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SRA data
Rv0529
- c.-339A>G
Drug resistance types
4 Sensitive
11 RR-TB
77 HR-TB
43 MDR-TB
3 Pre-XDR-TB
1 XDR-TB
107 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
40
M.canetti;lineage2.1;lineage4.9
24
17
lineage2.1;lineage4.9
16
La3;M.canetti;lineage2.1;lineage4.9
12
lineage2.1;lineage4.9;lineage6.3
11
M.canetti;lineage2.1;lineage4.9;lineage6.3
6
lineage4.9;lineage6.3
6
lineage2.2.1
5
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
5
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
246
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR038268
HR-TB
La3;M.canetti;lineage4.8;lineage4.9
None
ERR1023295
MDR-TB
M.canetti;lineage2.1;lineage4.1.2.1
None
ERR1023302
MDR-TB
La3;lineage3
None
ERR1035239
MDR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR124642
MDR-TB
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
None
ERR124651
MDR-TB
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
None
ERR124652
HR-TB
La3;M.canetti;lineage2.1;lineage4.9
None
ERR126600
HR-TB
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
None
ERR126608
HR-TB
La3;M.canetti;lineage2.1;lineage4.9
None
ERR126618
MDR-TB
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
None
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