Rv2477c - c.948C>G


Drug resistance types
85 Sensitive 22 RR-TB 210 HR-TB 128 MDR-TB 17 Pre-XDR-TB 2 XDR-TB 195 Other
lineage Counts
lineage Count
lineage2.2.1 293
La3 2
lineage2.1;lineage4.9 19
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
32
lineage2.1;lineage4.9;lineage6.3 7
lineage4.9 77
La3;lineage2.1;lineage4.9 2
La1.2 1
La3;M.canetti;lineage2.1;lineage4.9 12
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 2
M.canetti;lineage2.1;lineage4.9 26
lineage4.1.2.1 22
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 5
La1.7;M.canetti;lineage4.9 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.7 2
lineage2.1;lineage4.9;lineage7 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
lineage4.9;lineage6.3 4
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage4.2;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
La3;lineage2.1;lineage4.9;lineage6.3 2
La3;M.canetti;lineage4.9 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2.2.1 1
M.canetti;lineage2.2.2;lineage6.2 2
La1.7.X-unk4;lineage4.9 1
lineage4 5
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.9 4
lineage4.9;lineage7 2
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.6.3;lineage4.9;lineage6.3 1
M.canetti;lineage2.2 3
lineage4.3.4.2 1
lineage4.3.4.2.1 2
lineage3 6
lineage4.1.3 2
La1.7;lineage4.9 5
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage3.1 1
lineage2.2.1.1 1
La1.7;lineage4.2 1
M.canetti;lineage2.1 1
M.canetti;lineage2.1;lineage3 1
La3;lineage4.9 2
La1.2.BCG;La1.8.1 1
lineage2.2.1;lineage4.1.2.1 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.2.1.2 1
M.canetti;lineage2.1;lineage4 1
La2;lineage2.2 1
lineage2.2 2
lineage2.1;lineage6.3 2
lineage1.1 1
lineage4.8 7
La1.8.1 2
lineage4.1.1.3 3
lineage4.8.1 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
La3;M.canetti;lineage3.1 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.4.1.1 3
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3;M.canetti;lineage4.8;lineage4.9 1
lineage2.2.1;lineage4 1
M.canetti;lineage4.2;lineage4.9 1
lineage2.1 3
La3;M.canetti;lineage2.1;lineage3.1 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La2;lineage4.9 1
lineage4.1.1.1 3
lineage4.2.2.2 1
lineage4.6.2.2 4
lineage6.3.1 3
lineage4.6.1 1
lineage4.1.2.1.1 1
lineage3.1.1 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.1 1
lineage5.2 2
lineage1.1.1 1
La1.7.1;lineage4.9 1
lineage4.3.4.1 2
lineage1.2.1.2.1 1
M.canetti;lineage2.1;lineage6.3 1
lineage1.1.2;lineage4 1
lineage4.3.2 1
M.canetti;lineage4.3.1;lineage4.9 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage2.1;lineage4.3.2;lineage4.9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage2.2.1;lineage4.1.2 1
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage4.5 1
La1;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage6 1
lineage4.1.1;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La1.7.1 1
spoligotype Counts
spoligotype Count
None 659
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR21576668 MDR-TB lineage2.2.1 None
SRR1172817 Other La3 None
SRR26936937 MDR-TB lineage2.2.1 None
SRR3675581 Other lineage2.1;lineage4.9 None
DRR454962 Pre-XDR-TB lineage2.2.1 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR13439924 MDR-TB lineage2.2.1 None
SRR7496509 Other None
ERR11067638 MDR-TB lineage2.2.1 None
SRR29093787 Other lineage2.2.1 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR4819046 Sensitive lineage2.2.1 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR29051048 HR-TB lineage2.2.1 None
SRR26399451 HR-TB lineage2.2.1 None
