;lineage4.9 None
ERR4830369 Sensitive lineage2.2.1 vn
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5067563 HR-TB lineage2.2.1 vn
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR11049615 HR-TB lineage2.2.1 None
SRR5065442 Sensitive lineage2.2.1 vn
ERR7737681 MDR-TB lineage2.2.1 None
DRR261149 Sensitive lineage2.2.1 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR4832057 HR-TB lineage2.2.1 vn
SRR1166821 Other lineage4.1.2.1 None
SRR1196494 MDR-TB None
SRR3675269 RR-TB lineage4.9 None
ERR4830339 HR-TB lineage2.2.1 vn
ERR13439916 HR-TB lineage2.2.1 None
SRR26937002 MDR-TB lineage2.2.1 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR5065460 Other lineage2.2.1 vn
SRR1184312 Other lineage2.2.1 None
ERR7737684 MDR-TB lineage2.2.1 None
SRR26399217 HR-TB lineage2.2.1 None
ERR4815604 Other None
SRR18910194 HR-TB lineage2.2.2 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1173384 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR3804162 Sensitive lineage6.3.1 None
SRR5065238 HR-TB lineage2.2.1 vn
ERR4769521 RR-TB lineage4.9 None
DRR261136 Sensitive lineage2.2.1 None
SRR5073591 HR-TB lineage2.2.1 vn
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR29050859 Other lineage4.9 None
ERR4816999 Other None
ERR4828629 HR-TB lineage2.2.1 vn
ERR11465665 Other lineage4.1.1.3 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR4797588 MDR-TB lineage3 None
DRR130100 MDR-TB lineage2.2.1 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR4831651 MDR-TB lineage2.2.1 vn
SRR5074179 Other lineage2.2.1 vn
SRR29051121 Sensitive lineage2.2.1 None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR29053605 Sensitive lineage2.2.1 None
SRR26399586 Sensitive lineage2.2.1 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR26399530 MDR-TB lineage2.2.1 None
SRR6044942 HR-TB lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR13439901 HR-TB lineage2.2.1 None
ERR9117805 Other lineage4.3.2 None
SRR29093599 RR-TB lineage2.2.1 None
SRR6797665 Sensitive lineage2.2.1 None
ERR9119219 HR-TB lineage2.2.1 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR30182645 MDR-TB lineage2.2.1 None
SRR5067697 HR-TB lineage2.2.1 vn
ERR9787223 Sensitive lineage6.3.1 None
ERR990545 Other lineage3 None
SRR1165699 Other lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
SRR20969626 Sensitive lineage2.2.1 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4817731 HR-TB lineage4.9 None
ERR2446570 Sensitive lineage4.8 nl
SRR26399245 HR-TB lineage2.2.1 None
ERR4816466 HR-TB lineage4.9 None
SRR24083622 Sensitive lineage2.2.1 None
ERR4831607 MDR-TB lineage2.2.1 vn
SRR29441074 Other lineage2.2.1 None
ERR4828718 HR-TB lineage2.2.1 vn
ERR9786711 Sensitive lineage4.6.2.2 None
SRR30182434 MDR-TB lineage2.2.1 None
SRR10040323 MDR-TB lineage2.2.1 None
ERR1063849 HR-TB lineage4.9 None
ERR4828687 MDR-TB lineage2.2.1 None
SRR3675549 Other lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4831856 MDR-TB lineage2.2.1 vn
SRR26399656 Sensitive lineage2.2.1 None
SRR26399451 HR-TB lineage2.2.1 None
SRR3675494 RR-TB lineage4.9 None
SRR5073515 Sensitive lineage2.2.1 vn
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR7911333 MDR-TB lineage2.2.1 vn
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR26399258 MDR-TB lineage2.2.1.1 None
ERR9786656 Sensitive lineage4.1.2.1 None
SRR3675311 Other lineage4.9 None
SRR13861305 Other lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR13289315 Sensitive lineage2.2.1 None
SRR6045233 Other M.canetti;lineage4.9 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR7131023 Other lineage4.1.2.1 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
ERR4828697 MDR-TB lineage2.2.1 vn
ERR4832048 MDR-TB lineage2.2.1 vn
ERR4832068 HR-TB lineage2.2.1 vn
SRR1165584 Other lineage4.1.2.1 None
ERR4808982 Sensitive lineage2.2.1 za
ERR7911506 MDR-TB lineage2.2.1 vn
SRR26400104 MDR-TB lineage2.2.1 None
