Rv0667 - c.1344A>C


Drug resistance types
38 Sensitive 130 RR-TB 95 HR-TB 156 MDR-TB 14 Pre-XDR-TB 2 XDR-TB 219 Other
lineage Counts
lineage Count
lineage4.8 41
La1.2 1
lineage4.9 176
lineage2.1;lineage4.9 20
La3;lineage2.1;lineage4.9 3
lineage2.2.1 34
M.canetti;lineage2.1;lineage4 1
lineage4.4.1.1 5
lineage2.1 5
lineage6.1.3 3
lineage2.2.2 1
lineage2.2.1;lineage3;lineage4 1
lineage2.2.1.1 3
lineage4.9.1 1
La3;M.canetti;lineage2.1;lineage4.9 12
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage4.4.2 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
M.canetti;lineage2.1;lineage4.9 26
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
lineage4.3.4.2.1 2
lineage4.1.2.1 20
lineage4.6.3;lineage4.9 2
M.canetti;lineage4.9 4
lineage3.1.3 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4 7
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 5
La1;lineage2;lineage4.9 1
lineage4.9;lineage6.3 7
La1.2.BCG;La1.8.1 1
La1.8.1 5
lineage4.9;lineage9 2
lineage4.1.1.1 6
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
lineage4.2.2.2 3
lineage3.1 1
La1.7.1;La1.7.X-unk4 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage4.1.1.3 5
lineage4.8.1 3
lineage4.3.3 7
La2;lineage4.9 2
lineage4.1.1.3.1;lineage4.9 1
lineage4.1.2.1;lineage4.4.1.1 1
lineage3 13
La1;lineage4.9 4
lineage4.1 1
lineage4.3.4.1 2
lineage5.2 2
La3;lineage2 1
lineage4.2;lineage4.9 3
La3;M.canetti;lineage2.2.1 1
lineage2.1;lineage4.9;lineage6.3 10
lineage6.1.1 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
La2;lineage2.2 1
La3;M.canetti;lineage2.1;lineage3.1 1
La3;lineage4.9 14
lineage4.7 2
lineage4.3.4.2 2
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage3.1.2.1 2
lineage4.6.5 1
lineage1.1;lineage4 1
lineage4.3 1
lineage2.2;lineage4 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.2.1 2
lineage4.8.2 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.2 1
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage3.1.2.1;lineage3.1.2.2 1
lineage2.2.1;lineage3 1
lineage4.1;lineage4.8 2
lineage2.2.1;lineage6.3 1
lineage4.9;lineage6.1.3 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.8;lineage4.9 1
lineage4.6.2.2 5
lineage1.1.3.2 1
lineage4.3.2;lineage4.9 1
lineage2.2.1.2;lineage7 1
lineage4.3.2 1
lineage4.9;lineage7 1
lineage1.2.1.2 1
lineage1.1.2 3
M.canetti;lineage2.1;lineage6.3 2
La1.7;lineage4.9 5
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage1.1.1 1
lineage4.3.1;lineage4.9;lineage6 1
lineage4.4.1.1.1 2
lineage4.2;lineage4.6.3;lineage4.9 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage3.1.1 1
lineage1.1.2;lineage6.2.3 1
La3;lineage4.8 2
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage4.3.2.1 1
lineage6.3.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.2 3
lineage2.1;lineage6.3 2
La3;lineage1.1.2 1
La3;M.canetti;lineage4.9 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.6.1.1 2
lineage4.1.3 2
lineage1;lineage4.9 1
lineage3.1.2.2 1
M.canetti;lineage4.3.1;lineage4.9 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage2.2.1;lineage4.5 1
M.canetti;lineage4.2;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.2.1 1
La2;lineage4.9;lineage9 1
lineage5 1
La1.7.1;lineage4.9 1
lineage4.1.2.1.1 1
La3 2
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4.4.1.2 1
lineage2.1;lineage4.3.2 1
lineage4.1.2 2
lineage1.2.2.2 1
M.canetti;lineage2.1 1
La1.7;lineage4.2 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage1.1 1
lineage4.1.1.3.1 2
29
La1.7;M.canetti;lineage4.9 1
La1.6 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.1.1.2 1
La1.7.1 1
La3;M.canetti;lineage3.1 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3;lineage4 1
lineage4.1.2.1;lineage4.4.1 1
La3;lineage2.1;lineage6.3 1
lineage1.1.2;lineage4 1
La1;lineage4.1.2 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage4.2;lineage4.8.1;lineage4.9 2
lineage6.1.2 1
lineage4.6.3;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage3 1
La1.2.BCG 1
lineage4.3.4 1
lineage2.1;lineage2.2;lineage6.3 1
spoligotype Counts
spoligotype Count
None 654
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR2517514 Sensitive lineage4.8 None
SRR23961549 Other La1.2 None
