Rv0676c - c.1308C>G
Drug resistance types
4 Sensitive
2 RR-TB
93 HR-TB
0 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
19 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 2 |
| lineage3.1 | 1 |
| 82 | |
| La2 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4 | 13 |
| lineage4.9 | 3 |
| lineage4;lineage3.1 | 1 |
| lineage2 | 1 |
| lineage3 | 2 |
| lineage4.3.4 | 1 |
| La3 | 1 |
| lineage2.2.1 | 3 |
| lineage2.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3 | 1 |
| lineage4.8 | 1 |
| lineage4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 119 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR294248 | HR-TB | None | ERR294266 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR323036 | HR-TB | None | ERR5311099 | HR-TB | None | ERR323063 | HR-TB | None | ERR5311081 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323038 | HR-TB | None | ERR323041 | HR-TB | None | ERR323055 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323053 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR323108 | HR-TB | lineage4 | None | ERR1063858 | HR-TB | None | ERR1063862 | HR-TB | None | ERR3283017 | HR-TB | None | ERR1063859 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3283047 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797036 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797017 | Other | None | ERR3797043 | HR-TB | None | ERR4188350 | HR-TB | None | ERR3797064 | Sensitive | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797061 | Other | None | ERR3797063 | HR-TB | None | ERR3797083 | HR-TB | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4407463 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR6359045 | HR-TB | None | ERR4796929 | Sensitive | lineage4 | None | ERR6358837 | HR-TB | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4800341 | Other | lineage3 | None | ERR6358979 | Other | None | ERR702404 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736835 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736867 | HR-TB | None | ERR9119669 | HR-TB | None | ERR8976043 | HR-TB | None | SRR1167384 | Other | lineage4 | None | SRR12416824 | HR-TB | None | SRR1169249 | Other | La3 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1169306 | Other | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | ERR176778 | HR-TB | None | SRR3675488 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR176779 | HR-TB | None | SRR3675482 | HR-TB | None | SRR3675486 | HR-TB | None | ERR176643 | HR-TB | None | SRR3675501 | HR-TB | None | SRR3675222 | Other | None | ERR181824 | HR-TB | lineage4 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR176568 | Other | lineage4.3 | None | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | ERR4815079 | RR-TB | lineage3 | None | SRR3675383 | HR-TB | None | SRR3675545 | HR-TB | None | ERR176751 | HR-TB | None | ERR212033 | HR-TB | None | ERR4817037 | Other | lineage4.9 | None | ERR4816466 | HR-TB | None | ERR4817060 | RR-TB | None | SRR3675574 | HR-TB | None | SRR3675558 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | SRR3742665 | HR-TB | None | ERR4818607 | Sensitive | lineage4.9 | None | ERR4817735 | Other | lineage4.8 | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR234659 | HR-TB | None | ERR4818347 | Other | lineage4.1.2 | None | ERR4816656 | HR-TB | None | SRR5341333 | HR-TB | None | ERR2514692 | Other | None | SRR5341302 | HR-TB | None | ERR2693239 | HR-TB | None | ERR2446563 | Other | lineage2.2.1 | nl | SRR6045519 | HR-TB | None | SRR6045526 | HR-TB | None | ERR278594 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6045399 | Other | None | SRR6325444 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6325447 | HR-TB | None | SRR6046644 | HR-TB | None |
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