SRR3675494 RR-TB lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675311 Other lineage4.9 None
SRR23961549 Other La1.2 None
SRR1184294 Other lineage4.9 None
SRR26399178 HR-TB lineage2.2.1 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR26937013 Pre-XDR-TB lineage2.2.1 None
SRR1165584 Other lineage4.1.2.1 None
SRR28351288 Sensitive lineage2.2.1 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR11252664 Other lineage2.2.1 None
ERR212001 HR-TB None
SRR26400010 HR-TB lineage2.2.1 None
SRR1172857 Other None
SRR26400073 HR-TB lineage2.2.1 None
ERR9787197 Other None
ERR7911320 MDR-TB lineage2.2.1 vn
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR7911514 MDR-TB lineage2.2.1 vn
ERR4814352 Other lineage2.2.1 None
SRR10808730 Other lineage4.9 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR7737780 MDR-TB lineage2.2.1 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR1162864 Other lineage4.1.2.1 None
ERR4819422 HR-TB lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR7496523 Other lineage4.7 None
SRR1173633 Other lineage4.9 None
ERR4814742 Sensitive lineage2.2.1 gb
ERR4831765 HR-TB lineage2.2.1 vn
ERR4831770 HR-TB lineage2.2.1 vn
ERR4831809 MDR-TB lineage2.2.1 vn
ERR4831847 MDR-TB lineage2.2.1 vn
ERR4831817 HR-TB lineage2.2.1 vn
ERR4831834 HR-TB lineage2.2.1 vn
ERR4831879 HR-TB lineage2.2.1 vn
ERR4831856 MDR-TB lineage2.2.1 vn
ERR4831872 MDR-TB lineage2.2.1 vn
ERR4831922 MDR-TB lineage2.2.1 vn
ERR4831861 MDR-TB lineage2.2.1 vn
ERR4831851 HR-TB lineage2.2.1 vn
ERR4831971 HR-TB lineage2.2.1 vn
ERR4832068 HR-TB lineage2.2.1 vn
ERR4832057 HR-TB lineage2.2.1 vn
ERR4832010 HR-TB lineage2.2.1 vn
ERR4832003 HR-TB lineage2.2.1 vn
ERR4832033 HR-TB lineage2.2.1 vn
ERR4832048 MDR-TB lineage2.2.1 vn
ERR4831993 MDR-TB lineage2.2.1 vn
ERR4830243 HR-TB lineage2.2.1 vn
ERR4830204 HR-TB lineage2.2.1 vn
ERR4830223 Other lineage2.2.1 vn
ERR4830339 HR-TB lineage2.2.1 vn
ERR4830369 Sensitive lineage2.2.1 vn
ERR4830214 HR-TB lineage2.2.1 vn
ERR4830439 MDR-TB lineage2.2.1 vn
ERR4828697 MDR-TB lineage2.2.1 vn
ERR4832069 Sensitive lineage2.2.1 vn
ERR4828713 Sensitive lineage2.2.1 vn
ERR4828702 MDR-TB lineage2.2.1 vn
ERR4828731 Other lineage2.2.1 vn
ERR4828728 HR-TB lineage2.2.1 vn
ERR4828629 HR-TB lineage2.2.1 vn
ERR4828718 HR-TB lineage2.2.1 vn
ERR4808982 Sensitive lineage2.2.1 za
ERR8976106 Sensitive lineage2.2.1 None
ERR9786604 Other None
SRR3675243 Other lineage4.9 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
ERR13285192 Sensitive lineage4.9 None
DRR261095 Other lineage2.2.1 None
SRR26399329 HR-TB lineage2.2.1 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
SRR5065350 Sensitive lineage2.2.1 vn
SRR5065460 Other lineage2.2.1 vn
ERR3283042 Other lineage4.9 None
ERR4407463 HR-TB None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR4828477 Other lineage2.2.1 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR9119267 HR-TB lineage2.2.1 None
SRR1180137 Other lineage2.2.1 None
SRR5065611 HR-TB lineage2.2.1 vn
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR5065361 HR-TB lineage2.2.1 vn
SRR5065522 HR-TB lineage2.2.1 vn
SRR5065465 Sensitive lineage2.2.1 vn
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5067695 HR-TB lineage2.2.1 vn
SRR16370559 Pre-XDR-TB lineage2.2.1 None
SRR5067348 MDR-TB lineage2.2.1 vn
SRR5067448 Sensitive lineage2.2.1 vn
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR5074105 HR-TB lineage2.2.1 vn
SRR5074116 Sensitive lineage2.2.1 vn
SRR1165506 Other lineage4.1.2.1 None
SRR3675275 Other lineage4.9 None
