SRR3675243
|
Other
|
lineage4.9
|
None
|
SRR3675558
|
HR-TB
|
M.canetti;lineage4.1.1.3;lineage6.3;lineage8
|
None
|
SRR1165667
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR1167384
|
Other
|
La3;lineage4.9
|
None
|
SRR1173363
|
Other
|
|
None
|
SRR6045002
|
RR-TB
|
lineage4.9
|
None
|
SRR1640750
|
Other
|
|
None
|
ERR4815752
|
Other
|
lineage4.9
|
None
|
SRR3675572
|
Other
|
|
None
|
SRR3675545
|
Other
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR3675568
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8
|
None
|
SRR3675457
|
Other
|
lineage4.9
|
None
|
SRR5341333
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR6045380
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR6046878
|
Other
|
lineage4.9
|
None
|
SRR3675444
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR21732980
|
Other
|
lineage4.3.3
|
None
|
SRR3675465
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR1063858
|
HR-TB
|
lineage4.9
|
None
|
SRR6045242
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR29051093
|
Other
|
lineage4.9
|
None
|
SRR5485614
|
RR-TB
|
lineage4.9
|
None
|
SRR6045010
|
Sensitive
|
lineage4.9
|
None
|
SRR29096541
|
Other
|
lineage4.9
|
None
|
SRR29096410
|
Other
|
lineage4.9
|
None
|
SRR6045832
|
Other
|
lineage4.9
|
None
|
ERR038268
|
HR-TB
|
La3;M.canetti;lineage4.8;lineage4.9
|
None
|
SRR6045952
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR3283036
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR3283042
|
Other
|
lineage4.9
|
None
|
ERR3797023
|
HR-TB
|
La1.8.1
|
None
|
ERR4816762
|
Sensitive
|
lineage4.9
|
None
|
SRR19304036
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR176658
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4818929
|
HR-TB
|
lineage4.9
|
None
|
ERR3283040
|
HR-TB
|
lineage4.9
|
None
|
SRR3675508
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR3468607
|
Other
|
lineage4.9
|
None
|
ERR4810741
|
HR-TB
|
La3;lineage2.1;lineage6.3
|
None
|
SRR3675571
|
HR-TB
|
M.canetti;lineage4.2;lineage4.9
|
None
|
ERR4769439
|
HR-TB
|
lineage4.9
|
None
|
ERR978761
|
Other
|
lineage4.8
|
None
|
ERR978746_ERR978747_ERR978748
|
RR-TB
|
lineage4.8
|
None
|
ERR736817
|
HR-TB
|
lineage4.3.4
|
None
|
ERR2517514
|
Sensitive
|
lineage4.8
|
None
|
ERR4815079
|
RR-TB
|
lineage3
|
None
|
ERR3283019
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR6046514
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR1710057
|
Other
|
lineage2.1
|
None
|
SRR29055629
|
MDR-TB
|
La3;lineage2.2.1
|
None
|
ERR4811075
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR9119669
|
HR-TB
|
lineage4.9
|
None
|
ERR9786682
|
Other
|
lineage4.1.2.1
|
None
|
SRR19303884
|
Other
|
lineage2.1;lineage6.3
|
None
|
ERR5162090
|
RR-TB
|
lineage4.9
|
None
|
SRR15316595
|
RR-TB
|
lineage4.4.2
|
None
|
ERR9117721
|
HR-TB
|
La3;lineage1.1.2
|
None
|
ERR4821053
|
RR-TB
|
lineage3
|
None
|
ERR4811142
|
RR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR7496517
|
Other
|
|
None
|
ERR4816717
|
RR-TB
|
lineage3.1.2.1
|
None
|
SRR6046299
|
Other
|
lineage4.3.1;lineage4.9;lineage6
|
None
|
ERR5311101
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4820773
|
HR-TB
|
lineage4.9
|
None
|
SAMEA3501073
|
RR-TB
|
lineage4.8
|
None
|
ERR7801176
|
RR-TB
|
lineage4.6.5
|
None
|
SRR16156832
|
RR-TB
|
lineage2.2;lineage4
|
None
|
ERR323107
|
Sensitive
|
lineage4.9
|
None
|
ERR11466146
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR067712
|
Sensitive
|
lineage4.9
|
None
|
SRR3675467
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR3675574
|
Other
|
lineage4.6.3;lineage4.9;lineage6.3
|
None
|
SRR6046492
|
Other
|
lineage4.9
|
None
|
ERR1063857
|
MDR-TB
|
La2;lineage4.9
|
None
|
ERR1035138
|
MDR-TB
|
lineage2.1;lineage4.9
|
None
|
SRR1184312
|
Other
|
lineage2.2.1
|
None
|
ERR6359066
|
HR-TB
|
lineage4.9
|
None
|
SRR6045526
|
Other
|
lineage4.9
|
None
|
ERR736856
|
Sensitive
|
lineage4.9
|
None
|
ERR736839
|
HR-TB
|
M.canetti;lineage4.9
|
None
|
ERR181887
|
Other
|
lineage4.9
|
None
|
SRR10809074
|
Sensitive
|
lineage4.9
|
None
|
ERR2027263
|
Other
|
lineage4
|
None
|
ERR3283014
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR4816999