SRR3675549 Other lineage4.9 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR13423649 Other lineage2.2.1 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
SRR6046046 Other lineage4.9 None
SRR1173453 Other lineage4.4.1.1 None
SRR1710057 Other lineage2.1 None
ERR9787336 RR-TB lineage6.1.3 None
ERR2693252 HR-TB lineage4.9 None
SRR6046492 Other lineage4.9 None
ERR502481 RR-TB lineage4.9 None
SRR16156697 RR-TB lineage2.2.1 None
SRR18910194 HR-TB lineage2.2.2 None
SRR18003019 Other lineage2.2.1 None
SRR6046878 Other lineage4.9 None
SRR25827605 Pre-XDR-TB lineage2.2.1;lineage3;lineage4 None
SRR6079962 HR-TB lineage2.2.1.1 None
ERR4769554 RR-TB lineage4.9 None
ERR245758 Other lineage4.9.1 None
ERR124652 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR4817735 Other lineage4.8 None
SRR15316595 RR-TB lineage4.4.2 None
ERR4817896 HR-TB lineage2.2.1 None
SRR1169194 Other lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675558 MDR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
ERR4820773 HR-TB lineage4.9 None
SRR6045832 Other lineage4.9 None
SRR3675482 RR-TB lineage4.9 None
SAMEA3501073 RR-TB lineage4.8 None
ERR176549 Other lineage4.3.4.2.1 None
SRR6046141 Other lineage4.9 None
ERR6866410 HR-TB lineage4.9 None
ERR323063 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1163221 MDR-TB lineage4.1.2.1 None
SRR1173633 Other lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
SRR26159047 RR-TB lineage4.6.3;lineage4.9 None
SRR12142339 HR-TB lineage2.2.1 None
SRR3675487 MDR-TB M.canetti;lineage4.9 None
SRR18913742 Sensitive lineage3.1.3 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR3283044 Other lineage4 None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675269 RR-TB lineage4.9 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR3675545 RR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323115 Sensitive lineage4.9 None
ERR9119669 MDR-TB lineage4.9 None
ERR978761_ERR978762_ERR978760 RR-TB lineage4.8 None
SRR1184312 Other lineage2.2.1 None
ERR5311089 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR3797016 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR15368973 Other lineage4.9 None
ERR4816762 Sensitive lineage4.9 None
SRR3675506 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR181887 Other lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
ERR3797023 MDR-TB La1.8.1 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR3283030 HR-TB lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
SRR11342651 MDR-TB lineage4.1.1.1 None
ERR978755_ERR978756_ERR978754_ERR978757 RR-TB lineage4.8 None
SRR16156817 Other lineage4.9 None
ERR502912 Other lineage2.2.1 None
ERR176658 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR11342660 MDR-TB lineage2.2.1 None
ERR2513470 Other lineage4.2.2.2 None
SRR6045219 HR-TB lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
SRR26159063 RR-TB lineage4.9 None
SRR6789621 Other lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR1175052 HR-TB lineage4.9 None
SRR7496471 Sensitive lineage4 None
ERR502473 RR-TB lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR5311096 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3797085 Other lineage4.9 None
ERR323058 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR1873393 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR4816551 MDR-TB lineage4.1.1.3 None
SRR1166821 RR-TB lineage4.1.2.1 None
SRR7496472 Other lineage4.9 None
SRR11342653 MDR-TB lineage2.2.1 None
ERR323036 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6046521 Other lineage4.4.1.1 None
SRR11342693 MDR-TB lineage4.8.1 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR1172951 Other lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
SRR21732980 Other lineage4.3.3 None
ERR4819877 HR-TB lineage4.9 None
ERR502474 RR-TB lineage4.9 None
ERR176751 HR-TB lineage4.9 None
SRR1184308 RR-TB lineage4.9 None
ERR978767 RR-TB lineage4.8 None
ERR323039 MDR-TB La2;lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR5007161 RR-TB lineage4.1.1.3.1;lineage4.9 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR4817731 HR-TB lineage4.9 None
ERR2446570 Sensitive lineage4.8 nl
SRR10808399 Sensitive lineage4.9 None
