EBG00000313339 - n.1306G>T
Drug resistance types
13 Sensitive
3 RR-TB
14 HR-TB
10 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
75 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1.1 | 3 |
| lineage1.1.2;lineage4.8 | 1 |
| La3;lineage4.9 | 1 |
| lineage3 | 1 |
| lineage4.9;lineage6.3 | 5 |
| lineage4.8 | 14 |
| La3 | 2 |
| lineage4.9 | 21 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| La3;lineage2.1;lineage4.9 | 2 |
| lineage4.1;lineage4.8 | 2 |
| 12 | |
| lineage4.1.2.1 | 7 |
| lineage6.1.3 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| La3;lineage2 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 4 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage4.4.1.1 | 1 |
| lineage4.6.2.2 | 3 |
| La3;lineage2.2.1 | 1 |
| lineage3.1.1 | 1 |
| lineage2.1;lineage4.9 | 5 |
| lineage4.3.4.1 | 1 |
| La3;lineage4.8 | 1 |
| lineage2.1 | 2 |
| lineage4.3.4.2.1 | 2 |
| lineage2.2.1;lineage4.9 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage4.6.1.1 | 1 |
| lineage6.3.1 | 1 |
| lineage2.2.1 | 4 |
| lineage2.2 | 2 |
| lineage2.2.1.1 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.7;lineage4.8 | 1 |
| lineage3.1 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 3 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.2;lineage4.9 | 1 |
| La3;lineage2.2.2 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 119 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR176793 | Other | lineage4.1.1.1 | None | ERR2512509 | Sensitive | lineage1.1.2;lineage4.8 | gb | SRR29017461 | Other | La3;lineage4.9 | None | ERR990545 | Other | lineage3 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | SRR25395697 | Sensitive | lineage4.8 | None | ERR2513096 | Sensitive | lineage4.8 | gb | SRR1172817 | Other | La3 | None | SRR1173400 | Other | lineage4.9 | None | ERR2513294 | Sensitive | lineage4.8 | gb | ERR2513445 | Sensitive | lineage4.8 | gb | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | SRR1184294 | Other | lineage4.9 | None | ERR9786525 | Other | lineage4.1;lineage4.8 | None | SRR1184372 | MDR-TB | None | SRR1173363 | Other | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9787165 | Other | lineage6.1.3 | None | SRR1172951 | Other | lineage4.9 | None | ERR9786569 | Other | lineage4.8 | None | SRR29772570 | Other | lineage4.9 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR9786627 | Other | lineage4.1.2.1 | None | SRR1196494 | MDR-TB | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR9786526 | Other | lineage4.1;lineage4.8 | None | ERR11081257 | Other | lineage4.8 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786617 | Other | lineage4.1.1.1 | None | SRR29055629 | MDR-TB | La3;lineage2.2.1 | None | SRR1196474 | Other | lineage3.1.1 | None | SRR1196546 | Other | lineage4.9 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | ERR4818481 | Sensitive | lineage4.8 | None | SRR1172728 | RR-TB | La3 | None | SRR28119777 | Other | lineage4.9 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR12015083 | Other | La3;lineage4.8 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | ERR2512905 | Sensitive | lineage4.8 | gb | SRR29016780 | Other | lineage4.9 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786843 | Other | None | SRR1184381 | MDR-TB | None | SRR1172857 | Other | None | SRR28119805 | Other | lineage4.9 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | SRR12142341 | HR-TB | lineage2.1 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | ERR9786604 | Other | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR25827507 | MDR-TB | lineage4.1.1.1 | None | ERR2514042 | Sensitive | lineage4.8 | gb | SRR1173778 | Other | lineage4.9 | None | SRR1196583 | Other | lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR1183049 | RR-TB | lineage2.2 | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR1173355 | Other | lineage4.9 | None | SRR1196677 | Other | lineage2.2 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR4815923 | Sensitive | lineage4.8 | None | ERR4972483 | Pre-XDR-TB | lineage4.1.2.1.1 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR21798451 | Pre-XDR-TB | lineage4.7;lineage4.8 | None | SRR7535086 | Other | None | SRR1165699 | Other | lineage4.9 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR702406 | Other | lineage2.1 | None | ERR2513346 | Sensitive | lineage4.8 | gb | ERR736867 | Other | lineage2.1;lineage4.9 | None | SRR28119752 | Other | lineage4.9 | None | SRR1184346 | HR-TB | lineage3.1 | None | ERR9787197 | Other | None | SRR6789621 | Other | lineage4.9 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | SRR1196566 | Other | lineage4.9 | None | ERR2514444 | Sensitive | lineage4.8 | gb | ERR4407463 | HR-TB | None | SRR1196768 | MDR-TB | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR11252736 | Other | lineage4.9 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | SRR28119741 | Pre-XDR-TB | lineage2.2.1 | None | SRR1169194 | Other | lineage4.9 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR2027251 | Sensitive | lineage4.8 | None | ERR2512901 | Sensitive | lineage4.8 | gb | SRR1181020 | Other | lineage2.2.1 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR11466146 | Other | lineage4.3.4.2.1 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR15368973 | Other | lineage4.9 | None | SRR29093099 | MDR-TB | La3;lineage2.2.2 | None | ERR1035157 | Other | lineage4.9 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR28119753 | Other | lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR29093909 | Other | lineage4.9 | None |
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