Rv1630 - c.267G>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
62 Sensitive
5 RR-TB
43 HR-TB
21 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
50 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 83 |
| lineage2.2.1 | 17 |
| La3;lineage4 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| La2;lineage4.9 | 1 |
| La3;lineage4.9 | 8 |
| lineage3.1.3 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage6.1.1 | 2 |
| lineage4.9;lineage9 | 2 |
| lineage4.2.1 | 1 |
| lineage4.6.1.2 | 2 |
| lineage4.1.1.3 | 3 |
| lineage4.3.4.2 | 1 |
| M.canetti;lineage4.9 | 4 |
| lineage1.1.2 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.3.3 | 4 |
| lineage4.8;lineage4.9 | 2 |
| lineage4.8 | 3 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.3.4.2.1 | 4 |
| 3 | |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage4.1.1.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage3.1.2.2 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| La1;lineage4.9 | 2 |
| lineage4.4.1.1.1 | 2 |
| lineage3.1.2.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.3.2.1 | 3 |
| lineage1.1.3.1 | 1 |
| lineage4.1.2 | 2 |
| lineage2.2.1.1 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| La1.7;lineage4.9 | 2 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage5.2 | 2 |
| La1.8.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage3 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.8.1 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| lineage4.1.1.1 | 1 |
| lineage3.1.1 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 186 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR736872 | HR-TB | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR3283028 | Other | La3;lineage4 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | SRR5341455 | Sensitive | lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR323115 | Sensitive | lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR3799304 | Other | lineage6.1.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR4819933 | Sensitive | lineage4.9 | None | ERR9787014 | Other | lineage6.1.1 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR9634265 | Sensitive | lineage4.3.4.2 | None | ERR751326 | Other | lineage4.9 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | SRR5341303 | Sensitive | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR13266555 | Pre-XDR-TB | lineage2.2.1 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR29097026 | Other | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR6045795 | Sensitive | lineage2.2.1 | None | ERR4796254 | Sensitive | lineage4.9 | None | ERR4815471 | Sensitive | lineage4.9 | None | SRR29096410 | Other | lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | SRR23339977 | Sensitive | lineage4.8 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR323066 | Sensitive | lineage4.9 | None | SRR1173568 | Sensitive | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | ERR4816964 | Sensitive | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR5341366 | Sensitive | lineage4.9 | None | SRR8692887 | Other | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4818252 | Sensitive | lineage4.1.1.2 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR10808399 | Sensitive | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR6044942 | HR-TB | lineage4.9 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR987729 | HR-TB | lineage3.1.2.1 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR29096387 | Sensitive | M.canetti;lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | SRR26399265 | Other | lineage2.2.1 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR1023509 | Other | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR29096150 | Other | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | SRR5341467 | Other | lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR323085 | Sensitive | lineage4.9 | None | ERR11465511 | Other | lineage4.3.4.2.1 | None | ERR5311094 | HR-TB | lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR4816151 | Sensitive | lineage4.8 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | SRR8692782 | Other | lineage4.9 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR6044875 | Sensitive | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR1063896 | Sensitive | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | ERR4872077 | Pre-XDR-TB | lineage5.2 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR1791747 | Other | La1.8.1 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR6358979 | Other | lineage4.9 | None | ERR6866410 | Sensitive | lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR323107 | Sensitive | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | ERR11465628 | Sensitive | lineage4.3.4.2.1 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR4798504 | RR-TB | lineage3 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR29096174 | Sensitive | La1.7;lineage4.9 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR6511621 | Sensitive | lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR5341308 | Sensitive | lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR5341298 | Sensitive | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | SRR29097037 | Other | lineage4.9 | None | ERR987722 | MDR-TB | None | ERR4818536 | Other | lineage4.9 | None | ERR9119483 | Pre-XDR-TB | lineage5.2 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR137286 | Other | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None |
|---|
