Rv0407 - c.582T>C


Drug resistance types
38 Sensitive 3 RR-TB 89 HR-TB 41 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 100 Other
lineage Counts
lineage Count
La3;M.canetti;lineage2.1;lineage4.9 11
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
lineage4.9 67
16
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage2.1;lineage4.9 10
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
La1.7;M.canetti;lineage4.9 3
lineage4.1.4 8
La3;M.canetti;lineage4.8;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage2.1;lineage4.9;lineage6.3 5
La3;M.canetti;lineage4.9 2
La1.7;lineage4.9 5
M.canetti;lineage4.9;lineage9 1
M.canetti;lineage2.1;lineage4.9 19
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage2.1;lineage6.3 2
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.9 2
lineage4.6.1 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.1.3 2
lineage6.3.1 1
lineage2.2.1 6
M.canetti;lineage2.1;lineage4.1.2.1 1
La1.7.1;lineage4.9 1
lineage2.2 2
M.canetti;lineage2.1;lineage6.3 1
lineage1.1.1 1
lineage4.1.1;lineage4.9 1
lineage4.1.1.1 1
lineage4.1.2.1 4
lineage4.3.2;lineage4.9 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage3 2
lineage4.9;lineage6.1.3 1
La3;lineage2.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage4.9;lineage6.3 5
La3;M.canetti;lineage2.2.1 1
La3;M.canetti;lineage2.1;lineage3.1 1
lineage4 2
lineage4.3.1;lineage4.9;lineage6 1
lineage4.6.3;lineage4.9 1
lineage4.8 1
La2;lineage4.9 1
lineage4.6.1.1 2
lineage1.1 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.3.2 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage2.1 2
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4.2.2 1
lineage4.9;lineage7 2
lineage6.1.3 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
M.canetti;lineage4.2 1
lineage4.9.1 3
lineage3.1.2.1;lineage4 1
La3;lineage4.9 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
lineage4.2;lineage4.6.3;lineage4.9.1 1
La2;lineage2.2 1
La1.6;La3;M.canetti;lineage4.2.2 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.6;La3;lineage4.9 2
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage4.7 2
lineage4.6.2.2 2
lineage4.3.4 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage2.2.1.2 1
lineage4.3.4.1 1
lineage4.1.2 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1 1
M.canetti;lineage2.1;lineage3 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 274
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3283055 HR-TB lineage4.9 None
ERR926156 Sensitive lineage4.9 None
SRR1640750 Other None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR28389887 Sensitive lineage4.1.4 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR926157 Sensitive lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
SRR13837550 Other lineage4.9 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR13837552 Other lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
ERR4811105 HR-TB None
ERR4810741 HR-TB None
ERR4811142 RR-TB None
ERR6358755 Other lineage4.6.1 None
ERR4811075 Other None
ERR4811311 Other None
SRR28119753 Other lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9787139 Other lineage6.3.1 None
ERR926163 Other lineage4.9 None
SRR12142341 HR-TB lineage2.2.1 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR8976043 HR-TB lineage2.2 None
SRR13861587 Other lineage4.9 None
SRR13861588 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR971389 Sensitive lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
SRR28859811 Sensitive lineage4.1.4 None
SRR8217918 HR-TB lineage4.9 None
SRR6325442 HR-TB lineage4.1.1;lineage4.9 None
SRR6325447 HR-TB lineage4.1.1.1 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR13837908 Other lineage4.9 None
ERR6359082 Other lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR987722 MDR-TB None
SRR28119805 Other lineage4.9 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR926165 Sensitive lineage4.9 None
ERR9786604 Other None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR13837551 Other lineage4.9 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
SRR28868345 Other lineage3 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR926155 Sensitive lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR28389862 Sensitive lineage4.1.4 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR18213713 HR-TB None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR6045053 Other lineage4 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR6046046 Other lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR1163221 MDR-TB lineage4.1.2.1 None
SRR13861177 Other lineage4.9 None
ERR736848 Other lineage4.9 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4799025 Other lineage4.8 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
SRR6045526 Other lineage4.9 None
ERR1199132 Sensitive lineage4.6.1.1 None
SRR26112150 MDR-TB lineage4.1.4 None
ERR3077978 Other lineage1.1 None
ERR212123 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4769450 Other lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR772255 MDR-TB lineage4.3.2 None
ERR161037 Other lineage4.9 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR987765 Sensitive lineage4.6.1.1 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
SRR12416824 HR-TB None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR9117721 HR-TB None
ERR9786682 Other lineage4.1.2.1 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR20970016 Other lineage2.2.1 None
SRR20969677 HR-TB lineage2.1 None
ERR4816466 HR-TB lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR702406 Other lineage2.1 None
SRR6046594 Sensitive lineage4.9 None
ERR926164 Other lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR14782405 HR-TB lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR5341308 Sensitive lineage4.9 None
SRR15723048 Sensitive lineage4.2.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR3797046 HR-TB lineage4.9 None
ERR1023236 Other lineage6.1.3 None
SRR3675494 RR-TB lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4769452 Other lineage4.9 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR29055712 Sensitive lineage4.1.4 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR7801258 Sensitive lineage4.9.1 None
ERR7801290 Sensitive lineage4.9.1 None
SRR11662690 HR-TB lineage4.9 None
ERR3797070 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR234659 Other None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR3675539 HR-TB lineage4.9;lineage7 None
SRR13837652 Other lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR6046878 Other lineage4.9 None
SRR19267903 Sensitive lineage4.1.4 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR28351455 Other lineage3.1.2.1;lineage4 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR1063896 Sensitive None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR14782264 Sensitive lineage4.7 None
SRR5341300 HR-TB lineage4.9 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR926160 Sensitive lineage4.9 None
SRR14782054 Other lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
SRR5341330 Other lineage4.9 None
ERR2027263 Other lineage4 None
SRR6045347 Other lineage4.9 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR4800341 Other None
ERR161039 Sensitive lineage4.3.4 None
ERR124636 Sensitive lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR4819932 Sensitive lineage4.7 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR3675236 Other None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283032 Other lineage4.9 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR926159 Sensitive lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR29096107 Sensitive lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2 None
SRR20969708 HR-TB lineage2.2.1 None
SRR5341453 Other lineage4.9 None
SRR13861176 Other lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR9970978 Sensitive lineage4.1.2 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR28119811 Other lineage2.2.1 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675488 Other La1.7;lineage4.9 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR373947 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SRR16370652 Sensitive lineage4.1.4 None
SRR30049948 Sensitive lineage4.1.4 None
ERR5311094 HR-TB lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR29017081 Sensitive lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
SRR6046485 Other lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR323041 HR-TB M.canetti;lineage2.1 None
SRR6045233 Other M.canetti;lineage4.9 None
SRR13837920 Other lineage4.9 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR7801295 Sensitive lineage4.9.1 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR9787197 Other None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None