SRR1181289 RR-TB lineage2.2.1 None
ERR6358951 Sensitive lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR1049726 Other lineage4.1.2.1;lineage4.4.1.1 None
SRR6044875 Other lineage4.9 None
ERR4819546 HR-TB lineage3 None
ERR133825 HR-TB La1;lineage4.9 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
SAMEA3501067 RR-TB lineage4.8 None
SRR6044815 RR-TB lineage4.9 None
ERR9786440 Other lineage4.1 None
ERR11466499 Other lineage4.3.4.1 None
ERR9119500 MDR-TB lineage5.2 None
SRR20969677 HR-TB La3;lineage2 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
ERR4769493 Other lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR10808668 Other lineage2.2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR9787014 RR-TB lineage6.1.1 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR212033 Other lineage4.9 None
SRR3675322 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR4818929 HR-TB lineage4.9 None
ERR3797065 RR-TB lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
ERR4819932 Other lineage4.7 None
SRR1173355 Other lineage4.9 None
ERR9786592 Other lineage4.3.4.2 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR4821053 RR-TB lineage3 None
ERR4816717 RR-TB lineage3.1.2.1 None
SRR5266542 Pre-XDR-TB lineage2.2.1 ru
ERR4798504 RR-TB lineage3 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4815556 RR-TB lineage3 None
ERR3797048 Other La3;lineage4.9 None
ERR7801176 RR-TB lineage4.6.5 None
SRR3675561 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9896144 Other lineage3 None
ERR978726 RR-TB lineage4.8 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR702406 Other lineage2.1 None
ERR4800102 Sensitive lineage3.1.2.1 None
SRR1167384 Other La3;lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR2693228 RR-TB lineage4.9 None
ERR4819322 Other lineage1.1;lineage4 None
SRR1172310 MDR-TB lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR978757 RR-TB lineage4.8 None
SRR6046305 Sensitive lineage4.9 None
ERR3275941 RR-TB lineage4.3 nl
SRR1735596 RR-TB lineage4.9 None
SRR5341332 Pre-XDR-TB lineage3 None
SRR16156832 RR-TB lineage2.2;lineage4 None
SRR1791696 RR-TB La1.8.1 None
ERR3439489 RR-TB La1.8.1 None
ERR990545 RR-TB lineage3 None
SRR6045555 Other lineage4.9 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR5007169 RR-TB lineage4.8.2 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR23961542 Other La1;lineage4.9 None
ERR2513405 Other lineage2.2.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786627 Other lineage4.1.2.1 None
SRR6045526 Other lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR4818536 Other lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR4818561 Sensitive lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
SRR6046066 Other lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
SRR10315751 MDR-TB lineage4.8 None
ERR3283016 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6045002 RR-TB lineage4.9 None
ERR9786164 RR-TB lineage4.1.1.3 None
ERR4769521 RR-TB lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
ERR978765 RR-TB lineage4.8 None
ERR176643 Other La3;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR6046593 Other lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR386953 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4819528 RR-TB lineage3 None
SRR13861149 RR-TB lineage4.9 None
ERR3799304 RR-TB lineage6.1.1 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR11342636 MDR-TB lineage4.3.3 None
ERR4819706 MDR-TB lineage4.3.4.2 None
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR176778 HR-TB lineage4.9 None
ERR502478 RR-TB lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
SRR10808805 Other La1;lineage4.9 None
ERR4818259 RR-TB lineage4.1.1.1 None
ERR736875 HR-TB lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR176793 Other lineage4.1.1.1 None
ERR7821123 Other lineage1.1.3.2 None
ERR2446566 Other lineage4.9 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR9117805 Other lineage4.3.2 None
ERR9786525 RR-TB lineage4.1;lineage4.8 None
ERR2229143 RR-TB lineage4.9 None
ERR3797070 Other lineage4.9 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR4815079 RR-TB lineage3 None