|
Other
|
|
None
|
SRR29051077
|
Other
|
lineage4.9
|
None
|
SRR6045219
|
HR-TB
|
lineage4.9
|
None
|
ERR4799478
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR29016901
|
Other
|
La3;lineage4.9
|
None
|
ERR4816967
|
Other
|
lineage5
|
None
|
SRR26159063
|
RR-TB
|
lineage4.9
|
None
|
ERR4818252
|
Sensitive
|
lineage4.1.1.2
|
None
|
ERR4769474
|
HR-TB
|
lineage4.9
|
None
|
ERR4798504
|
RR-TB
|
lineage3
|
None
|
ERR5917710
|
Other
|
lineage4.1.2.1
|
None
|
ERR4872119
|
MDR-TB
|
lineage4.6.2.2
|
None
|
ERR9119138
|
RR-TB
|
M.canetti;lineage4.3.1;lineage4.9
|
None
|
ERR294266
|
HR-TB
|
lineage4.2;lineage4.8.1;lineage4.9
|
None
|
ERR3283016
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR502473
|
RR-TB
|
lineage4.9
|
None
|
SRR3675248
|
Other
|
lineage4.9
|
None
|
ERR553132
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR6045327
|
Other
|
lineage2.1;lineage4.3.2;lineage4.9
|
None
|
SRR11342653
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR978760
|
RR-TB
|
lineage4.8
|
None
|
SRR11342636
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR6458421
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR1063862
|
HR-TB
|
lineage4.9
|
None
|
SRR3675236
|
Other
|
|
None
|
ERR7821123
|
Other
|
lineage1.1.3.2
|
None
|
SRR3675524
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR3675561
|
Other
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR278594
|
HR-TB
|
lineage2.1;lineage4.9
|
None
|
ERR2229143
|
RR-TB
|
lineage4.9
|
None
|
ERR3283021
|
HR-TB
|
lineage4.9
|
None
|
ERR3283044
|
Other
|
lineage4
|
None
|
ERR323053
|
MDR-TB
|
La2;lineage4.9;lineage9
|
None
|
ERR4800341
|
Other
|
lineage3
|
None
|
ERR5311097
|
Sensitive
|
lineage4.2;lineage4.6.3;lineage4.9
|
None
|
SRR3675510
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR867570
|
RR-TB
|
lineage4.9
|
None
|
ERR323060
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR1049725
|
Other
|
lineage4.1.2.1;lineage4.4.1
|
None
|
ERR4818347
|
Other
|
lineage4.1.2
|
None
|
ERR4818615
|
Sensitive
|
|
None
|
ERR502524
|
HR-TB
|
lineage4.9;lineage6.3
|
None
|
ERR6866807
|
Other
|
lineage4.9
|
None
|
SRR3675232
|
Other
|
lineage4.1.2.1
|
None
|
SRR25827507
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR4796577
|
HR-TB
|
|
None
|
ERR4798823
|
HR-TB
|
lineage4
|
None
|
ERR4819241
|
Other
|
lineage4.9
|
None
|
SRR11349147
|
RR-TB
|
lineage4.3.2.1
|
None
|
SRR1172951
|
Other
|
lineage4.9
|
None
|
ERR978750
|
RR-TB
|
lineage4.8
|
None
|
ERR4769444
|
HR-TB
|
lineage4.9
|
None
|
ERR4188342
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR10808668
|
Sensitive
|
lineage2.2.1
|
None
|
ERR2693229
|
RR-TB
|
La3;M.canetti;lineage4.9
|
None
|
SRR6045359
|
Sensitive
|
lineage4.9
|
None
|
SRR1175052
|
HR-TB
|
lineage4.9
|
None
|
ERR1035239
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR13861484
|
Sensitive
|
lineage4.9
|
None
|
ERR9787014
|
Other
|
lineage6.1.1
|
None
|
SRR5007161
|
RR-TB
|
lineage4.1.1.3.1;lineage4.9
|
None
|
ERR323063
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR978755
|
RR-TB
|
lineage4.8
|
None
|
SRR3675270
|
Other
|
lineage4.9
|
None
|
ERR4818646
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR2026698
|
HR-TB
|
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
|
None
|
ERR4769417
|
Pre-XDR-TB
|
lineage4.9
|
None
|
ERR6358755
|
Other
|
lineage4.6.1.1
|
None
|
SRR18213713
|
HR-TB
|
|
None
|
ERR978765
|
RR-TB
|
lineage4.8
|
None
|
SRR6044875
|
Sensitive
|
lineage4.9
|
None
|
SRR28119717
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR11342658
|
RR-TB
|
lineage4.1.2
|
None
|
ERR323058
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR3283028
|
Other
|
La3;lineage4
|
None
|
ERR176568
|
HR-TB
|
La3;lineage2.1;lineage4.9
|
None
|
SRR6046460
|
MDR-TB
|
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
|
None
|
SRR1173788
|
Sensitive
|
lineage4.9
|
None
|
SRR11342649
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR9787139
|
Other
|
lineage6.3.1
|
None
|
SRR3742657
|
Pre-XDR-TB
|
La3;M.canetti;lineage2.2.1
|
None
|
ERR3797080
|
Sensitive
|
lineage4.9
|
None
|
SRR1173687