SRR26399600 Sensitive lineage2.2.1 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR9119290 HR-TB lineage2.2.1 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR13439925 MDR-TB lineage2.2.1 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1173788 Sensitive lineage4.9 None
SRR26399608 Sensitive lineage2.2.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR24083707 Sensitive lineage2.2.1 None
ERR13289315 Sensitive lineage2.2.1 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR26399410 HR-TB lineage2.2.1 None
ERR10748418 MDR-TB lineage2.2.1 None
ERR9029390 Sensitive lineage2.2.1 None
ERR13289328 RR-TB lineage2.2.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR13288776 RR-TB lineage2.2.1 None
ERR4815604 Other None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
DRR261024 Other lineage2.2.1 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR6045053 Other lineage4 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR3675495 Other lineage2.1;lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR11049615 HR-TB lineage2.2.1 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR7737681 MDR-TB lineage2.2.1 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
DRR261098 Sensitive lineage2.2.1 None
ERR13439916 HR-TB lineage2.2.1 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR176549 Other lineage4.3.4.2 None
SRR26936997 HR-TB lineage2.2.1 None
DRR261136 Sensitive lineage2.2.1 None
SRR5341330 Other lineage4.9 None
SRR26936952 Pre-XDR-TB lineage2.2.1 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4797201 Other None
SRR28868389 Sensitive lineage2.2.1 None
SRR21733247 Sensitive lineage2.2.1 None
ERR4821053 Other lineage3 None
ERR3804169 HR-TB lineage4.1.3 None
ERR502912 Other lineage2.2.1 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR26399156 HR-TB lineage2.2.1 None
SRR26399485 HR-TB lineage2.2.1 None
ERR1034634 HR-TB lineage4.9 None
ERR13439902 HR-TB lineage2.2.1 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR29093692 MDR-TB lineage2.2.1 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR29096246 Sensitive La1.7;lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
ERR4796757 Pre-XDR-TB lineage2.2.1 in
SRR26399951 HR-TB lineage2.2.1 None
SRR29017497 HR-TB lineage2.2.1 None
SRR1184346 HR-TB lineage3.1 None
SRR26399258 MDR-TB lineage2.2.1.1 None
SRR23961559 Other La1.7;lineage4.2 None
SRR7496472 Other lineage4.9 None
SRR29056096 Sensitive lineage2.2.1 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR30182605 Sensitive lineage2.2.1 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR3804155 Other lineage4.1.2.1 None
SRR6045233 Other M.canetti;lineage4.9 None
SRR7131023 Other lineage4.1.2.1 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
ERR3797070 Other lineage4.9 None
SRR26400104 MDR-TB lineage2.2.1 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR1184381 MDR-TB None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR3675221 Other lineage4.9 None
SRR6797404 Sensitive lineage2.2.1 None
ERR4817060 Other None
ERR7911115 Pre-XDR-TB lineage2.2.1 vn
ERR6362540 RR-TB lineage2.2.1 None
ERR7911139 MDR-TB lineage2.2.1 vn
SRR26399339 MDR-TB lineage2.2.1 None
ERR7911331 MDR-TB lineage2.2.1 vn
ERR7911333 MDR-TB lineage2.2.1 vn
ERR7911484 MDR-TB lineage2.2.1 vn
ERR7737663 MDR-TB lineage2.2.1 None
SRR6044815 Other lineage4.9 None
DRR454960 Pre-XDR-TB lineage2.2.1 None
SRR26399343 HR-TB lineage2.2.1 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1181289 Other lineage2.2.1 None
ERR4828201 HR-TB lineage2.2.1 vn
ERR4828156 HR-TB lineage2.2.1 vn
ERR4828419 Other lineage2.2.1 vn
ERR4831600 MDR-TB lineage2.2.1 vn
