Rv2477c - c.948C>G


Drug resistance types
65 Sensitive 45 RR-TB 143 HR-TB 174 MDR-TB 15 Pre-XDR-TB 2 XDR-TB 165 Other
lineage Counts
lineage Count
La3;lineage3 1
lineage2.2.1 237
M.canetti;lineage4.9 4
lineage4.9 71
La1.8.1 2
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
La1;lineage4.9 1
M.canetti;lineage2.1;lineage4.9 26
lineage4.1.2.1 22
lineage2.1 4
lineage2.1;lineage4.9 19
La3;M.canetti;lineage2.1;lineage4.9 12
lineage2.2.1.1 1
M.canetti;lineage2.2.2;lineage6.2 2
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
lineage2.1;lineage4.3.2;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.1.1.3 3
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
lineage4.6.2.2 5
La1.7;lineage4.9 4
La1.7.1;lineage4.9 1
lineage4.8 7
lineage4.5 1
lineage4.1.2.1.1 1
lineage2.1;lineage4.3.2 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage1.2.2.2 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 10
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage1.2.1.2.1 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 5
M.canetti;lineage2.2 3
M.canetti;lineage2.1;lineage3 1
lineage4.3.3 2
lineage2.2 3
lineage4 4
22
lineage3 8
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La2;lineage4.9 1
lineage4.9;lineage6.3 4
La1.2.BCG;La1.8.1 1
lineage4.6.1.1 1
lineage4.1;lineage4.8 2
lineage4.4.1.1 3
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.2.2.2 1
lineage3.1 1
lineage6.3.1 3
M.canetti;lineage4.3.1;lineage4.9 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage2.2.1;lineage4.1.2.1 1
lineage4.1.1.1 2
lineage4.3.2 1
M.canetti;lineage2.1;lineage4.1.2.1 1
M.canetti;lineage2.1;lineage6.3 1
La3 2
lineage4.1.3 2
lineage5.2 2
La3;lineage4.8 2
lineage4.8.1 1
M.canetti;lineage2.1 1
La3;lineage2.1;lineage4.9 2
lineage4.3.4.2.1 3
La1.7;lineage4.2 1
lineage2.2.1;lineage4 1
lineage4.6.3;lineage4.9;lineage6.3 1
La1.7.1 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.7 2
La3;M.canetti;lineage4.9 2
La3;lineage2.1;lineage6.3 1
lineage1.1.2;lineage4 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 2
lineage4.3.4.1 2
La3;M.canetti;lineage4.8;lineage4.9 1
La1.7;M.canetti;lineage4.9 2
lineage3.1.1 1
M.canetti;lineage4.2;lineage4.9 1
lineage1.2.1.2 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage1.1.1 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La3;lineage2 1
lineage4.2;lineage4.9 1
lineage6.1.3 1
lineage1.1 1
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La3;lineage4.9 2
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La1.2 1
lineage4.9;lineage7 2
M.canetti;lineage2.1;lineage4 1
La3;M.canetti;lineage2.2.1 1
lineage2.2.2 1
lineage2.1;lineage6.3 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La1.2.BCG 1
lineage2.1;lineage4.9;lineage7 1
lineage2.1;lineage2.2;lineage6.3 1
La1.7.X-unk4;lineage4.9 1
La3;M.canetti;lineage2.1;lineage3.1 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La2;lineage2.2 1
La3;lineage1.1.2 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
spoligotype Counts
spoligotype Count
None 609
Geographic prevalence
Country level data for this variant is available for 117 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR1023302 MDR-TB La3;lineage3 None
ERR4814742 Sensitive lineage2.2.1 gb
SRR3675487 MDR-TB M.canetti;lineage4.9 None
SRR3675214 Other lineage4.9 None
ERR4828266 Sensitive lineage2.2.1 None
DRR261098 Sensitive lineage2.2.1 None
SRR5065336 MDR-TB lineage2.2.1 vn
SRR1791696 RR-TB La1.8.1 None
SRR5067240 HR-TB lineage2.2.1 vn
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1180226 HR-TB lineage4.9 None
ERR10465886 Other lineage2.2.1 None
SRR22249688 Sensitive lineage2.2.1 None
SRR23961542 Other La1;lineage4.9 None
ERR5311089 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR7070434 Sensitive lineage2.2.1 None
ERR9786627 Other lineage4.1.2.1 None
SRR5067563 HR-TB lineage2.2.1 vn
SRR12142341 HR-TB lineage2.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR5074105 HR-TB lineage2.2.1 vn
ERR323047 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR323060 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR26399258 MDR-TB lineage2.2.1.1 None