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR19303820
|
RR-TB
|
lineage4.8
|
None
|
ERR294248
|
MDR-TB
|
lineage2.1;lineage4.9
|
None
|
ERR473323
|
HR-TB
|
lineage4.9
|
None
|
SRR1184388
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR3675214
|
Other
|
lineage4.9
|
None
|
SRR3675506
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR5311083
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR1173629
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4817896
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1183049
|
RR-TB
|
lineage2.2
|
None
|
ERR5311081
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4811022
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR323034
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage3.1
|
None
|
SRR18003019
|
Other
|
lineage2.2.1
|
None
|
ERR772255
|
MDR-TB
|
lineage2.1;lineage4.3.2
|
None
|
ERR8665994
|
Other
|
lineage4.9
|
None
|
ERR4769554
|
RR-TB
|
lineage4.9
|
None
|
ERR2026695
|
MDR-TB
|
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3
|
None
|
ERR9786592
|
Other
|
lineage4.3.4.2
|
None
|
ERR9786627
|
Other
|
lineage4.1.2.1
|
None
|
ERR124651
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
|
None
|
SRR3416776
|
Other
|
lineage2.1
|
None
|
ERR3797083
|
RR-TB
|
lineage4.9
|
None
|
SRR1169194
|
Other
|
lineage4.9
|
None
|
SRR5266542
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
SRR6046362
|
MDR-TB
|
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9
|
None
|
ERR5311100
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR6046046
|
Other
|
lineage4.9
|
None
|
ERR323036
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR323108
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR323039
|
HR-TB
|
La2;lineage4.9
|
None
|
SRR3675529
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR3797028
|
HR-TB
|
M.canetti;lineage4.9
|
None
|
SRR5341332
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR5341341
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2693228
|
RR-TB
|
lineage4.9
|
None
|
ERR736837
|
Pre-XDR-TB
|
lineage4.9
|
None
|
SRR1166821
|
Other
|
lineage4.1.2.1
|
None
|
ERR4819322
|
Other
|
lineage1.1;lineage4
|
None
|
ERR736863
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR176741
|
Other
|
lineage4.9
|
None
|
SRR1165628
|
Other
|
La3;lineage4.9
|
None
|
ERR4818259
|
RR-TB
|
lineage4.1.1.1
|
None
|
ERR323040
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR14801759
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR13245558
|
MDR-TB
|
La3;lineage2.2.2
|
None
|
SRR5007169
|
RR-TB
|
lineage4.8.2
|
None
|
ERR978761_ERR978762_ERR978760
|
RR-TB
|
lineage4.8
|
None
|
ERR4811105
|
HR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR15368973
|
Other
|
lineage4.9
|
None
|
ERR4815604
|
Other
|
|
None
|
ERR1873396
|
Pre-XDR-TB
|
M.canetti;lineage2.2
|
None
|
ERR4816551
|
HR-TB
|
lineage4.1.1.3
|
None
|
SAMEA3501065
|
RR-TB
|
lineage4.8
|
None
|
SRR25827497
|
XDR-TB
|
lineage2.2.1;lineage3
|
None
|
SRR1174897
|
MDR-TB
|
lineage4.9;lineage9
|
None
|
SRR6046066
|
Other
|
lineage4.9
|
None
|
ERR2446566
|
Other
|
lineage4.9
|
None
|
ERR3797015
|
HR-TB
|
lineage4.9
|
None
|
SRR6046133
|
HR-TB
|
lineage4.9
|
None
|
SRR11342651
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR323045
|
HR-TB
|
lineage1;lineage4.9
|
None
|
ERR1063883
|
HR-TB
|
lineage4.9
|
None
|
SRR28119811
|
Other
|
lineage2.2.1;lineage6.3
|
None
|
SRR6046593
|
Other
|
lineage4.9
|
None
|
SRR13423649
|
Sensitive
|
lineage2.2.1
|
None
|
SRR21733183
|
RR-TB
|
lineage1.1.2
|
None
|
ERR5311078
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR11342660
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR26159043
|
Other
|
lineage4.9
|
None
|
SRR6789626
|
Other
|
|
None
|
ERR4798648
|
MDR-TB
|
lineage3.1.2.2
|
None
|
ERR4797588
|
MDR-TB
|
lineage3
|
None
|
ERR216938
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR067699
|
Sensitive
|
La1;lineage2;lineage4.9
|
None
|
SRR7496471
|
Sensitive
|
lineage4
|
None
|
ERR3283011
|
Other
|
La3;lineage4.9
|
None
|
SRR10808399
|
Sensitive
|
lineage4.9
|
None
|
SRR1184308
|
Sensitive
|
lineage4.9
|
None
|
SRR1196546
|
Other