ERR323107 HR-TB lineage4.9 None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR12006550 Other lineage1.2.1.2 None
ERR323037 Other lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
SRR1196566 Other lineage4.9 None
ERR11466174 Other lineage4.8 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR3801503 Other lineage4.6.2.2 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR3283014 Other La3;lineage4.9 None
ERR978766 RR-TB lineage4.8 None
SRR10809074 HR-TB lineage4.9 None
ERR4819462 Sensitive lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3804155 Other lineage4.1.2.1 None
ERR4798139 RR-TB lineage1.1.2 None
ERR3468488 Other La1.8.1 None
ERR11049020 Other lineage4.8 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR14066533 RR-TB lineage1.1.1 None
ERR3797062 RR-TB lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR9786694 Other lineage4.1.2.1 None
ERR4821276 Sensitive lineage3 None
SRR3675457 Other lineage4.9 None
SRR21677886 Sensitive lineage4.9 None
SRR12634609 MDR-TB lineage3.1.1 None
SRR1172234 Other lineage4.9 None
ERR3324368 RR-TB lineage1.1.2;lineage6.2.3 None
ERR473332 Other lineage4.9 None
ERR12015083 Other La3;lineage4.8 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1180147 RR-TB lineage2.2.1.1 None
SRR3675450 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR13861396 HR-TB lineage4.9 None
ERR3797086 Sensitive lineage4.9 None
ERR11081258 Other lineage4.8 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR3468607 RR-TB lineage4.9 None
SRR11349147 RR-TB lineage4.3.2.1 None
SRR13861332 Other lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR9787139 Other lineage6.3.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR3675270 Other lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
ERR3275201 Sensitive lineage4.8 nl
SRR19303884 Other lineage2.1;lineage6.3 None
ERR5162090 RR-TB lineage4.9 None
ERR3797083 RR-TB lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR1196677 Other lineage2.2 None
ERR9786569 Other lineage4.8 None
ERR2513229 MDR-TB lineage2.2.1 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR5311098 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3797015 HR-TB lineage4.9 None
ERR4596902 MDR-TB lineage3 None
ERR176741 Other lineage4.9 None
SRR11342642 MDR-TB lineage4.1.1.1 None
SRR3675214 Other lineage4.9 None
SRR6046225 Other lineage4.9;lineage6.3 None
ERR067712 Sensitive lineage4.9 None
SRR3675444 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
ERR323047 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR323060 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR978750_ERR978752_ERR978751 RR-TB lineage4.8 None
SRR13861424 Sensitive lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR13861341 RR-TB lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
SRR26159043 Other lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR5917985 MDR-TB lineage2.2.1 None
SRR3675486 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1173400 Other lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR3797063 Other La3;lineage4.9 None
SRR1173384 Other lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR3283011 Other La3;lineage4.9 None
SRR3675248 Other lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR4811035 Pre-XDR-TB lineage2.2.1;lineage4.5 None
ERR3797043 Sensitive lineage4.9 None
ERR553132 MDR-TB lineage4.1.2.1 None
SRR13861500 RR-TB lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR5917710 RR-TB lineage4.1.2.1 None
ERR3078008 MDR-TB lineage4.6.1.1 None
SRR1173687 Pre-XDR-TB lineage2.2.1 None
ERR867570 RR-TB lineage4.9 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
SRR13861553 RR-TB lineage4.9 None
SRR13861168 RR-TB lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
SRR5818586 RR-TB lineage4.2.2.2 None
ERR1063862 HR-TB lineage4.9 None
SRR6785263 Sensitive lineage2.2.1 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR6785268 Sensitive lineage4.2.1 None
SRR5709967 MDR-TB lineage2.2.1 None
ERR5311077 Other La1.8.1 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
SRR1173153 Other lineage4.9 None
SRR3675221 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SAMEA3501063 RR-TB lineage4.8 None
