lineage | Count |
---|---|
30 | |
lineage4 | 64 |
lineage1.1.3.1 | 1 |
lineage4.3.4.1 | 1 |
lineage2.2.1 | 7 |
La1.8.1 | 2 |
lineage4.9 | 21 |
lineage4.1 | 1 |
lineage4.3.4.2.1 | 2 |
lineage3 | 9 |
lineage4.1.1 | 1 |
lineage3.1.3 | 1 |
lineage4.1.2.1 | 1 |
lineage4.1.2 | 4 |
lineage4.3.2.1 | 2 |
lineage4.2.1 | 2 |
lineage1.1.2 | 2 |
lineage4.8 | 1 |
lineage1.2.2.2 | 1 |
lineage2 | 1 |
lineage4.5 | 1 |
spoligotype | Count |
---|---|
None | 155 |
ID | Drug resistance | Lineage | Country iso2 | ERR6358979 | Other | None | ERR702404 | HR-TB | None | ERR6866022 | Other | None | ERR6866410 | Sensitive | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR736872 | Sensitive | lineage4 | None | ERR736834 | Sensitive | lineage4 | None | SRR1158918 | Sensitive | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR12416824 | HR-TB | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR1791864 | Other | La1.8.1 | None | SRR14801749 | Sensitive | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675287 | Other | lineage3 | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | ERR4815550 | Other | lineage4 | None | SRR3675526 | Sensitive | lineage3 | None | SRR3675447 | Other | lineage3 | None | SRR3675318 | Other | lineage4.9 | None | SRR3675452 | Other | lineage3 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | SRR3675556 | Other | lineage3 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | ERR212001 | HR-TB | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR234659 | HR-TB | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | SRR3675575 | Sensitive | lineage3 | None | ERR553132 | MDR-TB | lineage4.1.2.1 | None | SRR4035752 | HR-TB | lineage4.1.2 | None | ERR4818347 | Other | lineage4.1.2 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341453 | Sensitive | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | SRR5341387 | Other | lineage4 | None | ERR2512770 | Other | lineage4.2.1 | None | SRR5341368 | MDR-TB | lineage1.1.2 | None | SRR5341300 | Other | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR6045503 | HR-TB | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341467 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341332 | Pre-XDR-TB | lineage3 | None | SRR5341333 | HR-TB | None | SRR5341461 | Sensitive | lineage4 | None | ERR2517475 | Other | lineage4 | None | SRR6045555 | HR-TB | None | SRR6045706 | Sensitive | lineage4 | None | SRR6046133 | HR-TB | None | SRR6511621 | HR-TB | None | SRR6045892 | Sensitive | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045045 | Other | lineage2.2.1 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046611 | HR-TB | lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR4831638 | Sensitive | None | ERR502943 | HR-TB | None | SRR7535082 | Sensitive | lineage4 | None | ERR1035122 | Sensitive | None | ERR323107 | Other | lineage4 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323066 | Sensitive | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR133825 | Sensitive | lineage4 | None | ERR349264 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363445 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797036 | HR-TB | None | ERR400320 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4024991 | Other | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4797313 | HR-TB | None | ERR4797264 | Sensitive | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4798099 | Other | None | ERR4797474 | Other | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4798431 | HR-TB | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4800341 | Other | lineage3 | None | ERR4811030 | Sensitive | None | ERR4812155 | Sensitive | None |
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