|
lineage4.9
|
None
|
ERR6359074
|
HR-TB
|
lineage4.9
|
None
|
ERR3797043
|
Sensitive
|
lineage4.9
|
None
|
SRR13861284
|
RR-TB
|
lineage4.9
|
None
|
SRR6046644
|
HR-TB
|
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3
|
None
|
SRR10808805
|
Other
|
La1;lineage4.9
|
None
|
SRR6458423
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1791696
|
Other
|
La1.8.1
|
None
|
SRR3675481
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR18003047
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4815441
|
HR-TB
|
lineage4.9
|
None
|
SRR6044942
|
HR-TB
|
lineage4.9
|
None
|
SRR6785263
|
Sensitive
|
lineage2.2.1
|
None
|
ERR1023525
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR1023295
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.2.1
|
None
|
SRR6785268
|
Sensitive
|
lineage4.2.1
|
None
|
ERR4811311
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR1063859
|
HR-TB
|
La1.7.1;lineage4.9
|
None
|
ERR4821272
|
RR-TB
|
lineage4.1.2.1
|
None
|
ERR5311089
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR3675464
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3;lineage8
|
None
|
SRR5007193
|
RR-TB
|
lineage4.1.1.3.1
|
None
|
ERR990545
|
Other
|
lineage3
|
None
|
ERR11081258
|
Other
|
lineage4.8
|
None
|
ERR4819877
|
HR-TB
|
lineage4.9
|
None
|
ERR11049020
|
Other
|
lineage4.8
|
None
|
SRR6045290
|
RR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4816478
|
HR-TB
|
lineage4
|
None
|
ERR5311077
|
Other
|
La1.8.1
|
None
|
ERR702406
|
Other
|
lineage2.1
|
None
|
SRR6046594
|
Sensitive
|
lineage4.9
|
None
|
ERR4816656
|
Other
|
lineage4.9
|
None
|
ERR2026696
|
MDR-TB
|
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3
|
None
|
SRR3675549
|
Other
|
lineage4.9
|
None
|
ERR3445501
|
HR-TB
|
La1.7.1;La1.7.X-unk4;lineage7
|
None
|
SRR1172234
|
Other
|
lineage4.9
|
None
|
ERR2693252
|
Sensitive
|
lineage4.9
|
None
|
ERR3275201
|
Sensitive
|
lineage4.8
|
nl
|
ERR3275196
|
Other
|
lineage2.2.1
|
nl
|
SRR6045795
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6046141
|
Other
|
lineage4.9
|
None
|
ERR13265528
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR5311098
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR6358837
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
SRR1196566
|
Other
|
lineage4.9
|
None
|
ERR3797016
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR3445504
|
Other
|
lineage4.9;lineage6.1.3
|
None
|
ERR4407463
|
HR-TB
|
|
None
|
ERR9786694
|
Other
|
lineage4.1.2.1
|
None
|
ERR9787165
|
Other
|
lineage6.1.3
|
None
|
ERR4828872
|
Sensitive
|
lineage4.2;lineage4.9
|
None
|
SAMEA3501063
|
RR-TB
|
lineage4.8
|
None
|
SRR11342662
|
MDR-TB
|
lineage4.8.1
|
None
|
SRR1180137
|
Other
|
lineage2.2.1
|
None
|
SRR13861510
|
Other
|
lineage4.9
|
None
|
ERR3283027
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR14782539
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR1173778
|
Other
|
lineage4.9
|
None
|
ERR4818021
|
Other
|
La1.2.BCG;La1.8.1
|
None
|
SRR1196768
|
MDR-TB
|
|
None
|
SRR3675322
|
HR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.9
|
None
|
ERR9786569
|
Other
|
lineage4.8
|
None
|
SRR18549032
|
HR-TB
|
lineage2.2.1.2;lineage7
|
None
|
SRR1196583
|
Other
|
lineage4.9
|
None
|
SRR29016780
|
Other
|
lineage4.9
|
None
|
SRR6046540
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR978733
|
RR-TB
|
lineage4.8
|
None
|
SRR1172310
|
HR-TB
|
lineage4.9
|
None
|
SRR3675275
|
Other
|
lineage4.9
|
None
|
SRR3675507
|
Other
|
lineage4.9
|
None
|
SRR10993951
|
RR-TB
|
La1.6
|
None
|
ERR4810624
|
MDR-TB
|
lineage2.2
|
None
|
SRR3742665
|
HR-TB
|
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
|
None
|
ERR2513382
|
RR-TB
|
lineage4.1.1.3
|
None
|
ERR4817893
|
Other
|
La3;lineage4.8
|
None
|
ERR987729
|
HR-TB
|
lineage3.1.2.1;lineage3.1.2.2
|
None
|
SRR12142339
|
HR-TB
|
lineage2.2.1
|
None
|
ERR2693242
|
RR-TB
|
lineage2.1;lineage4.9
|
None
|
SRR20969677
|
HR-TB
|
La3;lineage2
|
None
|
ERR2693239
|
RR-TB
|
M.canetti;lineage2.1;lineage4
|
None
|
ERR3283026
|
HR-TB
|
lineage4.2;lineage4.6.3;lineage4.9.1
|
None
|
ERR736871
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR9787336
