Rv0005 - c.1639T>C
Drug resistance types
27 Sensitive
43 RR-TB
89 HR-TB
104 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
118 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.5 | 13 |
| lineage4.3.4.1 | 3 |
| lineage4.9 | 92 |
| La3;M.canetti;lineage2.1;lineage4.9 | 12 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage4.8;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 25 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 4 |
| M.canetti;lineage1 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage5.2 | 2 |
| La3;lineage4.9 | 6 |
| lineage4.4.1.1 | 2 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| M.canetti;lineage2.1;lineage6.3 | 2 |
| La1.7;lineage4.9 | 4 |
| lineage3 | 4 |
| lineage2.2.1 | 13 |
| lineage2.2.1.1 | 4 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage2.1;lineage4.9 | 16 |
| lineage4.1.3 | 2 |
| La3;lineage4.8 | 1 |
| lineage4.2;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | 1 |
| lineage4.1.2.1 | 13 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4 | 7 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| 13 | |
| lineage4.6.3;lineage4.9 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| lineage4.9;lineage7 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage2.1;lineage6.3 | 2 |
| La1.7.1 | 2 |
| lineage4.1.2 | 1 |
| La3;M.canetti;lineage4.9 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 11 |
| M.canetti;lineage4.9 | 2 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| lineage4.8 | 1 |
| lineage4.6.2.2 | 3 |
| La3;lineage4.3.4 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 6 |
| lineage4.1.1.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage6.2.1 | 1 |
| lineage4.9;lineage6.3 | 4 |
| lineage2.2 | 2 |
| lineage4.1;lineage4.8 | 2 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 5 |
| lineage4.3.3 | 3 |
| lineage2.1;lineage4.3.2 | 1 |
| La3;lineage2 | 1 |
| M.canetti;lineage2.1 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage4.4.1.2 | 1 |
| lineage6.1.3 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| M.canetti;lineage2.1;lineage3 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 4 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| lineage6.3.1 | 1 |
| M.canetti;lineage2.1;lineage4 | 1 |
| La3;lineage2.1;lineage4.9 | 2 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | 2 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La2;lineage2.2 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La3;M.canetti;lineage2.1;lineage3.1 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | 1 |
| lineage2.1 | 3 |
| La1.6;La3;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 1 |
| La1.8.1 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La1.7;lineage4.9;lineage7 | 3 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.2 | 1 |
| La2;lineage4.9 | 1 |
| La1.2.BCG;La1.8.1 | 1 |
| lineage1;lineage4.9 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| M.canetti;lineage4.3.1;lineage4.9 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 2 |
| M.canetti;lineage2.1;lineage4.1.2.1 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4.1;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | 1 |
| lineage1.1 | 1 |
| lineage1.1.1;lineage4 | 1 |
| La3;M.canetti;lineage3.1 | 1 |
| lineage5.1.4 | 1 |
| lineage1.1.2;lineage4 | 1 |
| La1.2.BCG | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.2.2 | 1 |
| lineage2.2.1;lineage4 | 1 |
| La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| La3;lineage1.1.2 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| lineage4.6.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 387 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR552209 | Sensitive | lineage4.5 | de | ERR6326069 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR323064 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6046397 | RR-TB | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR038268 | MDR-TB | La3;M.canetti;lineage4.8;lineage4.9 | None | ERR161033 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675486 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR4195495 | Sensitive | lineage4.5 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR323036 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR323062 | HR-TB | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | ERR2229143 | RR-TB | lineage4.9 | None | ERR3797070 | Other | lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR6358837 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR323037 | Other | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR26112505 | Sensitive | lineage3 | None | SRR5341453 | Other | lineage4.9 | None | ERR4814352 | Other | lineage2.2.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | ERR4812155 | Other | lineage4.9 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | SRR6044815 | RR-TB | lineage4.9 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR19233756 | Other | lineage4.5 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR12015083 | Other | La3;lineage4.8 | None | SRR1165628 | Other | La3;lineage4.9 | None | ERR4828872 | RR-TB | lineage4.2;lineage4.9 | None | SRR12416840 | MDR-TB | lineage4.9 | None | ERR551841 | Other | lineage4.5 | de | ERR3283017 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | None | SAMN02414850 | Other | lineage4.1.2.1 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | ERR3468607 | RR-TB | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR3675311 | Other | lineage4.9 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | ERR4817915 | Other | lineage4.9 | None | ERR2446382 | Other | lineage4 | None | SRR3675243 | MDR-TB | lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | ERR323038 