ERR3797023 MDR-TB La1.8.1 None
SRR26936997 HR-TB lineage2.2.1 None
SRR5065442 Sensitive lineage2.2.1 vn
SRR3675495 RR-TB lineage2.1;lineage4.9 None
SRR5073591 HR-TB lineage2.2.1 vn
SRR5067243 HR-TB lineage2.2.1 vn
ERR4832023 MDR-TB lineage2.2.1 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR4769521 RR-TB lineage4.9 None
DRR261136 Sensitive lineage2.2.1 None
ERR4831765 HR-TB lineage2.2.1 vn
ERR386953 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR5065360 Sensitive lineage2.2.1 vn
ERR8976106 Sensitive lineage2.2.1 None
SRR26399419 HR-TB lineage2.2.1 None
SRR26399699 Other lineage2.2.1 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR11489020 MDR-TB lineage2.2.1 None
SRR16370542 MDR-TB lineage2.2.1 None
SRR26937065 MDR-TB lineage2.2.1 None
ERR8699776 RR-TB lineage2.2.1 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR5067238 HR-TB lineage2.2.1 vn
ERR1063846 HR-TB lineage4.9 None
SRR13861305 Other lineage4.9 None
ERR4831999 MDR-TB lineage2.2.1 None
ERR323058 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR5073968 Sensitive lineage2.2.1 vn
SRR5065343 Other lineage2.2.1 vn
ERR4828731 Other lineage2.2.1 vn
ERR1873393 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR4816551 MDR-TB lineage4.1.1.3 None
ERR4830223 Other lineage2.2.1 vn
SRR1166821 RR-TB lineage4.1.2.1 None
ERR4820854 Other lineage4.1.2.1 None
ERR7911115 Pre-XDR-TB lineage2.2.1 vn
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR5917710 RR-TB lineage4.1.2.1 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR26399896 HR-TB lineage2.2.1 None
SRR26399530 MDR-TB lineage2.2.1 None
ERR1063862 HR-TB lineage4.9 None
ERR4832069 Sensitive lineage2.2.1 vn
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR26399331 Other lineage2.2.1 None
ERR7911333 MDR-TB lineage2.2.1 vn
ERR9119219 HR-TB lineage2.2.1 None
ERR4799924 Pre-XDR-TB lineage2.2.1 in
ERR4832003 HR-TB lineage2.2.1 vn
SRR14801759 MDR-TB La1.7;lineage4.9 None
SRR11972306 Pre-XDR-TB lineage2.2.1 None
ERR9786421 Other lineage4.1.2.1 None
ERR4832033 HR-TB lineage2.2.1 vn
SRR20969626 Sensitive lineage2.2.1 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR4830439 MDR-TB lineage2.2.1 vn
SRR5065385 HR-TB lineage2.2.1 vn
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4828687 MDR-TB lineage2.2.1 None
ERR2446570 Sensitive lineage4.8 nl
ERR4830369 Sensitive lineage2.2.1 vn
SRR13423544 Other lineage4.5 None
SRR26399245 HR-TB lineage2.2.1 None
ERR3801503 Other lineage4.6.2.2 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR8665994 RR-TB lineage4.9 None
SRR5067396 HR-TB lineage2.2.1 vn
SRR26936937 MDR-TB lineage2.2.1 None
SRR21658536 Sensitive lineage2.2.1 None
SRR3675457 Other lineage4.9 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
SRR5067409 HR-TB lineage2.2.1 vn
SRR3675450 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR5067313 HR-TB lineage2.2.1 vn
SRR10808730 Other lineage4.9 None
ERR4797201 Other lineage1.2.2.2 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR3416776 Other lineage2.1 None
ERR9786711 Other lineage4.6.2.2 None
ERR9119268 Other lineage2.2.1 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SAMN02414850 Other lineage4.1.2.1 None
ERR5311094 HR-TB lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR26399951 HR-TB lineage2.2.1 None
ERR4188350 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR4832001 HR-TB lineage2.2.1 None
SRR5065511 HR-TB lineage2.2.1 vn
SRR1510066 RR-TB lineage1.2.1.2.1 None
ERR9786601 Other lineage4.1.2.1 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4828697 MDR-TB lineage2.2.1 vn
SRR26936952 Pre-XDR-TB lineage2.2.1 None
SRR3675515 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR10748418 MDR-TB lineage2.2.1 None
ERR5311083 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4831834 HR-TB lineage2.2.1 vn
SRR5067684 HR-TB lineage2.2.1 vn
SRR10040323 MDR-TB lineage2.2.1 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
SRR26937013 Pre-XDR-TB lineage2.2.1 None
