Rv0529 - c.-360T>C


Drug resistance types
1 Sensitive 5 RR-TB 26 HR-TB 14 MDR-TB 1 Pre-XDR-TB 2 XDR-TB 60 Other
lineage Counts
lineage Count
lineage2.1;lineage4.3.2;lineage4.9 1
lineage2.1;lineage4.9 12
M.canetti;lineage2.1;lineage4.9 2
lineage4.1.2.1 2
lineage4.9 11
lineage2.1;lineage4.9;lineage6.3 9
lineage4.1.1.1 2
11
lineage2.1;lineage6.3 2
La3;lineage1.1.2 1
lineage4.8 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
M.canetti;lineage4.9 2
lineage2.2.1;lineage3 1
lineage4.1.3 2
La3;lineage2.1;lineage4.9;lineage6.3 4
M.canetti;lineage4.2;lineage4.9 1
lineage1.1.2;lineage4.1.2.1;lineage4.1.3 1
lineage4.3.4.1 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage5.2 2
La3;lineage2 1
lineage4.2;lineage4.9 3
lineage2.1 2
lineage4.2;lineage4.8.1;lineage4.9 2
La1.7;lineage4.2 1
lineage2.2.1 4
lineage4.9;lineage6.3 4
lineage3.1;lineage9 1
La3;lineage2.1;lineage4.9 2
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.2.1.1 2
lineage2.2.1;lineage6.3 1
lineage3.1.2.2 1
M.canetti;lineage2.1;lineage6.3 1
lineage6.1.3 1
lineage4.6.3;lineage4.9;lineage6.3 1
La3;lineage2.1;lineage6.3 1
lineage3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage4.8 1
lineage6.3.1 1
La3;lineage4.9 1
lineage4.7 1
La1.2.BCG;La1.8.1 1
lineage4 1
spoligotype Counts
spoligotype Count
None 109
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
SRR12416840 MDR-TB lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3283018 HR-TB lineage4.9 None
ERR9786617 Other lineage4.1.1.1 None
ERR2514692 Other None
SRR18213713 HR-TB None
SRR25827682 Other None
ERR4407463 HR-TB None
SRR3675236 Other None
SRR28119805 Other lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR9786569 Other lineage4.8 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR3797070 Other lineage4.9 None
ERR4816100 Sensitive lineage1.1.2;lineage4.1.2.1;lineage4.1.3 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR3283042 HR-TB lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR9119500 MDR-TB lineage5.2 None
SRR20969677 HR-TB La3;lineage2 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR23961559 Other La1.7;lineage4.2 None
SRR1183144 RR-TB lineage2.2.1 None
SRR25827507 MDR-TB lineage4.1.1.1 None
ERR9786682 Other lineage4.1.2.1 None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR6079962 HR-TB lineage2.2.1.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR26159043 Other lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR4872094 MDR-TB lineage5.2 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR9786611 HR-TB lineage4.1.3 None
SRR1180147 RR-TB lineage2.2.1.1 None
SRR6458423 HR-TB lineage2.2.1 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR9787165 Other lineage6.1.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR9786671 Other None
ERR9786843 Other None
ERR9117709 Other None
SRR6789626 Other None
ERR234659 HR-TB None
ERR9787197 Other None
SRR28119777 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3675275 Other lineage4.9 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4800341 HR-TB lineage3 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4817893 Other La3;lineage4.8 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
ERR9787139 Other lineage6.3.1 None
ERR3797069 Other lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
ERR4819932 Other lineage4.7 None
SRR26937107 MDR-TB lineage2.2.1 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR6045526 Other lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR2027263 Other lineage4 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None