Rv2245 - c.954C>T


Drug resistance types
12 Sensitive 2 RR-TB 102 HR-TB 17 MDR-TB 6 Pre-XDR-TB 0 XDR-TB 77 Other
lineage Counts
lineage Count
lineage4.3.4.2.1 1
116
lineage3.1 3
La2 1
lineage4.9 13
lineage4.7 2
lineage4.1.2.1 10
lineage4 10
La1 1
lineage4;lineage3.1 1
lineage4.1.3 2
lineage2.2.1 12
lineage2 3
lineage3 1
lineage4.6.1.1 1
lineage4.3.3 4
lineage1.1.1 1
lineage5.2 2
lineage4.3.2 1
lineage1.1.2 1
lineage4.1.1 3
lineage4.8 3
lineage4.6.2.2 1
lineage6 1
lineage6.3.1 1
lineage2.2.2 2
lineage4.4.1.1 3
lineage4.3.4.1 1
lineage1.2.1.2.1 1
lineage4.5 1
lineage2.1 2
lineage3.1.1 1
lineage2.2 3
lineage6.3;lineage2.2.1 1
lineage4.1 1
lineage4.1.3;lineage4.1.2.1;lineage1.1.2 1
lineage4.8;La3 1
La1.8.1 1
lineage4;lineage1.1 1
lineage1.1 1
spoligotype Counts
spoligotype Count
None 216
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6789625 Sensitive lineage4.3.4.2.1 None
SRR6789626 Other None
ERR5311099 HR-TB None
ERR323034 HR-TB lineage3.1 None
ERR5311090 HR-TB None
ERR502524 HR-TB La2 None
ERR502532 HR-TB None
ERR294248 HR-TB None
SRR7496509 Other None
ERR5311081 HR-TB None
SRR8217918 HR-TB None
SRR7496517 Other None
SRR7585435 Other lineage4.9 None
SRR7496523 Other lineage4.7 None
SRR7535086 Other None
ERR323038 HR-TB None
ERR323055 HR-TB None
ERR323043 HR-TB None
ERR323041 HR-TB None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR323108 HR-TB lineage4 None
ERR323063 HR-TB None
ERR1035157 Other lineage4.9 None
ERR1023525 HR-TB lineage4 None
ERR3283030 HR-TB lineage4.9 None
ERR323115 Sensitive lineage4 None
ERR3283010 Other La1 None
ERR3283017 HR-TB None
ERR3283040 HR-TB None
ERR3283027 HR-TB None
ERR3468544 HR-TB None
ERR3283036 HR-TB None
ERR3797016 HR-TB None
ERR3797015 HR-TB None
ERR3797069 Other None
ERR3797058 Other lineage4.9 None
ERR3797080 HR-TB lineage4.9 None
ERR4407463 HR-TB None
ERR3797083 HR-TB None
ERR3804155 Other lineage4.1.2.1 None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR4188350 HR-TB None
ERR3804169 HR-TB lineage4.1.3 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4810741 HR-TB None
ERR4800341 Other lineage3 None
ERR6358837 HR-TB None
ERR4811142 MDR-TB None
ERR5336148 Other None
ERR6358755 Other lineage4.6.1.1 None
ERR4811022 HR-TB None
ERR4811105 HR-TB None
ERR5866121 MDR-TB lineage4.3.3 None
ERR736867 HR-TB None
ERR6358979 Other None
ERR702404 HR-TB None
ERR736835 HR-TB None
ERR736839 Other None
ERR6866547 Sensitive lineage4 None
ERR702406 HR-TB None
ERR775801 Sensitive lineage1.1.1 None
SRR26936962 MDR-TB lineage2.2.1 None
ERR736874 HR-TB None
ERR9119500 MDR-TB lineage5.2 None
ERR8976043 HR-TB None
ERR9117709 HR-TB None
ERR9117805 Other lineage4.3.2 None
ERR9117721 HR-TB lineage1.1.2 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786617 Other lineage4.1.1 None
ERR9786421 Other lineage4.1.2.1 None
ERR9786569 Other lineage4.8 None
ERR9786604 Other None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
ERR9786642 Other lineage4.1.2.1 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786694 Other lineage4.1.2.1 None
ERR9786682 Other lineage4.1.2.1 None
SRR1169306 Other None
ERR9787165 Other lineage6 None
SRR10808805 Sensitive None
SRR1167384 Other lineage4 None
ERR9787139 Other lineage6.3.1 None
ERR9787197 Other None
SRR069978 Pre-XDR-TB lineage2.2.2 None
SRR069981 HR-TB lineage2.2.2 None
SRR1165584 Other lineage4.1.2.1 None
SRR1169194 Other None
SRR1172844 MDR-TB lineage4.4.1.1 None
SRR1172234 Other None
SRR1172817 HR-TB None
SRR1172728 MDR-TB None