ERR323038 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR26400104 MDR-TB lineage2.2.1 None
ERR9119096 RR-TB lineage4.3.3 None
SRR20970016 Other lineage2.2 None
SRR1173788 Sensitive lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR6045053 Other lineage4 None
ERR9786642 Other lineage4.1.2.1 None
ERR4831651 MDR-TB lineage2.2.1 vn
SRR26399339 MDR-TB lineage2.2.1 None
SRR26399410 HR-TB lineage2.2.1 None
ERR9786671 Other None
SRR28351288 Sensitive lineage2.2.1 None
ERR4815604 Other None
SRR26399156 HR-TB lineage2.2.1 None
SRR1640750 RR-TB None
ERR9117709 Other None
SRR6789626 Other None
ERR212001 HR-TB None
ERR4831847 MDR-TB lineage2.2.1 vn
ERR278594 MDR-TB lineage2.1;lineage4.9 None
SRR5341332 Pre-XDR-TB lineage3 None
SRR3675269 RR-TB lineage4.9 None
ERR4828201 HR-TB lineage2.2.1 vn
ERR990545 RR-TB lineage3 None
SRR6045555 Other lineage4.9 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR26937064 MDR-TB lineage2.2.1 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR1184312 Other lineage2.2.1 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR7911514 MDR-TB lineage2.2.1 vn
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR22251917 MDR-TB lineage2.2.1 None
SRR26399867 Sensitive lineage2.2.1 None
ERR6358755 Other lineage4.6.1.1 None
ERR3797016 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
SRR6046066 Other lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR4828713 Sensitive lineage2.2.1 vn
ERR4831809 MDR-TB lineage2.2.1 vn
ERR3283016 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
ERR4828728 HR-TB lineage2.2.1 vn
SRR21576648 RR-TB lineage2.2.1 None
ERR4831879 HR-TB lineage2.2.1 vn
ERR4831861 MDR-TB lineage2.2.1 vn
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR7339132 HR-TB lineage2.2.1 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR9119362 HR-TB lineage2.2.1 None
ERR2513470 Other lineage4.2.2.2 None
SRR26400010 HR-TB lineage2.2.1 None
SRR22251137 HR-TB lineage2.2.1 None
SRR5067348 MDR-TB lineage2.2.1 vn
ERR2517528 RR-TB lineage3 nl
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR7737684 MDR-TB lineage2.2.1 None
SRR3675486 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1184346 HR-TB lineage3.1 None
ERR3804162 Sensitive lineage6.3.1 None
DRR130100 MDR-TB lineage2.2.1 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
SRR26937038 MDR-TB lineage2.2.1 None
SRR5073585 HR-TB lineage2.2.1 vn
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR5311096 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675248 Other lineage4.9 None
SRR26399586 Sensitive lineage2.2.1 None
ERR3797043 Sensitive lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR4831851 HR-TB lineage2.2.1 vn
ERR553132 MDR-TB lineage4.1.2.1 None
ERR4828419 Other lineage2.2.1 vn
ERR323036 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR5073667 Other lineage2.2.1;lineage4.1.2.1 vn
ERR176793 Other lineage4.1.1.1 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR26399600 Sensitive lineage2.2.1 None
ERR9117805 Other lineage4.3.2 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR9786525 RR-TB lineage4.1;lineage4.8 None
ERR2229143 RR-TB lineage4.9 None
ERR3797070 Other lineage4.9 None
SRR5065238 HR-TB lineage2.2.1 vn
ERR4831607 MDR-TB lineage2.2.1 vn
ERR4799171 Pre-XDR-TB lineage4.8 None
SRR1184294 Other lineage4.9 None
SRR5067697 HR-TB lineage2.2.1 vn
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4831737 HR-TB lineage2.2.1 vn
ERR4819877 HR-TB lineage4.9 None
ERR3468544 RR-TB lineage2.1;lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR2446144 Other lineage3 nl
ERR4831845 HR-TB lineage2.2.1 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR1172728 RR-TB La3 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
ERR3283042 HR-TB lineage4.9 None
SRR5073802 Sensitive lineage2.2.1 vn
ERR9786611 HR-TB lineage4.1.3 None
ERR9119500 MDR-TB lineage5.2 None
ERR12015083 Other La3;lineage4.8 None
SRR5073603 MDR-TB lineage2.2.1 vn
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4831817 HR-TB lineage2.2.1 vn
