EBG00000313339 - n.387C>T
Drug resistance types
17 Sensitive
1 RR-TB
15 HR-TB
3 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
19 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 21 |
| 7 | |
| lineage4.1.2.1 | 1 |
| lineage4 | 1 |
| lineage4.3 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.8 | 1 |
| lineage3 | 8 |
| lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage2.2.1.2 | 1 |
| lineage2.2.1 | 3 |
| lineage1.1.2 | 1 |
| lineage4.1.2 | 2 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.5 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| La1;lineage4.9 | 1 |
| lineage1.1.3.1 | 1 |
| lineage2.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 58 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR10809074 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR4797201 | Other | None | ERR553132 | MDR-TB | lineage4.1.2.1 | None | ERR3273109 | HR-TB | lineage4 | None | ERR867542 | HR-TB | lineage4.3 | None | SRR5341453 | Other | lineage4.9 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR3675447 | Other | lineage3 | None | SRR3675452 | Other | lineage3 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675508 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4797054 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR6358979 | Other | lineage4.9 | None | ERR323107 | Sensitive | lineage4.9 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR12416824 | HR-TB | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR3675556 | Other | lineage3 | None | SRR3675526 | Sensitive | lineage3 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR5341467 | Other | lineage4.9 | None | SRR12708416 | Sensitive | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR234659 | Other | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR16156817 | Other | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR4800341 | Other | None | SRR6045219 | HR-TB | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR6511621 | Sensitive | lineage4.9 | None | SRR3675575 | Sensitive | lineage3 | None | ERR4812155 | Other | lineage4.9 | None | SRR5341332 | Pre-XDR-TB | lineage3 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR212001 | HR-TB | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR1063896 | Sensitive | None | SRR3675287 | Other | lineage3 | None | SRR5341300 | HR-TB | lineage4.9 | None |
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