lineage | Count |
---|---|
lineage2.2 | 4 |
26 | |
lineage2.2.1 | 4 |
lineage1.2.1.2 | 1 |
lineage4.3.4.1 | 1 |
lineage4.3.4 | 1 |
lineage3 | 4 |
lineage4.9 | 11 |
lineage4.1 | 1 |
lineage4 | 20 |
lineage4.1.2 | 1 |
lineage4.8 | 1 |
lineage4.2.1 | 2 |
lineage4.6.2.2 | 2 |
La2 | 1 |
lineage6.1.1 | 2 |
lineage4.5 | 1 |
lineage3.1.2 | 1 |
lineage4.8;lineage4.1 | 2 |
lineage4.1.2.1 | 1 |
lineage3.1.2.2;lineage3.1.2.1 | 1 |
lineage4.4.1.1 | 1 |
spoligotype | Count |
---|---|
None | 89 |
ID | Drug resistance | Lineage | Country iso2 | SRR1183049 | Other | lineage2.2 | None | SRR1172310 | HR-TB | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1174897 | HR-TB | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR17832802 | HR-TB | lineage3 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675488 | HR-TB | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675477 | Other | lineage4.9 | None | SRR3675229 | Other | lineage4 | None | ERR181744 | HR-TB | None | SRR3675222 | Other | None | SRR3675501 | HR-TB | None | SRR3675279 | Other | None | ERR176740 | HR-TB | None | SRR3675387 | Sensitive | None | SRR3675542 | Other | lineage4.9 | None | SRR3675522 | Other | None | ERR2179853 | Other | lineage3 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR212034 | HR-TB | None | ERR4820711 | HR-TB | lineage4.1.2 | None | ERR4816466 | HR-TB | None | ERR2229178 | Sensitive | lineage4.8 | None | ERR2512770 | Other | lineage4.2.1 | None | SRR6045706 | Sensitive | lineage4 | None | SRR5341470 | HR-TB | None | ERR2517475 | Other | lineage4 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046245 | Other | lineage4.9 | None | SRR6044925 | Sensitive | lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR6046802 | Other | lineage4 | None | ERR4830353 | Other | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR363421 | Sensitive | lineage4 | None | ERR502524 | HR-TB | La2 | None | ERR323108 | HR-TB | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1063862 | HR-TB | None | ERR349300 | Sensitive | lineage4.9 | None | ERR4831638 | Sensitive | None | ERR323039 | HR-TB | None | ERR323053 | HR-TB | None | ERR1063858 | HR-TB | None | ERR3283040 | HR-TB | None | ERR369158 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369163 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR400320 | Sensitive | lineage4 | None | ERR4798431 | HR-TB | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR702404 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR4811030 | Sensitive | None | ERR736865 | HR-TB | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR9786843 | Other | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR987722 | HR-TB | None | ERR9896144 | Other | lineage3 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR990545 | Other | lineage3 | None |
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