ERR9119096 RR-TB lineage4.3.3 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
SRR1184381 MDR-TB None
SRR3675221 Other lineage4.9 None
ERR11252664 Other lineage2.2.1 None
SRR26400010 HR-TB lineage2.2.1 None
SRR1172857 Other None
ERR9787197 Other None
SRR6797404 Sensitive lineage2.2.1 None
ERR4817060 Other None
ERR2517528 RR-TB lineage3 nl
ERR6362540 RR-TB lineage2.2.1 None
SRR26399339 MDR-TB lineage2.2.1 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR7737663 MDR-TB lineage2.2.1 None
SRR10808730 Other lineage4.9 None
ERR9786671 Other None
SRR26399343 HR-TB lineage2.2.1 None
ERR176549 Other lineage4.3.4.2.1 None
ERR4831706 HR-TB lineage2.2.1 vn
ERR4832023 MDR-TB lineage2.2.1 None
SRR1180226 HR-TB lineage4.9 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR1173633 Other lineage4.9 None
SRR1173453 Other lineage4.4.1.1 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR1640750 Other None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR5341333 Other lineage2.1;lineage4.9 None
SRR26399413 HR-TB lineage2.2.1 None
ERR4831834 HR-TB lineage2.2.1 vn
SRR3675510 Sensitive La3;lineage4.9 None
ERR13285192 Sensitive lineage4.9 None
ERR4831993 MDR-TB lineage2.2.1 vn
ERR6866807 Other lineage4.9 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR10465886 Other lineage2.2.1 None
SRR5067238 HR-TB lineage2.2.1 vn
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR16370542 MDR-TB lineage2.2.1 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR4407463 HR-TB None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR9119267 HR-TB lineage2.2.1 None
SRR13861510 Other lineage4.9 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR4831879 HR-TB lineage2.2.1 vn
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4818929 HR-TB lineage4.9 None
SRR26399239 Sensitive lineage4.9 None
SRR26937008 MDR-TB lineage2.2.1;lineage4 None
ERR3283040 HR-TB lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1196583 Other lineage4.9 None
SRR1165506 Other lineage4.1.2.1 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR5067348 MDR-TB lineage2.2.1 vn
SRR3675385 Other La1.7;lineage4.9 None
SRR26399903 HR-TB lineage2.2.1 None
DRR261168 Sensitive lineage2.2.1 None
ERR2517514 Sensitive lineage4.8 None
ERR3275220 Other lineage3 nl
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR1173788 Sensitive lineage4.9 None
SRR26399608 Sensitive lineage2.2.1 None
ERR9787139 Other lineage6.3.1 None
SRR26399410 HR-TB lineage2.2.1 None
ERR9029390 Sensitive lineage2.2.1 None
SRR1710057 Other lineage2.1 None
ERR7911331 MDR-TB lineage2.2.1 vn
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR26399710 HR-TB lineage2.2.1 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR4831971 HR-TB lineage2.2.1 vn
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR16370540 MDR-TB lineage2.2.1 None
ERR8665994 Other lineage4.9 None
ERR8976106 Sensitive lineage2.2.1 None
ERR4819932 Other lineage4.7 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR9786627 Other lineage4.1.2.1 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR5065343 Other lineage2.2.1 vn
SRR5074105 HR-TB lineage2.2.1 vn
SRR5073670 Sensitive lineage2.2.1 vn
SRR26399638 Other lineage2.2.1 None
SRR7496517 Other None
SRR26937052 Other lineage2.2.1 None
SRR26399329 HR-TB lineage2.2.1 None
ERR3275201 Sensitive lineage4.8 nl
ERR3275196 Other lineage2.2.1 nl
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR6326069 Pre-XDR-TB lineage4.3.4.1 None
SRR26937065 MDR-TB lineage2.2.1 None
SRR3675232 Other lineage4.1.2.1 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR5073667 Other lineage2.2.1;lineage4.1.2.1 vn
SRR29093839 Sensitive lineage2.2.1 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
ERR4828477 Other lineage2.2.1 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR16370559 Pre-XDR-TB lineage2.2.1 None
SRR26937062 MDR-TB lineage2.2.1 None
SRR5067308 Sensitive lineage2.2.1 vn
SRR5067243 HR-TB lineage2.2.1 vn