|
RR-TB
|
lineage6.1.3
|
None
|
ERR502481
|
RR-TB
|
lineage4.9
|
None
|
ERR502474
|
RR-TB
|
lineage4.9
|
None
|
ERR736874
|
Other
|
La3;lineage2.1;lineage4.9
|
None
|
ERR4817735
|
Other
|
lineage4.8
|
None
|
ERR1063839
|
MDR-TB
|
La2;lineage2.2
|
None
|
SRR3675482
|
Other
|
lineage4.9
|
None
|
ERR3797069
|
Other
|
lineage4.9
|
None
|
SRR5007167
|
RR-TB
|
lineage4.1.1.3.1
|
None
|
SRR1735596
|
RR-TB
|
lineage4.9
|
None
|
SRR1184298
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
ERR245758
|
Other
|
lineage4.9.1
|
None
|
SRR26399973
|
Other
|
La3;lineage4.9
|
None
|
ERR4819932
|
Other
|
lineage4.7
|
None
|
SRR1173355
|
Other
|
lineage4.9
|
None
|
ERR978726
|
RR-TB
|
lineage4.8
|
None
|
SRR6045191
|
Sensitive
|
lineage4.9
|
None
|
SRR6045053
|
Other
|
lineage4
|
None
|
ERR473277
|
HR-TB
|
La3;M.canetti;lineage4.9
|
None
|
ERR6358979
|
Other
|
lineage4.9
|
None
|
ERR3797048
|
Other
|
La3;lineage4.9
|
None
|
ERR4821172
|
RR-TB
|
lineage4.9
|
None
|
ERR4821276
|
Sensitive
|
lineage3
|
None
|
ERR124642
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
|
None
|
ERR13267017
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1196677
|
Other
|
lineage2.2
|
None
|
ERR9896144
|
Other
|
lineage3
|
None
|
SRR11342687
|
RR-TB
|
lineage4.2.2.2
|
None
|
ERR6866410
|
Sensitive
|
lineage4.9
|
None
|
ERR2026697
|
HR-TB
|
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
|
None
|
SRR1163221
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR126608
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR6044790
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR6325445
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
SRR11342642
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR3275941
|
RR-TB
|
lineage4.3
|
nl
|
SRR3675269
|
RR-TB
|
lineage4.9
|
None
|
ERR323115
|
Sensitive
|
lineage4.9
|
None
|
SRR10315751
|
MDR-TB
|
lineage4.8
|
None
|
SRR3675486
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR9786444
|
Sensitive
|
lineage4.8
|
None
|
ERR1035157
|
Other
|
lineage4.9
|
None
|
SRR18910194
|
HR-TB
|
lineage2.2.2
|
None
|
ERR978750_ERR978752_ERR978751
|
RR-TB
|
lineage4.8
|
None
|
ERR4818561
|
Sensitive
|
lineage4.9
|
None
|
SRR1173384
|
Other
|
lineage4.9
|
None
|
ERR3283030
|
HR-TB
|
lineage4.9
|
None
|
SRR3675216
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR9786526
|
Other
|
lineage4.1;lineage4.8
|
None
|
ERR4769521
|
RR-TB
|
lineage4.9
|
None
|
SRR1169306
|
Other
|
La3;lineage4.9
|
None
|
ERR978755_ERR978756_ERR978754_ERR978757
|
RR-TB
|
lineage4.8
|
None
|
SRR16156817
|
Other
|
lineage4.9
|
None
|
SRR6046521
|
Other
|
lineage4.4.1.1
|
None
|
ERR3468544
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR6045347
|
Other
|
lineage4.9
|
None
|
ERR323064
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR2513470
|
Other
|
lineage4.2.2.2
|
None
|
ERR4817692
|
HR-TB
|
lineage1.1.2;lineage4
|
None
|
ERR4819706
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR9119525
|
MDR-TB
|
lineage4.6.2.2
|
None
|
ERR9786617
|
Other
|
lineage4.1.1.1
|
None
|
ERR3797063
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR161033
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4769450
|
Other
|
lineage4.9
|
None
|
ERR3445503
|
Other
|
La1.7.1;La1.7.X-unk4
|
None
|
SRR5341470
|
MDR-TB
|
lineage4.9;lineage9
|
None
|
ERR3283047
|
Sensitive
|
La3;lineage4.9
|
None
|
ERR6866125
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR3797036
|
HR-TB
|
lineage2.1;lineage4.1.4;lineage4.9
|
None
|
ERR4811035
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.5
|
None
|
ERR502478
|
RR-TB
|
lineage4.9
|
None
|
ERR3797085
|
Other
|
lineage4.9
|
None
|
ERR9786515
|
Other
|
lineage4.1.2.1
|
None
|
SRR6325447
|
MDR-TB
|
lineage2.1;lineage4.1.1.1;lineage6.3
|
None
|
SRR13861500
|
RR-TB
|
lineage4.9
|
None
|
SRR1184380
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4820854
|
Other
|
lineage4.1.2.1
|
None
|
ERR5311082
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.9
|
None
|
ERR867523
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR5818586
|
RR-TB
|
lineage4.2.2.2
|
None
|
ERR11466174
|