ERR4831607 MDR-TB lineage2.2.1 vn
ERR4831645 MDR-TB lineage2.2.1 vn
ERR4831651 MDR-TB lineage2.2.1 vn
ERR4831632 Pre-XDR-TB lineage2.2.1 vn
ERR4831646 MDR-TB lineage2.2.1 vn
ERR4831845 HR-TB lineage2.2.1 None
ERR4832023 MDR-TB lineage2.2.1 None
SRR5341333 Other lineage2.1;lineage4.9 None
SRR26399413 HR-TB lineage2.2.1 None
ERR4828266 Sensitive lineage2.2.1 None
SRR29017491 Other lineage2.2.1 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR13439875 HR-TB lineage2.2.1 None
SRR26937052 Other lineage2.2.1 None
SRR5065336 MDR-TB lineage2.2.1 vn
SRR5065425 HR-TB lineage2.2.1 vn
SRR29093839 Sensitive lineage2.2.1 None
SRR16370542 MDR-TB lineage2.2.1 None
DRR261035 Sensitive lineage2.2.1 None
ERR3283036 Other lineage2.1;lineage4.9 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4819241 Other lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1173778 Other lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR5065385 HR-TB lineage2.2.1 vn
SRR26399331 Other lineage2.2.1 None
SRR5065238 HR-TB lineage2.2.1 vn
SRR5065343 Other lineage2.2.1 vn
SRR5065442 Sensitive lineage2.2.1 vn
SRR5065412 HR-TB lineage2.2.1 vn
SRR5065360 Sensitive lineage2.2.1 vn
SRR5065511 HR-TB lineage2.2.1 vn
SRR5067238 HR-TB lineage2.2.1 vn
SRR26937062 MDR-TB lineage2.2.1 None
SRR5073667 Other lineage2.2.1;lineage4.1.2.1 vn
ERR3468607 Other lineage4.9 None
SRR5073515 Sensitive lineage2.2.1 vn
SRR5073595 Sensitive lineage2.2.1 vn
SRR5073505 HR-TB lineage2.2.1 vn
SRR5073670 Sensitive lineage2.2.1 vn
SRR5073695 HR-TB lineage2.2.1 vn
SRR5073872 Sensitive lineage2.2.1 vn
SRR5073550 HR-TB lineage2.2.1 vn
SRR5073585 HR-TB lineage2.2.1 vn
SRR5073968 Sensitive lineage2.2.1 vn
SRR5073895 Sensitive lineage2.2.1 vn
SRR5073591 HR-TB lineage2.2.1 vn
SRR6046540 Other lineage2.1;lineage4.9 None
SRR26399467 Other lineage2.2.1 None
SRR26399903 HR-TB lineage2.2.1 None
ERR4811565 Sensitive lineage2.2.1 cn
SRR21676323 Sensitive lineage2.2.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9119437 MDR-TB lineage2.2.1 None
SRR18213713 HR-TB None
DRR261168 Sensitive lineage2.2.1 None
SRR26936985 MDR-TB lineage2.2.1 None
ERR4797054 Pre-XDR-TB lineage2.2.1.2 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
SRR3675214 Other lineage4.9 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR26399710 HR-TB lineage2.2.1 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR24083642 Sensitive lineage2.2.1 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR1183049 RR-TB lineage2.2 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR8665994 Other lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR26399699 Other lineage2.2.1 None
SRR26399638 Other lineage2.2.1 None
SRR7496517 Other None
SRR16151369 Sensitive lineage2.2.1 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR26399896 HR-TB lineage2.2.1 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1181020 Other lineage2.2.1 None
SRR21658536 Sensitive lineage2.2.1 None
SRR26937002 MDR-TB lineage2.2.1 None
SRR30182762 MDR-TB lineage2.2.1 None
ERR7737684 MDR-TB lineage2.2.1 None
ERR3077978 Other lineage1.1 None
ERR161034 Other lineage4.3.4.2.1 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3797015 HR-TB lineage4.9 None
ERR1023302 MDR-TB lineage3 None
SRR21713551 Other lineage2.2.1 None
SRR6789626 Other None
ERR3468544 Other lineage2.1;lineage4.9 None
ERR4799171 Pre-XDR-TB lineage4.8 None
SRR29050859 Other lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR26399419 HR-TB lineage2.2.1 None
ERR4816999 Other None
ERR3797023 HR-TB La1.8.1 None
ERR13439854 HR-TB lineage2.2.1 None
