Rv0001 - c.750C>G
Drug resistance types
8 Sensitive
25 RR-TB
105 HR-TB
100 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
142 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 108 |
| La3;M.canetti;lineage2.1;lineage4.9 | 12 |
| lineage4.1.2.1 | 6 |
| lineage2.1;lineage4.9 | 17 |
| lineage2.1;lineage4.3.2 | 1 |
| La1;lineage4.1.2 | 1 |
| M.canetti;lineage2.1 | 1 |
| lineage4.8 | 2 |
| M.canetti;lineage2.1;lineage6.3 | 2 |
| M.canetti;lineage2.1;lineage4.9 | 26 |
| lineage2.1;lineage4.9;lineage6.3 | 11 |
| lineage4.3.3 | 3 |
| La3;lineage4.9 | 9 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | 1 |
| lineage1.1 | 1 |
| La1.7.1 | 1 |
| La1.7;M.canetti;lineage4.9 | 4 |
| lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage2.2 | 3 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 6 |
| La1.7;lineage4.9 | 10 |
| lineage1.1.3.1 | 1 |
| 19 | |
| lineage1.1.2;lineage4 | 1 |
| lineage3 | 4 |
| lineage2.2.1.2 | 1 |
| La3;lineage4.8 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.8;lineage4.9 | 2 |
| lineage4.3.4.2.1 | 5 |
| lineage2.1;lineage6.3 | 2 |
| lineage2.2.1 | 14 |
| M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | 1 |
| La1.7;lineage4.9;lineage7 | 2 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 4 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 5 |
| La2;lineage4.9 | 1 |
| lineage4 | 4 |
| lineage4.9;lineage6.1.3 | 1 |
| La3;M.canetti;lineage4.8;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 4 |
| M.canetti;lineage4.3.1;lineage4.9 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| La3 | 1 |
| lineage4.1.2 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| La1.7;lineage4.2 | 1 |
| La3;M.canetti;lineage3.1 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| La3;M.canetti;lineage4.9 | 2 |
| La3;lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.1.1.2 | 1 |
| lineage6.3.1 | 1 |
| M.canetti;lineage2.1;lineage4 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | 2 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La2;lineage2.2 | 1 |
| lineage2.2.2 | 2 |
| La3;M.canetti;lineage2.1;lineage3.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| lineage2.1 | 3 |
| lineage4.9;lineage6.3 | 3 |
| lineage1.1.2 | 2 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage4.1.3 | 2 |
| lineage1;lineage4.9 | 1 |
| lineage4.6.3;lineage4.9 | 2 |
| lineage4.3.2.1 | 1 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 2 |
| lineage4.3.2 | 1 |
| M.canetti;lineage2.1;lineage4.1.2.1 | 1 |
| lineage4.9;lineage7 | 1 |
| La1.7.1;lineage4.9 | 1 |
| La1.7 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La3;lineage2 | 1 |
| lineage4.9;lineage9 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | 1 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.6.2.2 | 1 |
| M.canetti;lineage2.1;lineage3 | 1 |
| La3;lineage4 | 1 |
| La1.2.BCG | 1 |
| lineage4.3.4 | 1 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| lineage4.2;lineage4.9 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| La3;lineage1.1.2 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.2 | 1 |
| La1.2.BCG;La1.8.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage3.1 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| M.canetti;lineage1 | 1 |
| lineage4.1.1.3 | 1 |
| La1;lineage4.9 | 1 |
| lineage3.1.1 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 387 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR13861400 | Other | lineage4.9 | None | ERR323055 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR1162864 | MDR-TB | lineage4.1.2.1 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR772255 | MDR-TB | lineage2.1;lineage4.3.2 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | SRR10808730 | Other | lineage4.9 | None | ERR323041 | MDR-TB | M.canetti;lineage2.1 | None | ERR2229542 | Other | lineage4.8 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | ERR3468607 | RR-TB | lineage4.9 | None | ERR4188350 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR5908228 | RR-TB | lineage4.3.3 | None | SRR3675508 | MDR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR3675320 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR3077978 | RR-TB | lineage1.1 | None | ERR4819241 | Other | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR7240492 | MDR-TB | La1.7.1 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | SRR3675464 | MDR-TB | lineage2.1;lineage4.9;lineage6.3;lineage8 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR5341469 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR3675554 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | SRR1184381 | MDR-TB | None | ERR9786604 | Other | None | ERR4815604 | Other | None | ERR9117709 | Other | None | SRR6789626 | Other | None | SRR3675236 | Other | None | ERR4188342 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1196583 | Other | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | ERR278594 | MDR-TB | lineage2.1;lineage4.9 | None | ERR4817692 | MDR-TB | lineage1.1.2;lineage4 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR4800341 | HR-TB | lineage3 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR4817893 | Other | La3;lineage4.8 | None | ERR2514390 | Sensitive | lineage3.1.2.1;lineage4.9 | None | ERR4024991 | HR-TB | lineage4.8;lineage4.9 | None | ERR2693242 | RR-TB | lineage2.1;lineage4.9 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | ERR294248 | MDR-TB | lineage2.1;lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR5311101 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675558 | MDR-TB | M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR3675561 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR7535082 | Other | lineage4.9 | None | ERR3283031 | Other | La3;lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR6325448 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR3675545 | RR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR3797016 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6045526 | Other | lineage4.9 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR5341333 | HR-TB | lineage2.1;lineage4.9 | None | SRR1173778 | Other | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR6046066 | Other | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR3283016 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR323064 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR038268 | MDR-TB | La3;M.canetti;lineage4.8;lineage4.9 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | SRR6789621 | Other | lineage4.9 | None | SRR3675486 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR5341308 | HR-TB | lineage4.9 | None | SRR23961558 | RR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR3797063 | Other | La3;lineage4.9 | None | ERR9119138 | RR-TB | M.canetti;lineage4.3.1;lineage4.9 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR5311096 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR323036 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR1035122 | HR-TB | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | SRR1172951 | Other | lineage4.9 | None | ERR6358837 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR4816478 | HR-TB | lineage4 | None | SRR1172728 | RR-TB | La3 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311099 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR4818347 | Other | lineage4.1.2 | None | SRR1196546 | Other | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR13861332 | Other | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR3675311 | Other | lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | ERR323033 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR3283021 | MDR-TB | lineage4.9 | None | ERR323054 | MDR-TB | La3;M.canetti;lineage3.1 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR736856 | HR-TB | lineage4.9 | None | SRR3675568 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR502511 | HR-TB | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR181824 | MDR-TB | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | ERR11252664 | Other | lineage2.2.1 | None | SRR1640750 | RR-TB | None | SRR1184372 | MDR-TB | None | ERR11252736 | Other | lineage4.9 | None | SRR18213713 | HR-TB | None | ERR212001 | HR-TB | None | ERR9787197 | Other | None | SRR28119805 | Other | lineage4.9 | None | ERR6866807 | RR-TB | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | ERR2693229 | RR-TB | La3;M.canetti;lineage4.9 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR6325445 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR176766 | MDR-TB | lineage2.1;lineage4.9 | None | SRR3675275 | Other | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR4818252 | HR-TB | lineage4.1.1.2 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR3675549 | Other | lineage4.9 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR2693239 | RR-TB | M.canetti;lineage2.1;lineage4 | None | SRR6046046 | Other | lineage4.9 | None | ERR4798099 | HR-TB | lineage4.9 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR702405 | HR-TB | lineage4.9 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | SRR3675322 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR18910194 | HR-TB | lineage2.2.2 | None | ERR323034 | MDR-TB | La3;M.canetti;lineage2.1;lineage3.1 | None | SRR6046878 | Other | lineage4.9 | None | ERR124652 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR4188247 | HR-TB | lineage4.9 | None | ERR5311100 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR124642 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR702406 | Other | lineage2.1 | None | ERR323063 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR3283044 | Other | lineage4 | None | SRR3675444 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311089 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR12142341 | HR-TB | lineage2.1 | None | ERR323047 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR3675506 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR386953 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311078 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR323066 | HR-TB | lineage4.9 | None | ERR124636 | HR-TB | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR6785227 | Other | lineage2.2.1 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323058 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR1873393 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | SRR6511621 | HR-TB | lineage4.9 | None | ERR5311082 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | SRR3675481 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4815441 | HR-TB | lineage4.9 | None | SRR069989 | HR-TB | lineage2.2.2 | None | SRR6325442 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | SRR6046210 | Other | lineage4.9 | None | SRR3675585 | HR-TB | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR1023295 | MDR-TB | M.canetti;lineage2.1;lineage4.1.2.1 | None | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | ERR176779 | HR-TB | lineage4.9 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1184294 | Other | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR1196566 | Other | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR6045948 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | ERR3283014 | Other | La3;lineage4.9 | None | SRR10809074 | HR-TB | lineage4.9 | None | SRR3675518 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR4830353 | HR-TB | La1.7 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR6044875 | Other | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR20969677 | HR-TB | La3;lineage2 | None | SRR3675450 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR4797184 | HR-TB | lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR3675494 | RR-TB | lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR5311102 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4797588 | MDR-TB | lineage3 | None | SRR5341467 | Other | lineage4.9 | None | ERR3283017 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | None | ERR294266 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR126608 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | SRR3675515 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675243 | MDR-TB | lineage4.9 | None | SRR6045952 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR5311083 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311090 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | ERR736834 | HR-TB | lineage4.9 | None | ERR6866022 | HR-TB | lineage4.8;lineage4.9 | None | ERR473314 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR736863 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR9786645 | Other | lineage4.6.2.2 | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR4814536 | MDR-TB | M.canetti;lineage2.1;lineage3 | None | ERR323038 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR9119096 | RR-TB | lineage4.3.3 | None | ERR3283028 | Other | La3;lineage4 | None | SRR7496509 | Other | None | ERR9786671 | Other | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | SRR1173363 | Other | None | ERR234659 | HR-TB | None | ERR2514692 | Other | None | SRR1172857 | Other | None | ERR4407463 | HR-TB | None | ERR4816999 | Other | None | SRR28044873 | Pre-XDR-TB | lineage3 | None | ERR323040 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR1035239 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | SRR3675507 | RR-TB | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR8976043 | MDR-TB | lineage2.1;lineage2.2;lineage6.3 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR6046295 | MDR-TB | lineage4.2;lineage4.9 | None | SRR6046514 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | ERR5311081 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR3797069 | Other | lineage4.9 | None | ERR5162090 | RR-TB | lineage4.9 | None | ERR124651 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR5311098 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | SRR5341300 | HR-TB | lineage4.9 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR5341313 | Other | La1.7;lineage4.9;lineage7 | None | SRR6046644 | MDR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR9119669 | MDR-TB | lineage4.9 | None | ERR1873396 | Pre-XDR-TB | M.canetti;lineage2.2 | None | SRR1184312 | Other | lineage2.2.1 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR323060 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR176658 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR2513470 | Other | lineage4.2.2.2 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR161033 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1184346 | HR-TB | lineage3.1 | None | ERR4816470 | HR-TB | lineage3 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR3283032 | Other | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR4816551 | MDR-TB | lineage4.1.1.3 | None | SRR7496472 | Other | lineage4.9 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR1196474 | Other | lineage3.1.1 | None | ERR323062 | HR-TB | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR176793 | Other | lineage4.1.1.1 | None | SRR5341387 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | SRR3675235 | HR-TB | lineage4.9 | None | ERR2229143 | RR-TB | lineage4.9 | None | ERR3797070 | Other | lineage4.9 | None | ERR11465015 | Sensitive | lineage4.3.4.2.1 | None | SRR3675221 | Other | lineage4.9 | None | ERR126600 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR6045290 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR126618 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | ERR4817731 | HR-TB | lineage4.9 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR4814352 | Other | lineage2.2.1 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | ERR3283042 | HR-TB | lineage4.9 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR19295647 | HR-TB | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None |
|---|