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3675275 Other lineage4.9 None
SRR5067240 HR-TB lineage2.2.1 vn
SRR5073872 Sensitive lineage2.2.1 vn
SRR26399600 Sensitive lineage2.2.1 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675507 Other lineage4.9 None
SRR5065412 HR-TB lineage2.2.1 vn
SRR21676323 Sensitive lineage2.2.1 None
ERR9119437 MDR-TB lineage2.2.1 None
SRR26936985 MDR-TB lineage2.2.1 None
ERR4817893 Other La3;lineage4.8 None
ERR13439925 MDR-TB lineage2.2.1 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR4831851 HR-TB lineage2.2.1 vn
SRR24083707 Sensitive lineage2.2.1 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR20969677 HR-TB La3;lineage2 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
SRR24083642 Sensitive lineage2.2.1 None
SRR1183049 RR-TB lineage2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
SRR11972306 Pre-XDR-TB lineage2.2.1 None
SRR18003019 Other lineage2.2.1 None
ERR7911514 MDR-TB lineage2.2.1 vn
ERR9119669 HR-TB lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
ERR5162090 RR-TB lineage4.9 None
SRR3416776 Other lineage2.1 None
SRR26399699 Other lineage2.2.1 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4811565 Sensitive lineage2.2.1 cn
ERR4821053 RR-TB lineage3 None
DRR261024 Other lineage2.2.1 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5067695 HR-TB lineage2.2.1 vn
ERR4820773 HR-TB lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR4819422 HR-TB lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR1181289 Other lineage2.2.1 None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR5073550 HR-TB lineage2.2.1 vn
SRR7240492 HR-TB La1.7.1 None
SRR7496523 Other lineage4.7 None
ERR9786604 Other None
SRR1165667 Other lineage4.9;lineage6.3 None
ERR4828266 Sensitive lineage2.2.1 None
SRR3675457 Other lineage4.9 None
SRR29017491 Other lineage2.2.1 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR13439875 HR-TB lineage2.2.1 None
DRR261095 Other lineage2.2.1 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4828713 Sensitive lineage2.2.1 vn
ERR4828728 HR-TB lineage2.2.1 vn
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR1063858 HR-TB lineage4.9 None
SRR5067396 HR-TB lineage2.2.1 vn
SRR26937074 MDR-TB lineage2.2.1 None
DRR261035 Sensitive lineage2.2.1 None
ERR3797023 HR-TB La1.8.1 None
ERR9787165 Other lineage6.1.3 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4819241 Other lineage4.9 None
ERR4831872 MDR-TB lineage2.2.1 vn
SRR1180137 Other lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR26399331 Other lineage2.2.1 None
ERR9786569 Other lineage4.8 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR26399397 Sensitive lineage2.2.1 None
ERR3468607 Other lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR5065347 Other lineage2.2.1 vn
ERR4830243 HR-TB lineage2.2.1 vn
SRR5065336 MDR-TB lineage2.2.1 vn
SRR26399467 Other lineage2.2.1 None
SRR5065350 Sensitive lineage2.2.1 vn
ERR4831758 MDR-TB lineage2.2.1 vn
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR4828731 Other lineage2.2.1 vn
ERR4831770 HR-TB lineage2.2.1 vn
ERR4831847 MDR-TB lineage2.2.1 vn
ERR9119290 HR-TB lineage2.2.1 None
SRR5073585 HR-TB lineage2.2.1 vn
ERR6358755 Other lineage4.6.1.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR18213713 HR-TB None
ERR2514327 HR-TB lineage4.8 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR10748418 MDR-TB lineage2.2.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR3675214 Other lineage4.9 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
SRR26399973 Other La3;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR5073595 Sensitive lineage2.2.1 vn
SRR5065522 HR-TB lineage2.2.1 vn
SRR6045053 Other lineage4 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR20969708 HR-TB lineage2.2 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR16151369 Sensitive lineage2.2.1 None
SRR26399896 HR-TB lineage2.2.1 None