ERR4832001 HR-TB lineage2.2.1 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR4831999 MDR-TB lineage2.2.1 None
SRR29051121 Sensitive lineage2.2.1 None
ERR4811142 RR-TB None
ERR9786444 Sensitive lineage4.8 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR12708389 MDR-TB lineage4.8.1 None
SRR26399656 Sensitive lineage2.2.1 None
SRR1165423 RR-TB lineage4.1.2.1 None
SAMN02414850 Other lineage4.1.2.1 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4800195 Pre-XDR-TB lineage2.2.1 in
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
SRR29051429 Other lineage2.2.1 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR4799924 Pre-XDR-TB lineage2.2.1 in
SRR6046485 Other lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
SRR29051170 HR-TB lineage2.2.1 None
ERR9786642 Other lineage4.1.2.1 None
ERR9786843 Other None
ERR12141641 Sensitive lineage2.2.1 None
ERR2514692 Other None
SRR6153065 Sensitive lineage2.2.1 ca
SRR6789621 Other lineage4.9 None
ERR234659 Other None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR7911506 MDR-TB lineage2.2.1 vn
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR1180226 HR-TB lineage4.9 None
SRR3675539 HR-TB lineage4.9;lineage7 None
SRR3675487 Other M.canetti;lineage4.9 None
ERR4831706 HR-TB lineage2.2.1 vn
ERR4831758 MDR-TB lineage2.2.1 vn
ERR4831726 HR-TB lineage2.2.1 vn
ERR4831780 MDR-TB lineage2.2.1 vn
ERR4831737 HR-TB lineage2.2.1 vn
SRR1173453 Other lineage4.4.1.1 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR1640750 Other None
SRR3675572 Other None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR26937038 MDR-TB lineage2.2.1 None
SRR22250104 Sensitive lineage2.2.1 None
SRR3675457 Other lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR6866807 Other lineage4.9 None
SRR5065347 Other lineage2.2.1 vn
SRR26937065 MDR-TB lineage2.2.1 None
ERR10465886 Other lineage2.2.1 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR1063858 HR-TB lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR26937074 MDR-TB lineage2.2.1 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
SRR5067243 HR-TB lineage2.2.1 vn
SRR5067396 HR-TB lineage2.2.1 vn
ERR4818929 HR-TB lineage4.9 None
SRR5067582 HR-TB lineage2.2.1 vn
SRR5067613 HR-TB lineage2.2.1 vn
SRR5067409 HR-TB lineage2.2.1 vn
SRR26399239 Sensitive lineage4.9 None
SRR5067563 HR-TB lineage2.2.1 vn
SRR26937008 MDR-TB lineage2.2.1;lineage4 None
SRR5067308 Sensitive lineage2.2.1 vn
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5067240 HR-TB lineage2.2.1 vn
SRR5067665 HR-TB lineage2.2.1 vn
SRR5067697 HR-TB lineage2.2.1 vn
ERR3283040 HR-TB lineage4.9 None
SRR5067272 HR-TB lineage2.2.1 vn
SRR5067684 HR-TB lineage2.2.1 vn
SRR5067313 HR-TB lineage2.2.1 vn
SRR26399397 Sensitive lineage2.2.1 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1196583 Other lineage4.9 None
SRR5073603 MDR-TB lineage2.2.1 vn
SRR5073802 Sensitive lineage2.2.1 vn
SRR5074065 HR-TB lineage2.2.1 vn
SRR5074179 Other lineage2.2.1 vn
SRR5074168 HR-TB lineage2.2.1 vn
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
SRR3675507 Other lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR1710057 Other lineage2.1 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR11972306 Pre-XDR-TB lineage2.2.1 None
SRR16370540 MDR-TB lineage2.2.1 None
ERR8699776 RR-TB lineage2.2.1 None
SRR26399973 Other La3;lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR5162090 RR-TB lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR3416776 Other lineage2.1 None
DRR261149 Sensitive lineage2.2.1 None
SRR1163221 MDR-TB lineage4.1.2.1 None