Other
|
lineage4.8
|
None
|
ERR176793
|
Other
|
lineage4.1.1.1
|
None
|
SRR5709967
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR9117805
|
Other
|
lineage4.3.2
|
None
|
SRR3675515
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR3439489
|
RR-TB
|
La1.8.1
|
None
|
ERR4596902
|
MDR-TB
|
lineage3
|
None
|
SRR1165699
|
Other
|
lineage4.9
|
None
|
ERR323037
|
Other
|
lineage4.9
|
None
|
ERR108471
|
HR-TB
|
lineage4.9
|
None
|
ERR3804169
|
HR-TB
|
lineage4.1.3
|
None
|
ERR4797201
|
Other
|
lineage1.2.2.2
|
None
|
ERR978767
|
RR-TB
|
lineage4.8
|
None
|
SRR1172885
|
HR-TB
|
lineage4.9
|
None
|
SRR23961542
|
Other
|
La1;lineage4.9
|
None
|
SRR7535086
|
Other
|
|
None
|
ERR4817731
|
HR-TB
|
lineage4.9
|
None
|
ERR2446570
|
Sensitive
|
lineage4.8
|
nl
|
ERR4819528
|
RR-TB
|
lineage3
|
None
|
SRR28119777
|
Other
|
lineage4.9
|
None
|
SRR3675518
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR9786611
|
HR-TB
|
lineage4.1.3
|
None
|
ERR5336148
|
Other
|
lineage2.1;lineage6.3
|
None
|
SRR1172817
|
Other
|
La3
|
None
|
SRR3675450
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR11466499
|
Other
|
lineage4.3.4.1
|
None
|
SRR13861424
|
Sensitive
|
lineage4.9
|
None
|
ERR4797193
|
HR-TB
|
lineage1.1.2
|
None
|
SRR12416840
|
MDR-TB
|
lineage4.9
|
None
|
ERR736867
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR9787153
|
Other
|
lineage6.1.3
|
None
|
SRR11342647
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR3797065
|
RR-TB
|
lineage4.9
|
None
|
ERR2229542
|
Other
|
lineage4.8
|
None
|
ERR978734_ERR978733_ERR978735
|
RR-TB
|
lineage4.8
|
None
|
ERR502532
|
Other
|
M.canetti;lineage2.1;lineage6.3
|
None
|
ERR978746
|
RR-TB
|
lineage4.8
|
None
|
ERR323043
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR5311096
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR3799304
|
Other
|
lineage6.1.1
|
None
|
ERR9786164
|
RR-TB
|
lineage4.1.1.3
|
None
|
ERR5311102
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR6044835
|
Other
|
lineage4.9
|
None
|
ERR4800102
|
Sensitive
|
lineage3.1.2.1
|
None
|
ERR779852
|
Sensitive
|
lineage4.9
|
None
|
ERR4816559
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR13861332
|
Other
|
lineage4.9
|
None
|
SRR3675517
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR3283018
|
HR-TB
|
lineage4.9
|
None
|
SRR1183106
|
RR-TB
|
lineage2.2.1.1
|
None
|
SRR13861138
|
Sensitive
|
lineage4.9
|
None
|
SRR23961549
|
Other
|
La1.2
|
None
|
SRR6046485
|
Other
|
lineage4.9
|
None
|
ERR502912
|
Other
|
lineage2.2.1
|
None
|
ERR323038
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4815815
|
Sensitive
|
lineage4.9
|
None
|
ERR3804155
|
Other
|
lineage4.1.2.1
|
None
|
SRR11342655
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6045233
|
Other
|
M.canetti;lineage4.9
|
None
|
ERR4800527
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR7131023
|
Other
|
lineage4.1.2.1
|
None
|
ERR386953
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR3797081
|
Sensitive
|
lineage4.9
|
None
|
SRR11662690
|
HR-TB
|
lineage4.9
|
None
|
SRR6325448
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
SRR26159047
|
Other
|
lineage4.6.3;lineage4.9
|
None
|
ERR11252612
|
Other
|
La3;lineage4.9
|
None
|
ERR4817069
|
RR-TB
|
|
None
|
ERR2514692
|
Other
|
|
None
|
ERR978757
|
RR-TB
|
lineage4.8
|
None
|
SRR1172857
|
Other
|
|
None
|
ERR212033
|
Other
|
lineage4.9
|
None
|
SRR6325442
|
HR-TB
|
lineage2.1;lineage4.1.1.1;lineage6.3
|
None
|
SRR28119805
|
Other
|
lineage4.9
|
None
|
SRR1173153
|
Other
|
lineage4.9
|
None
|
SRR28119752
|
Other
|
lineage4.9
|
None
|
ERR4769442
|
Sensitive
|
lineage4.9
|
None
|
ERR473314
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4814352
|
Other
|
lineage2.2.1
|
None
|
ERR126600
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1173633
|
Other
|
lineage4.9
|
None
|
ERR736875
|
HR-TB
|
lineage4.9
|
None
|
ERR736835
|
HR-TB
|
La1.7;M.canetti;lineage4.9
|
None
|
SRR1181289
|
Other
|
lineage2.2.1
|
None
|
SRR12006550
|
Sensitive
|
lineage1.2.1.2
|
None
|
SRR6045555
|
Other
|
lineage4.9
|
None
|
SRR7240492
|
HR-TB
|
La1.7.1
|
None
|
SRR21677886
|
Sensitive
|
lineage4.9