ERR4821272 RR-TB lineage4.1.2.1 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR6358837 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR9786421 Other lineage4.1.2.1 None
SRR1165699 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR4816967 Other lineage5 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3797081 Sensitive lineage4.9 None
ERR3468544 RR-TB lineage2.1;lineage4.9 None
ERR736831 Other lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
SRR1172728 RR-TB La3 None
ERR8665994 RR-TB lineage4.9 None
ERR4813263 MDR-TB lineage4.8 None
ERR4814352 Other lineage2.2.1 None
ERR3797064 Other La3;lineage4.9 None
SRR1173767 MDR-TB lineage4.4.1.1 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283042 HR-TB lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR9786611 HR-TB lineage4.1.3 None
ERR126597 HR-TB lineage4.4.1.2 None
ERR3797047 MDR-TB lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
SRR1162864 MDR-TB lineage4.1.2.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR19303820 RR-TB lineage4.8 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
SRR11342658 RR-TB lineage4.1.2 None
SRR5485614 RR-TB lineage4.9 None
ERR4797201 Other lineage1.2.2.2 None
ERR323041 MDR-TB M.canetti;lineage2.1 None
SRR11342647 MDR-TB lineage4.1.1.3 None
SRR1196546 Other lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
ERR978734_ERR978733_ERR978735 RR-TB lineage4.8 None
ERR4769452 Other lineage4.9 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4797588 MDR-TB lineage3 None
SRR6044835 Other lineage4.9 None
ERR4188350 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4815752 Other lineage4.9 None
SRR6045191 Sensitive lineage4.9 None
ERR11465024 Other lineage4.1.1.3 None
ERR9787165 Other lineage6.1.3 None
ERR212125 HR-TB lineage4.9 None
ERR126608 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR23961559 Other La1.7;lineage4.2 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR978726_ERR978727 RR-TB lineage4.8 None
ERR5908228 RR-TB lineage4.3.3 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675515 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SAMEA3501070 RR-TB lineage4.8 None
SRR3675243 MDR-TB lineage4.9 None
SRR6045952 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
SRR1183144 RR-TB lineage2.2.1 None
ERR4819241 Other lineage4.9 None
ERR473314 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR9786645 Other lineage4.6.2.2 None
SRR11342655 MDR-TB lineage2.2.1 None
ERR978761 Other lineage4.8 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
SRR11662690 HR-TB lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786617 Other lineage4.1.1.1 None
ERR323038 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR9119096 RR-TB lineage4.3.3 None
SRR3675554 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4769442 Sensitive lineage4.9 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR6045359 HR-TB lineage4.9 None
SRR6045053 Other lineage4 None
SRR1184381 MDR-TB None
ERR4818615 Sensitive None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
SRR1173363 Other None
ERR9786843 Other None
ERR2514692 Other None
SRR18213713 HR-TB None
ERR987722 MDR-TB None
SRR28351339 MDR-TB lineage4 None
SRR1172857 Other None
SRR7496517 Other None
ERR4407463 HR-TB None
SRR28119805 Other lineage4.9 None
SRR1196768 MDR-TB None
SRR6045795 Other lineage2.2.1 None
ERR6866807 RR-TB lineage4.9 None
ERR9786444 Sensitive lineage4.8 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1035157 Other lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
SRR13861284 RR-TB lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
SRR13861484 Sensitive lineage4.9 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR779852 HR-TB lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR10993951 RR-TB La1.6 None
ERR4821172 RR-TB lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR2513382 RR-TB lineage4.1.1.3 None
ERR4817893 Other La3;lineage4.8 None
ERR4818252 HR-TB lineage4.1.1.2 None
SRR3675507 RR-TB lineage4.9 None
ERR502908 HR-TB lineage2.2.1 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
SRR1196478 Other lineage4.9 None