ERR2693228 RR-TB lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR1166821 Other lineage4.1.2.1 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR22251917 MDR-TB lineage2.2.1 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR24083619 Sensitive lineage2.2.1 None
ERR13439915 HR-TB lineage2.2.1 None
SRR1196494 MDR-TB None
ERR13439923 MDR-TB lineage2.2.1 None
SRR3675269 RR-TB lineage4.9 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR22249688 Sensitive lineage2.2.1 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR1184312 Other lineage2.2.1 None
SRR29050830 MDR-TB lineage2.2.1 None
SRR29016933 HR-TB lineage2.2.1 None
SRR26399867 Sensitive lineage2.2.1 None
ERR12015083 Other lineage4.8 None
SRR29050798 Sensitive lineage2.2.1 None
SRR29096485 RR-TB lineage2.2.1 None
SRR26399217 HR-TB lineage2.2.1 None
ERR176793 Other lineage4.1.1.1 None
SRR29016910 HR-TB lineage2.2.1 None
ERR3283030 HR-TB lineage4.9 None
ERR2513470 Other lineage4.2.2.2 None
SRR1173384 Other lineage4.9 None
SRR6046066 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
ERR2027263 Other lineage4 None
ERR2514327 HR-TB lineage4.8 None
SRR21576648 RR-TB lineage2.2.1 None
SRR26399402 HR-TB lineage2.2.1 None
SRR6045347 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
SRR29096879 Sensitive lineage4.9 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR3804162 Sensitive lineage6.3.1 None
ERR7339132 HR-TB lineage2.2.1 None
SRR22251137 HR-TB lineage2.2.1 None
ERR11465665 Other lineage4.1.1.3 None
ERR11489020 MDR-TB lineage2.2.1 None
ERR4811105 HR-TB None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2517514 Sensitive lineage4.8 None
ERR4810741 HR-TB None
ERR6358755 Other lineage4.6.1 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4797588 MDR-TB lineage3 None
ERR4811311 Other None
SRR29051154 MDR-TB lineage2.2.1 None
ERR9786711 Sensitive lineage4.6.2.2 None
SRR1196474 Other lineage3.1.1 None
SRR1196546 Other lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR9786526 Other lineage4.1 None
SRR26399586 Sensitive lineage2.2.1 None
SRR29231479 RR-TB lineage4.9 None
ERR3797043 Sensitive lineage4.9 None
ERR553132 MDR-TB lineage4.1.2.1 None
ERR9786694 Other lineage4.1.2.1 None
ERR4832055 MDR-TB lineage2.2.1 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR29056284 Sensitive lineage2.2.1 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR4872094 MDR-TB lineage5.2 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9786421 Other lineage4.1.2.1 None
ERR8976043 HR-TB lineage2.2 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
SRR7070434 Sensitive lineage2.2.1 None
SRR20969626 Sensitive lineage2.2.1 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR24083622 Sensitive lineage2.2.1 None
SRR20969708 HR-TB lineage2.2.1 None
SRR1172728 RR-TB La3 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR29441074 Other lineage2.2.1 None
ERR13258402 MDR-TB lineage2.2.1 None
SRR14066533 Sensitive lineage1.1.1 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1173767 MDR-TB lineage4.4.1.1 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR6458423 HR-TB lineage2.2.1 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR13439866 HR-TB lineage2.2.1 None
SRR6325447 HR-TB lineage4.1.1.1 None
ERR4828687 MDR-TB lineage2.2.1 None
SRR10305744 Sensitive lineage2.2.1 None
SRR3675248 Other lineage4.9 None
ERR9786569 Other lineage4.8 None
ERR9786525 Other lineage4 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR9786656 Sensitive lineage4.1.2.1 None
SRR26399530 MDR-TB lineage2.2.1 None
ERR9786611 HR-TB lineage4.1.3 None
ERR1063862 HR-TB lineage4.9 None