SRR6458423 HR-TB lineage2.2.1 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR4819046 Sensitive lineage2.2.1 None
SRR1162864 MDR-TB lineage4.1.2.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4828718 HR-TB lineage2.2.1 vn
SRR24083622 Sensitive lineage2.2.1 None
ERR7911506 MDR-TB lineage2.2.1 vn
SRR26399485 HR-TB lineage2.2.1 None
SRR12708389 MDR-TB lineage4.8.1 None
SRR26399656 Sensitive lineage2.2.1 None
ERR323041 MDR-TB M.canetti;lineage2.1 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
SRR1196546 Other lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
DRR261035 Sensitive lineage2.2.1 None
SRR10305744 Sensitive lineage2.2.1 None
ERR3468607 RR-TB lineage4.9 None
ERR4832055 MDR-TB lineage2.2.1 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR1172817 Other La3 None
SRR23961559 Other La1.7;lineage4.2 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675311 Other lineage4.9 None
ERR5908228 RR-TB lineage4.3.3 None
SRR26937008 MDR-TB lineage2.2.1;lineage4 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR26399948 Other lineage2.2.1 None
SRR6045952 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4796757 Pre-XDR-TB lineage2.2.1 in
SRR6045380 Other lineage2.1;lineage4.9 None
SRR5065465 Sensitive lineage2.2.1 vn
ERR3275196 RR-TB lineage2.2.1 nl
ERR1034634 HR-TB lineage4.9 None
SRR7240492 MDR-TB La1.7.1 None
SRR6046485 Other lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
SRR6045233 Other M.canetti;lineage4.9 None
SRR3675464 MDR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR4832048 MDR-TB lineage2.2.1 vn
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR7496523 Other lineage4.7 None
ERR9786617 Other lineage4.1.1.1 None
ERR4832068 HR-TB lineage2.2.1 vn
ERR9786682 Other lineage4.1.2.1 None
SRR21732345 HR-TB lineage2.2.1 None
ERR12141641 Sensitive lineage2.2.1 None
SRR26399413 HR-TB lineage2.2.1 None
SRR26399343 HR-TB lineage2.2.1 None
ERR9786604 Other None
ERR11252664 Other lineage2.2.1 None
ERR9786843 Other None
SRR18213713 HR-TB None
ERR4816999 Other None
ERR4817060 Other None
ERR9786444 Sensitive lineage4.8 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1196583 Other lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4817692 MDR-TB lineage1.1.2;lineage4 None
ERR176766 MDR-TB lineage2.1;lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR3283044 Other lineage4 None
ERR4830339 HR-TB lineage2.2.1 vn
SRR26937002 MDR-TB lineage2.2.1 None
ERR7911139 MDR-TB lineage2.2.1 vn
SRR3675545 RR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675444 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR4831646 MDR-TB lineage2.2.1 vn
SRR26399239 Sensitive lineage4.9 None
ERR9119669 MDR-TB lineage4.9 None
SRR5073670 Sensitive lineage2.2.1 vn
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR3675506 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR7737736 MDR-TB lineage2.2.1 None
ERR4828702 MDR-TB lineage2.2.1 vn
ERR3283030 HR-TB lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
ERR7911331 MDR-TB lineage2.2.1 vn
ERR7911320 MDR-TB lineage2.2.1 vn
ERR502912 Other lineage2.2.1 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR5065412 HR-TB lineage2.2.1 vn
SRR6045347 Other lineage4.9 None
ERR176658 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR6326069 Pre-XDR-TB lineage4.3.4.1 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
SRR6789621 Other lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5073895 Sensitive lineage2.2.1 vn
SAMEA2533358 MDR-TB lineage4.1.1.3 None
SRR1173384 Other lineage4.9 None
SRR5074179 Other lineage2.2.1 vn
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR1063849 HR-TB lineage4.9 None
SRR7496472 Other lineage4.9 None
SRR20969617 Sensitive lineage2.2.1 None
SRR26937074 MDR-TB lineage2.2.1 None
ERR4872094 MDR-TB lineage5.2 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR5067308 Sensitive lineage2.2.1 vn
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR4815441 HR-TB lineage4.9 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR1196474 Other lineage3.1.1 None