SRR1173166 Other lineage4.9 None
SRR1172857 MDR-TB None
SRR1172951 Other None
SRR1173118 Other None
SRR1173218 Pre-XDR-TB lineage4.3.3 None
SRR1173384 Other lineage4 None
SRR1173363 HR-TB None
SRR1173788 Other None
SRR1173484 Other lineage4 None
SRR1173562 HR-TB lineage4 None
SRR1173633 HR-TB lineage4.9 None
SRR1173629 Other None
SRR1173400 Other None
SRR1173706 Other lineage4.9 None
SRR1173778 Other None
SRR1175074 MDR-TB None
SRR1175049 RR-TB None
SRR1184294 HR-TB None
SRR1184372 MDR-TB None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR1184312 HR-TB lineage2.2.1 None
SRR1184346 HR-TB lineage3.1 None
SRR1184388 Other None
SRR1184381 MDR-TB None
SRR1184380 HR-TB None
SRR1196566 HR-TB None
SRR1196474 HR-TB lineage3.1 None
SRR1196494 MDR-TB None
SRR1196546 HR-TB None
SRR13861566 Other lineage4.9 None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR1196677 HR-TB lineage2 None
SRR12142341 HR-TB None
SRR12416824 HR-TB None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR1196768 MDR-TB None
SRR12006620 Sensitive lineage1.2.1.2.1 None
SRR13837614 Sensitive lineage4.9 None
SRR19303884 HR-TB None
SRR14801749 Sensitive None
SRR15368973 Other None
SRR1640750 HR-TB None
SRR18213713 HR-TB lineage4.5 None
SRR19295647 Sensitive lineage4.9 None
SRR1710057 Other lineage2.1 None
SRR19428522 Sensitive lineage3.1.1 None
SRR19304036 HR-TB None
SRR20969677 HR-TB lineage2 None
SRR26159043 Other lineage4.9 None
SRR20970016 Other lineage2.2 None
SRR20969731 Other lineage2.2.1 None
SRR20969708 HR-TB lineage2.2 None
ERR11081258 Other lineage4.8 None
SRR28119811 Other lineage6.3;lineage2.2.1 None
ERR176793 Other lineage4.1.1 None
ERR4815604 HR-TB None
SRR3675464 HR-TB lineage4.1 None
SRR6325445 HR-TB None
SRR3416776 Other lineage2.1 None
SRR3675482 HR-TB None
SRR3675465 HR-TB None
ERR4814352 HR-TB lineage2.2.1 None
ERR161033 HR-TB None
SRR3675486 HR-TB None
SRR3675236 HR-TB None
SRR3675221 HR-TB None
SRR3675510 Other None
SRR3675311 Other None
SRR3675545 HR-TB None
ERR4816100 Sensitive lineage4.1.3;lineage4.1.2.1;lineage1.1.2 None
ERR4816999 Other None
ERR2027263 Other lineage4 None
SRR3675558 HR-TB None
ERR212001 HR-TB None
ERR4817060 RR-TB None
SRR3675572 Other None
SRR3675574 HR-TB None
ERR502912 Other lineage2.2.1 None
ERR4816585 Other lineage2.2 None
ERR4816656 HR-TB None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR3742665 HR-TB None
SRR4033396 Sensitive lineage2.2.1 None
ERR4817735 Other lineage4.8 None
ERR4817893 Other lineage4.8;La3 None
ERR4818021 Other La1.8.1 None
ERR4817896 HR-TB lineage2.2.1 None
ERR4819322 Other lineage4;lineage1.1 None
ERR234659 HR-TB None
ERR2229143 Other lineage4.1.1 None
ERR4818615 Other None
SRR5007188 Other lineage4 None
ERR4819781 Other lineage2.2.1 None
ERR4820854 Other lineage4.1.2.1 None
ERR1035138 MDR-TB None
SRR6045503 HR-TB None
ERR2693239 HR-TB None
SRR5341302 HR-TB None
ERR4819932 Other lineage4.7 None
SRR5341333 HR-TB None
SRR5341456 Other None
SRR6044855 Other lineage4.9 None
SRR6045526 HR-TB None
SRR6044790 HR-TB None
SRR6046225 HR-TB None
SRR6045952 HR-TB None
SRR6045327 HR-TB None
ERR278594 HR-TB None
SRR6046066 HR-TB None
SRR6325442 HR-TB None
SRR6046540 HR-TB None
SRR6046521 Other lineage4.4.1.1 None
SRR6325444 HR-TB None
SRR6046514 HR-TB None
SRR6458421 MDR-TB lineage2.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6397654 HR-TB lineage4.1.2.1 None
ERR4872094 MDR-TB lineage5.2 None
SRR6325448 HR-TB None
SRR6325447 HR-TB None
ERR3077978 Other lineage1.1 None