ERR9787223 Sensitive lineage6.3.1 None
SRR26399948 Other lineage2.2.1 None
SRR3675236 Other None
ERR13439901 HR-TB lineage2.2.1 None
ERR3283044 Other lineage4 None
ERR6326069 Pre-XDR-TB lineage4.3.4.1 None
SRR29093599 RR-TB lineage2.2.1 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR7535086 Other None
SRR6797665 Sensitive lineage2.2.1 None
ERR9119219 HR-TB lineage2.2.1 None
SRR13861241 HR-TB lineage4.9 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR29440732 MDR-TB lineage2.2.1 None
SRR1510066 Other lineage1.2.1.2.1 None
ERR4817893 Other lineage4.8 None
ERR9786682 Other lineage4.1.2.1 None
ERR13093822 Sensitive lineage2.2.1 None
SRR1165699 Other lineage4.9 None
ERR13285191 Sensitive lineage4.9 None
SRR1791696 Other La1.8.1 None
SRR26399245 HR-TB lineage2.2.1 None
SRR26937064 MDR-TB lineage2.2.1 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR4816466 HR-TB lineage4.9 None
SRR18003019 Other lineage2.2.1 None
SRR26399632 Other lineage2.2.1 None
ERR4816585 Other lineage2.2.1 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5341332 Pre-XDR-TB lineage3 None
ERR4817692 HR-TB lineage1.1.2;lineage4 None
ERR1063849 HR-TB lineage4.9 None
ERR5917710 Other lineage4.1.2.1 None
ERR6358991 HR-TB None
ERR772255 MDR-TB lineage4.3.2 None
DRR130100 MDR-TB lineage2.2.1 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4811075 Other None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR29053605 Sensitive lineage2.2.1 None
ERR1063846 HR-TB lineage4.9 None
ERR9786617 Other lineage4.1.1.1 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR20969617 Sensitive lineage2.2.1 None
ERR13439882 HR-TB lineage2.2.1 None
ERR4820854 Other lineage4.1.2.1 None
ERR4819932 Sensitive lineage4.7 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR4815441 HR-TB lineage4.9 None
SRR26399981 HR-TB lineage2.2.1 None
ERR9896144 Other lineage3 None
ERR9787139 Other lineage6.3.1 None
ERR990545 Other lineage3 None
SRR6044942 HR-TB lineage4.9 None
ERR13266225 MDR-TB lineage2.2.1;lineage4.1.2 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR1023525 HR-TB La1.7;lineage4.9 None
SRR12142341 HR-TB lineage2.2.1 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR2229143 RR-TB lineage4.9 None
SRR12006550 Sensitive None
SRR13423544 Other lineage4.5 None
SRR12416840 MDR-TB lineage4.9 None
SRR13861305 Other lineage4.9 None
SRR13861332 Other lineage4.9 None
SRR13861510 Other lineage4.9 None
SRR26399541 HR-TB lineage2.2.1 None
SRR23961542 Other La1;lineage4.9 None
SRR30182645 MDR-TB lineage2.2.1 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR29096659 Sensitive lineage4.9 None
ERR9117721 HR-TB None
ERR9786627 Other lineage4.1.2.1 None
ERR9787165 Other lineage6 None
SRR26399235 HR-TB lineage2.2.1 None
ERR4819877 HR-TB lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
SRR21732345 HR-TB lineage2.2.1 None
ERR7737736 MDR-TB lineage2.2.1 None
ERR4817731 HR-TB lineage4.9 None
ERR13439913 HR-TB lineage2.2.1 None
ERR4816478 HR-TB lineage4 None
SRR20970016 Other lineage2.2.1 None
SRR20969677 HR-TB lineage2.1 None
SRR29051401 Other lineage2.2.1 None
SRR30182434 MDR-TB lineage2.2.1 None
ERR9119298 Sensitive lineage2.2.1 None
SRR10040323 MDR-TB lineage2.2.1 None
SRR6325442 HR-TB lineage4.1.1;lineage4.9 None
ERR9119268 Other lineage2.2.1 None
ERR9117709 Other None
ERR176766 HR-TB lineage2.1;lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR9119362 HR-TB lineage2.2.1 None
SRR3675549 Other lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR7240492 HR-TB La1.7.1 None
ERR5336148 Other lineage2.1;lineage6.3 None