SRR26399981 HR-TB lineage2.2.1 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR4831726 HR-TB lineage2.2.1 vn
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR3675221 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR9119437 MDR-TB lineage2.2.1 None
ERR4828477 Other lineage2.2.1 None
DRR261095 Other lineage2.2.1 None
SRR26937052 Other lineage2.2.1 None
SRR5065460 Other lineage2.2.1 vn
ERR6358837 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR9787223 Sensitive lineage6.3.1 None
SRR12006550 Other lineage1.2.1.2 None
SRR5067665 HR-TB lineage2.2.1 vn
SRR1165699 Other lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR1063858 HR-TB lineage4.9 None
SRR5073695 HR-TB lineage2.2.1 vn
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR22250104 Sensitive lineage2.2.1 None
ERR7911484 MDR-TB lineage2.2.1 vn
SRR1181289 RR-TB lineage2.2.1 None
ERR4814352 Other lineage2.2.1 None
SRR5074168 HR-TB lineage2.2.1 vn
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1173767 MDR-TB lineage4.4.1.1 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR14066533 RR-TB lineage1.1.1 None
ERR9119298 Sensitive lineage2.2.1 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
SRR16370540 MDR-TB lineage2.2.1 None
SRR6044815 RR-TB lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR21733247 Sensitive lineage2.2.1 None
SRR21576668 MDR-TB lineage2.2.1 None
ERR9786694 Other lineage4.1.2.1 None
SRR5065522 HR-TB lineage2.2.1 vn
SRR5065350 Sensitive lineage2.2.1 vn
SRR5073550 HR-TB lineage2.2.1 vn
SRR20969677 HR-TB La3;lineage2 None
ERR4831856 MDR-TB lineage2.2.1 vn
SRR5074065 HR-TB lineage2.2.1 vn
ERR4828872 RR-TB lineage4.2;lineage4.9 None
SRR26399451 HR-TB lineage2.2.1 None
SRR3675494 RR-TB lineage4.9 None
SRR1180137 RR-TB lineage2.2.1 None
SRR1165423 RR-TB lineage4.1.2.1 None
SRR5073515 Sensitive lineage2.2.1 vn
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4797588 MDR-TB lineage3 None
SRR12416840 MDR-TB lineage4.9 None
ERR9119267 HR-TB lineage2.2.1 None
SRR13861332 Other lineage4.9 None
ERR9787165 Other lineage6.1.3 None
SRR21713551 Other lineage2.2.1 None
ERR126608 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675243 MDR-TB lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
SRR5067272 HR-TB lineage2.2.1 vn
ERR4819241 Other lineage4.9 None
ERR473314 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR4831780 MDR-TB lineage2.2.1 vn
SRR1165667 Other lineage4.9;lineage6.3 None
SRR26399402 HR-TB lineage2.2.1 None
SRR7131023 Other lineage4.1.2.1 None
SRR5067448 Sensitive lineage2.2.1 vn
ERR4831770 HR-TB lineage2.2.1 vn
SRR1165584 Other lineage4.1.2.1 None
ERR4808982 Sensitive lineage2.2.1 za
SRR3675568 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR3675554 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4831600 MDR-TB lineage2.2.1 vn
SRR13861241 HR-TB lineage4.9 None
ERR4830243 HR-TB lineage2.2.1 vn
SRR7496509 Other None
SRR3675572 Other None
SRR1184381 MDR-TB None
ERR234659 HR-TB None
SRR7535086 Other None
ERR2514692 Other None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR26399397 Sensitive lineage2.2.1 None
SRR1172857 Other None
SRR7496517 Other None
ERR4407463 HR-TB None
ERR9787197 Other None
SRR3675236 Other None
ERR323040 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR26937062 MDR-TB lineage2.2.1 None
ERR6866807 RR-TB lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR13861510 Other lineage4.9 None
ERR9119290 HR-TB lineage2.2.1 None
SRR21676323 Sensitive lineage2.2.1 None
SRR26399329 HR-TB lineage2.2.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
DRR261168 Sensitive lineage2.2.1 None
ERR2514327 HR-TB lineage4.8 None
SRR3675507 RR-TB lineage4.9 None
SRR26400073 HR-TB lineage2.2.1 None
ERR2517514 Sensitive lineage4.8 None
SRR23961549 Other La1.2 None
SRR3675549 Other lineage4.9 None
SRR1165506 Other lineage4.1.2.1 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
ERR4831872 MDR-TB lineage2.2.1 vn
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR9029390 Sensitive lineage2.2.1 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR3675322 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