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR3675568 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR9786671 | Other | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | SRR1640750 | RR-TB | None | ERR11252736 | Other | lineage4.9 | None | SRR18213713 | HR-TB | None | ERR212001 | HR-TB | None | SRR6325445 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR16370685 | Other | lineage4.5 | None | SRR3675507 | RR-TB | lineage4.9 | None | ERR8976043 | MDR-TB | lineage2.1;lineage2.2;lineage6.3 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | ERR2693242 | RR-TB | lineage2.1;lineage4.9 | None | SRR26399973 | Other | La3;lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR1162740 | Other | lineage4.1.2.1 | None | ERR3797083 | RR-TB | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | ERR9121389 | Sensitive | lineage4.5 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675561 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1167384 | Other | La3;lineage4.9 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR3675487 | MDR-TB | M.canetti;lineage4.9 | None | ERR2693231 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.9 | None | ERR3283024 | HR-TB | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR5311089 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3797016 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR5341333 | HR-TB | lineage2.1;lineage4.9 | None | SRR3675506 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | SRR23961558 | RR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR4811031 | Other | lineage4.5 | None | ERR3283032 | Other | lineage4.9 | None | SRR3675582 | Other | lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | SRR7496471 | Sensitive | lineage4 | None | ERR5311096 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR6046382 | RR-TB | lineage2.2.1 | None | ERR4816551 | MDR-TB | lineage4.1.1.3 | None | SRR1166821 | RR-TB | lineage4.1.2.1 | None | SRR7496472 | Other | lineage4.9 | None | ERR5917710 | RR-TB | lineage4.1.2.1 | None | ERR4815441 | HR-TB | lineage4.9 | None | SRR3675571 | MDR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR11081178 | Sensitive | lineage6.2.1 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR9786525 | RR-TB | lineage4.1;lineage4.8 | None | ERR126600 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR1165699 | Other | lineage4.9 | None | ERR176751 | HR-TB | lineage4.9 | None | SRR6045290 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR126618 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4830776 | MDR-TB | lineage4.5 | ir | SRR3675387 | Other | lineage4.9 | None | SRR3675518 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR323055 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR1180147 | RR-TB | lineage2.2.1.1 | None | SRR1162864 | MDR-TB | lineage4.1.2.1 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR772255 | MDR-TB | lineage2.1;lineage4.3.2 | None | SRR20969677 | HR-TB | La3;lineage2 | None | SRR3675450 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR323041 | MDR-TB | M.canetti;lineage2.1 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR5311102 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4188350 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR2509673 | Other | lineage2.2.1 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR9787165 | Other | lineage6.1.3 | None | SRR1510066 | RR-TB | lineage1.2.1.2.1 | None | ERR126608 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR9786601 | Other | lineage4.1.2.1 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675508 | MDR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR6045952 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR5311090 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR323033 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR1183144 | RR-TB | lineage2.2.1 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR7240492 | MDR-TB | La1.7.1 | None | SRR6046485 | Other | lineage4.9 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR9786645 | Other | lineage4.6.2.2 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | SRR3675464 | MDR-TB | lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR4814536 | MDR-TB | M.canetti;lineage2.1;lineage3 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR161037 | HR-TB | lineage4.9 | None | ERR9119096 | RR-TB | lineage4.3.3 | None | SRR3675554 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR6045053 | Other | lineage4 | None | ERR1063896 | HR-TB | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR234659 | HR-TB | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | ERR9787197 | Other | None | SRR3675236 | Other | None | SRR12708416 | Sensitive | None | ERR6866807 | RR-TB | lineage4.9 | None | ERR4188342 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1196583 | Other | lineage4.9 | None | ERR2693229 | RR-TB | La3;M.canetti;lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR176766 | MDR-TB | lineage2.1;lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR11050219 | Sensitive | lineage4.5 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR3675555 | MDR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR6046385 | Sensitive | lineage4.9 | None | SRR1165506 | Other | lineage4.1.2.1 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR2693239 | RR-TB | M.canetti;lineage2.1;lineage4 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4798099 | HR-TB | lineage4.9 | None | SRR1167055 | Other | lineage4.1.2.1 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR294248 | MDR-TB | lineage2.1;lineage4.9 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR3675322 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR323034 | MDR-TB | La3;M.canetti;lineage2.1;lineage3.1 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR4831362 | Sensitive | lineage4.5 | de | ERR124652 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR10147687 | MDR-TB | lineage4.5 | None | ERR5311100 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311101 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675558 | MDR-TB | M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | None | ERR5311098 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR702406 | Other | lineage2.1 | None | ERR387051 | RR-TB | lineage4.9 | None | ERR3797061 | Other | La1.6;La3;lineage4.9 | None | ERR11465628 | Sensitive | lineage4.3.4.2.1 | None | SRR6046564 | Sensitive | lineage4.9 | None | SRR1791696 | RR-TB | La1.8.1 | None | SRR6325448 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR990545 | RR-TB | lineage3 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR5341313 | Other | La1.7;lineage4.9;lineage7 | None | SRR3675545 | RR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675444 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6046644 | MDR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR1873396 | Pre-XDR-TB | M.canetti;lineage2.2 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR12142341 | HR-TB | lineage2.1 | None | ERR3797023 | MDR-TB | La1.8.1 | None | SRR3675495 | RR-TB | lineage2.1;lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR3797014 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR323066 | HR-TB | lineage4.9 | None | ERR124636 | HR-TB | lineage4.9 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR9119138 | RR-TB | M.canetti;lineage4.3.1;lineage4.9 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4811030 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323058 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR1873393 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | SRR6511621 | HR-TB | lineage4.9 | None | ERR5311082 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | SRR3675481 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR1035122 | HR-TB | lineage4.9 | None | ERR11050751 | Sensitive | lineage4.5 | None | SRR6325442 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR1023295 | MDR-TB | M.canetti;lineage2.1;lineage4.1.2.1 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR1184294 | Other | lineage4.9 | None | ERR4796254 | Other | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR5341432 | Other | La1.7;lineage4.9;lineage7 | None | SRR6045948 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR3468544 | RR-TB | lineage2.1;lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | ERR8665994 | RR-TB | lineage4.9 | None | SRR1173767 | MDR-TB | lineage4.4.1.1 | None | ERR5311099 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | ERR2693257 | HR-TB | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | SRR1180137 | RR-TB | lineage2.2.1 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR5908228 | RR-TB | lineage4.3.3 | None | SRR3675515 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR1180172 | RR-TB | lineage2.2.1 | None | ERR5311083 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675320 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | ERR3077978 | RR-TB | lineage1.1 | None | ERR736834 | HR-TB | lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | ERR473314 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR736863 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR323054 | MDR-TB | La3;M.canetti;lineage3.1 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | SRR6045503 | Other | lineage4.9 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR9786642 | Other | lineage4.1.2.1 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR9786604 | Other | None | ERR9786843 | Other | None | SRR6789626 | Other | None | ERR2514692 | Other | None | ERR323040 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR137286 | Other | lineage4.9 | None | ERR4797474 | Other | lineage4.9 | None | ERR278594 | MDR-TB | lineage2.1;lineage4.9 | None | ERR4817692 | MDR-TB | lineage1.1.2;lineage4 | None | ERR1035239 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | ERR4800341 | HR-TB | lineage3 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | ERR551713 | Sensitive | lineage4.5 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR5341330 | Other | lineage4.9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | SRR6046514 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | ERR3275450 | Other | lineage4 | None | ERR5311081 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3797069 | Other | lineage4.9 | None | SRR18910194 | HR-TB | lineage2.2.2 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR124651 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | ERR4821053 | RR-TB | lineage3 | None | ERR6866639 | HR-TB | lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR124642 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | ERR323063 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283044 | Other | lineage4 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR13861381 | HR-TB | lineage4.9 | None | ERR6358755 | Other | lineage4.6.1.1 | None | SRR6045526 | Other | lineage4.9 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | ERR323047 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | ERR323060 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR386953 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311078 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR3283016 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR176658 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None |
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