|
None
|
ERR473332
|
Other
|
lineage4.9
|
None
|
ERR323055
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR702404
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR3797086
|
Sensitive
|
lineage4.9
|
None
|
ERR4769452
|
Other
|
lineage4.9
|
None
|
ERR4798493
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3283017
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9
|
None
|
ERR4819383
|
RR-TB
|
lineage4.9
|
None
|
SRR1184346
|
HR-TB
|
lineage3.1
|
None
|
ERR9992879
|
XDR-TB
|
lineage4.3.3
|
None
|
ERR212125
|
HR-TB
|
lineage4.9
|
None
|
ERR9786645
|
Other
|
lineage4.6.2.2
|
None
|
SRR23961559
|
Other
|
La1.7;lineage4.2
|
None
|
SRR3675490
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR6046225
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR978726_ERR978727
|
RR-TB
|
lineage4.8
|
None
|
SRR13861506
|
RR-TB
|
lineage4.9
|
None
|
SRR1180147
|
Other
|
lineage2.2.1.1
|
None
|
SRR1184294
|
Other
|
lineage4.9
|
None
|
ERR3283057
|
Sensitive
|
La3;lineage4.9
|
None
|
SRR1196478
|
Other
|
lineage4.9
|
None
|
SRR3675320
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9
|
None
|
ERR5311090
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR323033
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR3077978
|
RR-TB
|
lineage1.1
|
None
|
ERR1873393
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4798262
|
HR-TB
|
La1.2.BCG
|
None
|
ERR3283006
|
RR-TB
|
lineage4.9
|
None
|
ERR323054
|
MDR-TB
|
La3;M.canetti;lineage3.1
|
None
|
ERR323041
|
HR-TB
|
M.canetti;lineage2.1
|
None
|
ERR4819863
|
RR-TB
|
lineage4.9
|
None
|
ERR978754
|
RR-TB
|
lineage4.8
|
None
|
ERR3324368
|
RR-TB
|
lineage1.1.2;lineage6.2.3
|
None
|
ERR4814536
|
MDR-TB
|
M.canetti;lineage2.1;lineage3
|
None
|
ERR3797070
|
Other
|
lineage4.9
|
None
|
ERR9119096
|
RR-TB
|
lineage4.3.3
|
None
|
SRR13861553
|
Other
|
lineage4.9
|
None
|
ERR3283025
|
MDR-TB
|
La1.7;lineage4.9
|
None
|
ERR9119500
|
MDR-TB
|
lineage5.2
|
None
|
ERR9786843
|
Other
|
|
None
|
SAMEA3501067
|
RR-TB
|
lineage4.8
|
None
|
SRR1184381
|
MDR-TB
|
|
None
|
SRR3675221
|
Other
|
lineage4.9
|
None
|
SRR3675554
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR987722
|
MDR-TB
|
|
None
|
SRR25827682
|
Other
|
|
None
|
SRR28351339
|
MDR-TB
|
lineage4
|
None
|
ERR9787197
|
Other
|
|
None
|
SRR6789621
|
Other
|
lineage4.9
|
None
|
ERR4817060
|
Other
|
|
None
|
ERR234659
|
Other
|
|
None
|
ERR6359045
|
Other
|
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3
|
None
|
SRR8552928
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR9971122
|
MDR-TB
|
lineage4.8
|
None
|
ERR4818536
|
Other
|
lineage4.9
|
None
|
ERR11465024
|
Other
|
lineage4.1.1.3
|
None
|
SRR29093105
|
Other
|
lineage2.2.2;lineage4
|
None
|
ERR124652
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR181824
|
HR-TB
|
lineage4.9
|
None
|
ERR9786601
|
Other
|
lineage4.1.2.1
|
None
|
SRR1162864
|
Other
|
lineage4.1.2.1
|
None
|
SRR13861149
|
RR-TB
|
lineage4.9
|
None
|
SRR13861396
|
HR-TB
|
lineage4.9
|
None
|
SRR28119756
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR3078008
|
MDR-TB
|
lineage4.6.1.1
|
None
|
ERR3801503
|
Sensitive
|
lineage4.6.2.2
|
None
|
ERR4819462
|
Sensitive
|
lineage4.9
|
None
|
ERR9786421
|
Other
|
lineage4.1.2.1
|
None
|
ERR978734
|
RR-TB
|
lineage4.8
|
None
|
SRR12634609
|
MDR-TB
|
lineage3.1.1
|
None
|
ERR2513229
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR323047
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR3445502
|
Sensitive
|
lineage4.9;lineage7
|
None
|
ERR4819422
|
HR-TB
|
lineage4.9
|
None
|
ERR4819781
|
Other
|
lineage2.2.1
|
None
|
ERR736865
|
HR-TB
|
lineage4.3.2;lineage4.9
|
None
|
ERR9786525
|
Other
|
lineage4.1;lineage4.8
|
None
|
SRR1184372
|
MDR-TB
|
|
None
|
SRR18913742
|
Sensitive
|
lineage3.1.3
|
None
|
SRR6046397
|
Other
|
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
|
None
|
SRR7496523
|
Other
|
lineage4.7
|
None
|
SRR13861168
|
RR-TB
|
lineage4.9
|
None
|
SRR1173453
|
Other
|
lineage4.4.1.1
|
None
|
SRR11342693
|
MDR-TB
|
lineage4.8.1
|
None
|
ERR126618
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR6045948