SRR18910194 HR-TB lineage2.2.2 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR5073595 Sensitive lineage2.2.1 vn
ERR4821053 RR-TB lineage3 None
DRR261024 Other lineage2.2.1 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR16151369 Sensitive lineage2.2.1 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR4816466 HR-TB lineage4.9 None
SRR3675561 RR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
ERR4830204 HR-TB lineage2.2.1 vn
ERR7737663 MDR-TB lineage2.2.1 None
SRR26399541 HR-TB lineage2.2.1 None
ERR4798262 HR-TB La1.2.BCG None
SRR3675524 Other lineage4.9;lineage6.3 None
SRR26399467 Other lineage2.2.1 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR4828156 HR-TB lineage2.2.1 vn
ERR4831993 MDR-TB lineage2.2.1 vn
ERR4798493 MDR-TB lineage2.2.1 None
ERR4831758 MDR-TB lineage2.2.1 vn
ERR6362540 RR-TB lineage2.2.1 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR5341330 Other lineage4.9 None
SRR26399632 Other lineage2.2.1 None
ERR4831706 HR-TB lineage2.2.1 vn
SRR3675581 Other lineage2.1;lineage4.9 None
SRR1173453 Other lineage4.4.1.1 None
SRR1710057 Other lineage2.1 None
SRR26399608 Sensitive lineage2.2.1 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR5067582 HR-TB lineage2.2.1 vn
SRR26399710 HR-TB lineage2.2.1 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR4818929 HR-TB lineage4.9 None
ERR4819932 Other lineage4.7 None
SRR5535933 Other lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR3275201 Sensitive lineage4.8 nl
ERR5162090 RR-TB lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR5073505 HR-TB lineage2.2.1 vn
SRR20969708 HR-TB lineage2.2 None
SRR26399903 HR-TB lineage2.2.1 None
SRR5067695 HR-TB lineage2.2.1 vn
SRR6797404 Sensitive lineage2.2.1 None
ERR176549 Other lineage4.3.4.2.1 None
ERR9786569 Other lineage4.8 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR11049615 HR-TB lineage2.2.1 None
ERR3797015 HR-TB lineage4.9 None
ERR4831922 MDR-TB lineage2.2.1 vn
SRR1163221 MDR-TB lineage4.1.2.1 None
ERR4830214 HR-TB lineage2.2.1 vn
ERR4832010 HR-TB lineage2.2.1 vn
SRR1173633 Other lineage4.9 None
ERR2693228 RR-TB lineage4.9 None
SRR24083619 Sensitive lineage2.2.1 None
SRR1181020 Other lineage2.2.1 None
SRR24083707 Sensitive lineage2.2.1 None
SRR5065347 Other lineage2.2.1 vn
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR3675275 Other lineage4.9 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
ERR11067638 MDR-TB lineage2.2.1 None
ERR9786656 Sensitive lineage4.1.2.1 None
SRR26936985 MDR-TB lineage2.2.1 None
ERR4817893 Other La3;lineage4.8 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR7737780 MDR-TB lineage2.2.1 None
ERR9787139 Other lineage6.3.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR11465665 Other lineage4.1.1.3 None
DRR454960 Pre-XDR-TB lineage2.2.1 None
ERR4831971 HR-TB lineage2.2.1 vn
SRR24083642 Sensitive lineage2.2.1 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR16370559 Pre-XDR-TB lineage2.2.1 None
SRR18003019 Other lineage2.2.1 None
SRR26399973 Other La3;lineage4.9 None
ERR124652 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4811565 Sensitive lineage2.2.1 cn
SRR5067613 HR-TB lineage2.2.1 vn
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR26399638 Other lineage2.2.1 None
SRR3675558 MDR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
ERR4820773 HR-TB lineage4.9 None
ERR4828629 HR-TB lineage2.2.1 vn
SRR6797665 Sensitive lineage2.2.1 None
ERR9896144 Other lineage3 None
ERR7737681 MDR-TB lineage2.2.1 None
ERR5311098 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323063 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
DRR261149 Sensitive lineage2.2.1 None
ERR4831632 Pre-XDR-TB lineage2.2.1 vn
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR5073872 Sensitive lineage2.2.1 vn
SRR6153065 Sensitive lineage2.2.1 ca
SRR6045242 Other lineage2.1;lineage4.9 None
ERR4832057 HR-TB lineage2.2.1 vn
SRR5065611 HR-TB lineage2.2.1 vn
ERR3275220 Other lineage3 nl