ERR5311083 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR13861138 Sensitive lineage4.9 None
SRR7240492 MDR-TB La1.7.1 None
SRR6046485 Other lineage4.9 None
ERR3283006 RR-TB lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR4815815 Sensitive lineage4.9 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR6045233 Other M.canetti;lineage4.9 None
SRR3675464 MDR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR3675568 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR3283028 Other La3;lineage4 None
SRR1173788 Sensitive lineage4.9 None
ERR3797080 Sensitive lineage4.9 None
ERR9786671 Other None
ERR9786604 Other None
ERR4815604 Other None
ERR11252612 Other La3;lineage4.9 None
ERR4817069 RR-TB None
SRR1640750 RR-TB None
SRR1184372 MDR-TB None
ERR9117709 Other None
SRR6789626 Other None
ERR4796577 HR-TB None
ERR234659 HR-TB None
SRR7535086 Other None
SRR25827682 Other None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
ERR323040 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SAMEA3501065 RR-TB lineage4.8 None
ERR278594 MDR-TB lineage2.1;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4817692 MDR-TB lineage1.1.2;lineage4 None
ERR176766 MDR-TB lineage2.1;lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR978733 RR-TB lineage4.8 None
SRR3675275 Other lineage4.9 None
ERR4800341 HR-TB lineage3 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR978746_ERR978747_ERR978748 RR-TB lineage4.8 None
ERR4810624 MDR-TB lineage2.2 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR6458423 HR-TB lineage2.2.1 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR9970978 Other La1;lineage4.1.2 None
SRR1184329 Other lineage4.9 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR4818347 Other lineage4.1.2 None
ERR978734 RR-TB lineage4.8 None
SRR3675494 RR-TB lineage4.9 None
ERR9787153 Other lineage6.1.3 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR2229542 Other lineage4.8 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR978746 RR-TB lineage4.8 None
SRR1180137 RR-TB lineage2.2.1 None
ERR978750 RR-TB lineage4.8 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
SRR3416776 Other lineage2.1 None
ERR9786711 Other lineage4.6.2.2 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
ERR4819383 RR-TB lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR9971122 MDR-TB lineage4.8 None
SRR1172817 Other La3 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR9992879 XDR-TB lineage4.3.3 None
ERR9786601 Other lineage4.1.2.1 None
ERR9787030 RR-TB lineage6.1.2 None
SRR3675311 Other lineage4.9 None
ERR473323 HR-TB lineage4.9 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR13861506 RR-TB lineage4.9 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR3275196 RR-TB lineage2.2.1 nl
SRR1183106 RR-TB lineage2.2.1.1 None
ERR1034634 HR-TB lineage4.9 None
SRR6046594 Other lineage4.9 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3283021 MDR-TB lineage4.9 None
SRR1735598 RR-TB lineage4.9 None
ERR11466146 Other lineage4.3.4.2.1 None
ERR4819863 RR-TB lineage4.9 None
ERR978754 RR-TB lineage4.8 None
SRR7131023 Other lineage4.1.2.1 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR7496523 Other lineage4.7 None
ERR9786682 Other lineage4.1.2.1 None
ERR978760 RR-TB lineage4.8 None
SRR5341456 Other lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
SAMEA3501052 RR-TB lineage4.8 None
ERR736856 HR-TB lineage4.9 None
SAMEA3501046 RR-TB lineage4.8 None
ERR181824 MDR-TB lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
SRR7496509 Other None
SRR3675572 Other None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR9787197 Other None
SRR3675236 Other None
ERR4816999 Other None
ERR4817060 Other None
SRR28119777 Other lineage4.9 None
ERR6358979 HR-TB lineage4.9 None
SRR1196583 Other lineage4.9 None
SRR21733183 RR-TB lineage1.1.2 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
SRR11342662 MDR-TB lineage4.8.1 None
ERR978755 RR-TB lineage4.8 None
SRR13861510 Other lineage4.9 None
SRR17567917 RR-TB lineage4.4.1.1 None
ERR9786515 Other lineage4.1.2.1 None
ERR736817 HR-TB lineage4.3.4 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None