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR25827605
|
Pre-XDR-TB
|
lineage2.2.1;lineage3;lineage4
|
None
|
SRR6325444
|
MDR-TB
|
M.canetti;lineage2.1;lineage6.3
|
None
|
ERR760733
|
MDR-TB
|
lineage4.1.2.1.1
|
None
|
SRR1172728
|
RR-TB
|
La3
|
None
|
ERR6358951
|
Sensitive
|
lineage4.9
|
None
|
ERR4188350
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4813263
|
MDR-TB
|
lineage4.8
|
None
|
ERR4769493
|
Other
|
lineage4.9
|
None
|
ERR978766
|
RR-TB
|
lineage4.8
|
None
|
ERR9786711
|
Sensitive
|
lineage4.6.2.2
|
None
|
ERR3797064
|
Other
|
La3;lineage4.9
|
None
|
SRR1173767
|
MDR-TB
|
lineage4.4.1.1
|
None
|
ERR978767_ERR978765_ERR978766
|
RR-TB
|
lineage4.8
|
None
|
SRR13583478
|
HR-TB
|
lineage4.3.4.1
|
None
|
ERR176643
|
Other
|
La3;lineage4.9
|
None
|
ERR736859
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4798139
|
RR-TB
|
lineage1.1.2
|
None
|
ERR4872094
|
MDR-TB
|
lineage5.2
|
None
|
ERR3468488
|
Other
|
La1.8.1
|
None
|
ERR3290633
|
Other
|
lineage4.2;lineage4.6.3;lineage4.9.1
|
None
|
ERR3797062
|
RR-TB
|
lineage4.9
|
None
|
ERR133825
|
HR-TB
|
La1;lineage4.9
|
None
|
ERR5311099
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4819546
|
HR-TB
|
lineage3
|
None
|
ERR1063849
|
HR-TB
|
lineage4.9
|
None
|
ERR9117709
|
Other
|
|
None
|
ERR176766
|
HR-TB
|
lineage2.1;lineage4.9
|
None
|
SRR11342696
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
ERR126597
|
HR-TB
|
lineage4.4.1.2
|
None
|
ERR3797047
|
MDR-TB
|
lineage4.9
|
None
|
SRR1173400
|
Other
|
lineage4.9
|
None
|
SRR3675581
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR11342644
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR13861341
|
RR-TB
|
lineage4.9
|
None
|
SRR9970978
|
Sensitive
|
La1;lineage4.1.2
|
None
|
SRR7496509
|
Other
|
|
None
|
ERR176751
|
Other
|
lineage4.9
|
None
|
ERR13265748
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR12015083
|
Other
|
La3;lineage4.8
|
None
|
SRR16156697
|
RR-TB
|
lineage2.2.1
|
None
|
SRR1184329
|
Other
|
lineage4.9
|
None
|
SRR12708389
|
MDR-TB
|
lineage4.8.1
|
None
|
ERR1034634
|
HR-TB
|
lineage4.9
|
None
|
SRR29017461
|
Other
|
La3;lineage4.9
|
None
|
SRR3675494
|
RR-TB
|
lineage4.9
|
None
|
ERR1334034
|
Other
|
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3
|
None
|
ERR4797054
|
Pre-XDR-TB
|
lineage2.1
|
None
|
SRR5341302
|
Other
|
La3;lineage2.1;lineage4.9
|
None
|
SRR6045785
|
MDR-TB
|
lineage4.2;lineage4.8.1;lineage4.9
|
None
|
ERR8976043
|
HR-TB
|
lineage2.1;lineage2.2;lineage6.3
|
None
|
ERR9786656
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR9787030
|
RR-TB
|
lineage6.1.2
|
None
|
SRR3675311
|
Other
|
lineage4.9
|
None
|
ERR5908228
|
RR-TB
|
lineage4.3.3
|
None
|
SRR1183144
|
Other
|
lineage2.2.1
|
None
|
SRR7496472
|
Other
|
lineage4.9
|
None
|
SRR6079962
|
HR-TB
|
lineage2.2.1.1
|
None
|
SAMEA3501070
|
RR-TB
|
lineage4.8
|
None
|
ERR736831
|
Other
|
lineage4.9
|
None
|
ERR4815556
|
RR-TB
|
lineage3
|
None
|
SRR5341456
|
Other
|
lineage4.9
|
None
|
SRR6046026
|
RR-TB
|
lineage4.2;lineage4.9
|
None
|
SAMEA3501052
|
RR-TB
|
lineage4.8
|
None
|
ERR11252558
|
Other
|
lineage4.6.3;lineage4.9
|
None
|
SRR12416824
|
HR-TB
|
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
|
None
|
SAMEA3501046
|
RR-TB
|
lineage4.8
|
None
|
SRR14066533
|
Sensitive
|
lineage1.1.1
|
None
|
SRR1735598
|
RR-TB
|
lineage4.9
|
None
|
ERR9786642
|
Other
|
lineage4.1.2.1
|
None
|
ERR4769497
|
Other
|
La1;lineage4.9
|
None
|
ERR502908
|
HR-TB
|
lineage2.2.1
|
None
|
ERR5917985
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR9786671
|
Other
|
|
None
|
SRR12142341
|
HR-TB
|
lineage2.1
|
None
|
SRR6044815
|
Other
|
lineage4.9
|
None
|
SRR6046295
|
HR-TB
|
lineage4.2;lineage4.9
|
None
|
ERR176549
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR176778
|
HR-TB
|
lineage4.9
|
None
|
SRR17567917
|
RR-TB
|
lineage4.4.1.1
|
None
|
SRR3675487
|
Other
|
M.canetti;lineage4.9
|
None
|
SRR6046305
|
Sensitive
|
lineage4.9
|
None
|
ERR9786440
|
Other
|
lineage4.1
|
None
|
ERR9786604
|
Other
|
|
None
|
SRR1049726
|
Other
|
lineage4.1.2.1;lineage4.4.1.1
|
None
|
ERR2513405
|
Other
|
lineage2.2.1
|
None
|