Rv0006 - c.1896G>C


Drug resistance types
11 Sensitive 1 RR-TB 82 HR-TB 4 MDR-TB 5 Pre-XDR-TB 0 XDR-TB 49 Other
lineage Counts
lineage Count
lineage7;lineage2.2.1.2 1
La1.7.1 1
84
lineage2.2.1 7
lineage2.2 6
lineage4.9 6
lineage6.3;lineage4.9;lineage2.1 1
lineage4 21
lineage4.3 1
lineage4.2;La1.7 1
lineage4.9;lineage4.6.3 1
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage3 1
lineage4.8 1
lineage4.1 1
lineage4.6.2.2 2
lineage4.8.1 1
La2 1
lineage6.1.1 2
La1.2 2
lineage3.1.2 1
lineage4.3.4 1
La3 1
lineage3.1.2.2;lineage3.1.2.1 1
lineage2.2.1.2 1
lineage2.2.1.1 3
lineage1.2.1.2 1
lineage4.3.4.1 1
spoligotype Counts
spoligotype Count
None 152
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR1792478 HR-TB La1.7.1 None
SRR14782405 HR-TB None
SRR20969731 Other lineage2.2.1 None
ERR181887 HR-TB None
SRR20969708 HR-TB lineage2.2 None
SRR20970016 Other lineage2.2 None
SRR26399490 Sensitive lineage4.9 None
SRR23961558 Other lineage6.3;lineage4.9;lineage2.1 None
ERR181824 HR-TB lineage4 None
SRR3675270 HR-TB None
ERR176568 Other lineage4.3 None
SRR23961559 Other lineage4.2;La1.7 None
SRR26159047 Other lineage4.9;lineage4.6.3 None
ERR176778 HR-TB None
ERR176779 HR-TB None
SRR3675502 Other None
ERR158583 HR-TB None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
SRR3675234 Other None
SRR3675265 Other lineage4 None
ERR176651 HR-TB None
ERR176643 HR-TB None
ERR176740 HR-TB None
ERR176751 HR-TB None
ERR212033 HR-TB None
SRR3675550 Other None
ERR212125 HR-TB lineage4 None
ERR212034 HR-TB None
ERR4816656 HR-TB None
ERR212121 HR-TB None
SRR3675571 HR-TB None
ERR4816466 HR-TB None
ERR4818929 HR-TB None
ERR4819462 Other lineage4 None
ERR4818536 Other lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR5341313 HR-TB None
SRR5341418 Other None
ERR2514327 HR-TB lineage4.8 None
SRR5341432 HR-TB lineage4 None
ERR6359082 Other lineage4.9 None
SRR5341330 HR-TB None
ERR2693231 Other None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR5341470 HR-TB None
SRR5535933 HR-TB None
ERR2693230 Other None
ERR2693257 Other None
ERR2693254 Other None
SRR6044876 Sensitive lineage4 None
SRR6045706 Sensitive lineage4 None
SRR6045053 Other None
SRR6045233 HR-TB None
SRR6045217 Other lineage4 None
SRR6046253 HR-TB lineage4.9 None
SRR6046210 Other lineage4 None
SRR6045399 Other None
SRR6046046 Other None
SRR6046460 HR-TB None
SRR6046362 HR-TB None
SRR6046397 Other None
SRR6046644 HR-TB None
SRR6046482 HR-TB None
SRR6046878 HR-TB lineage4 None
SRR6046824 HR-TB None
SRR6789624 MDR-TB lineage4.1 None
ERR4831545 Pre-XDR-TB lineage2.2 None
ERR4831117 HR-TB None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR4831546 HR-TB lineage2.2 None
ERR323039 HR-TB None
ERR11465604 HR-TB lineage4.8.1 None
ERR294266 HR-TB None
ERR502889 Other None
SRR8217918 HR-TB None
SRR6832787 RR-TB lineage2.2.1 None
ERR502524 HR-TB La2 None
ERR323108 HR-TB lineage4 None
ERR323053 HR-TB None
ERR323045 HR-TB None
ERR3283014 HR-TB None
ERR067681 HR-TB None
ERR1063859 HR-TB None
ERR133986 HR-TB None
ERR067699 HR-TB lineage4 None
ERR1063862 HR-TB None
ERR1063858 HR-TB None
ERR3283031 HR-TB None
ERR3283028 Other None
ERR3283024 Other None
ERR3283032 HR-TB None
ERR3283047 HR-TB None
ERR3283055 HR-TB None
ERR3283058 Other lineage4.9 None
ERR3439432 Other None
ERR3283057 HR-TB lineage4 None
ERR3797044 Other None
ERR3797017 Other None
ERR3797046 HR-TB None
ERR3445503 HR-TB None
ERR3797014 Other None
ERR3797043 HR-TB None
ERR4769452 HR-TB None
ERR3797065 MDR-TB lineage4 None
ERR3797061 Other None
ERR3797063 HR-TB None
ERR3797064 Sensitive None
ERR3797087 Sensitive lineage4 None
ERR3799304 Other lineage6.1.1 None
ERR403298 HR-TB lineage4 None
ERR4178226 Sensitive lineage4 None
ERR3797048 HR-TB None
ERR3797079 Sensitive lineage4 None
ERR4769497 HR-TB La1.2 None
ERR4769450 HR-TB None
ERR4769457 Other lineage4.9 None
ERR4798406 HR-TB None
ERR4798648 HR-TB lineage3.1.2 None
ERR4799025 Pre-XDR-TB None
ERR6198317 Other La1.2 None
ERR4799513 HR-TB lineage2.2 None
ERR4811493 HR-TB None
ERR6359045 HR-TB None
ERR6358991 HR-TB None
ERR736865 HR-TB None
ERR6866410 Sensitive None
ERR702404 HR-TB None
ERR736817 HR-TB lineage4.3.4 None
ERR6865502 Sensitive lineage4 None
ERR736875 HR-TB lineage4 None
ERR7821163 Other lineage2.2.1 None
ERR7911670 Pre-XDR-TB lineage2.2 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR9787014 Other lineage6.1.1 None
ERR9786843 Other None
SRR1180270 Other lineage2.2.1 None
SRR1167384 Other lineage4 None
SRR1169249 Other La3 None
SRR1169306 Other None
SRR1172310 HR-TB None
SRR1174897 HR-TB None
SRR1180172 Other lineage2.2.1 None
ERR987722 HR-TB None
ERR987729 HR-TB lineage3.1.2.2;lineage3.1.2.1 None
SRR1175127 Sensitive lineage2.2.1.2 None
SRR1180147 Other lineage2.2.1.1 None
SRR1183144 Other lineage2.2.1 None
SRR1183106 Other lineage2.2.1.1 None
SRR1184024 Other lineage2.2.1.1 None
SRR12006550 Other lineage1.2.1.2 None
SRR13583478 HR-TB lineage4.3.4.1 None