Rv0001 - c.852G>A


Drug resistance types
44 Sensitive 9 RR-TB 53 HR-TB 28 MDR-TB 1 Pre-XDR-TB 3 XDR-TB 87 Other
lineage Counts
lineage Count
lineage4.3.4.2.1 1
lineage4.9 99
lineage2.1;lineage4.9 4
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.2.1 7
M.canetti;lineage2.1;lineage4.9 2
lineage2.2.1;lineage4 2
lineage4.9;lineage9 2
La3;lineage4.9 5
lineage2.2.1;lineage6.3 1
lineage4.9;lineage6.1.3 1
lineage2.1;lineage4.9;lineage6.3 5
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage1;lineage4.9 2
La1.7.1;La1.7.X-unk4 1
lineage4.5 1
lineage3 2
lineage4.3.2;lineage4.9 1
lineage4.4.1.1 1
La1.7.1;lineage4.9 1
La2;lineage4.9 2
M.canetti;lineage4.9 3
lineage1.1.1 1
La3;lineage2 1
lineage2.1 2
lineage4.2;lineage4.8.1;lineage4.9 2
La1.7;lineage4.2 1
lineage1.1.1;lineage4 1
La1.7;lineage4.9 2
lineage1.1.3.1 1
lineage4.9;lineage6.3 3
5
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;lineage2.1;lineage4.9 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
La1.7.X-unk4;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 2
lineage4.1.2.1 2
lineage4.2.1 1
La1;lineage4.9 2
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage3.1.2.1;lineage3.1.2.2 1
M.canetti;lineage2.2.2;lineage6.2 2
La1.7;M.canetti;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
La2;lineage4.9;lineage9 1
lineage4 1
La3 1
lineage4.2;lineage4.9 3
lineage4.1;lineage4.9 2
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.6.3;lineage4.9;lineage6.3 1
lineage5.1.4 1
lineage3.1;lineage9 1
M.canetti;lineage2.2 2
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La1.2 1
La3;M.canetti;lineage2.2.1 1
La2;lineage2.2 1
lineage2.2.2 1
lineage4.1.2 1
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1.6;La3;lineage4.9 1
La1.7;lineage3.1;lineage4 1
lineage3.1 1
lineage3.1.2.2 1
lineage2.1;lineage4.3.2;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage4.3.4.1 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4.1.1.3;lineage4.9 2
La1.6;lineage4 1
La3;lineage2.1;lineage6.3 1
lineage4.2.1.1;lineage4.3.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
spoligotype Counts
spoligotype Count
None 225
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR1175496 Sensitive lineage4.9 None
ERR369157 Sensitive lineage4.9 None
ERR363499 Other lineage4.9 None
ERR369151 Other lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR4818929 HR-TB lineage4.9 None
ERR363474 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
SRR3675473 Sensitive lineage4.9 None
ERR369163 Other lineage4.9 None
ERR9119669 MDR-TB lineage4.9 None
SRR1184312 Other lineage2.2.1 None
ERR369161 Sensitive lineage4.9 None
SRR15368973 Other lineage4.9 None
SRR6045526 Other lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR349265 Other lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR400345 Other lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR4811031 Other lineage4.5 None
ERR4811030 Other lineage4.9 None
SRR3675248 Other lineage4.9 None
ERR349299 Other lineage4.9 None
SRR6511621 HR-TB lineage4.9 None
ERR349264 Other lineage4.9 None
ERR2514552 Sensitive lineage3 None
SRR6045371 Other lineage4.9 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR4819877 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR323039 MDR-TB La2;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
SRR14066533 RR-TB lineage1.1.1 None
ERR363453 Other lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
ERR363447 Other lineage4.9 None
SRR3675247 Other lineage4.9 None
SRR1196546 Other lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR373947 Other lineage4.9 None
SRR3416776 Other lineage2.1 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR23961559 Other La1.7;lineage4.2 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR349266 Other lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR1184381 MDR-TB None
ERR212001 HR-TB None
ERR369162 Other lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
ERR779852 HR-TB lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR363421 Other lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4798504 RR-TB lineage3 None
ERR4820773 HR-TB lineage4.9 None
ERR4821686 Sensitive lineage4.1.2.1 None
ERR4816466 HR-TB lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
SRR1172310 MDR-TB lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
SRR6046245 Other lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
ERR2512770 Sensitive lineage4.2.1 None
SRR23961542 Other La1;lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR5341345 Sensitive lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR373946 Other lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR4769521 RR-TB lineage4.9 None
ERR363426 Sensitive lineage4.9 None
SRR6046897 Sensitive lineage4.9 None
SRR3675548 Sensitive lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR3675580 Sensitive lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR4815441 HR-TB lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR6045706 Other lineage4.9 None
SRR1184294 Other lineage4.9 None
SRR12708384 Sensitive lineage4.9 None
ERR4816478 HR-TB lineage4 None
SRR3675387 Other lineage4.9 None
SRR1172728 RR-TB La3 None
SRR5341296 Sensitive lineage4.9 None
SRR10809074 HR-TB lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR363502 Other lineage4.9 None
ERR363509 Sensitive lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR473332 Other lineage4.9 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
SRR10808730 Other lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
ERR4798431 Other lineage4.1;lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR363500 Other lineage4.9 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
ERR4819241 Other lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
ERR2513283 Sensitive lineage5.1.4 None
SRR6045503 Other lineage4.9 None
SRR5341456 Other lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR987722 MDR-TB None
SRR28119805 Other lineage4.9 None
SRR12708416 Sensitive None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR349300 Other lineage4.9 None
ERR6866807 RR-TB lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR363449 Other lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR23961549 Other La1.2 None
SRR6045010 Sensitive lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR369158 Other lineage4.9 None
ERR212033 Other lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR18910194 HR-TB lineage2.2.2 None
SRR18003019 Other lineage2.2.1 None
SRR9970980 HR-TB lineage4.1.2 None
SRR1167384 Other La3;lineage4.9 None
ERR363506 Sensitive lineage4.9 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR3675312 Sensitive lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR1184346 HR-TB lineage3.1 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR1175508 Sensitive lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR400336 Sensitive lineage4.9 None
ERR400326 Other lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
ERR363498 Other lineage4.9 None
SRR3675522 Other lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR176751 HR-TB lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
ERR363490 Other lineage4.9 None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR12416842 HR-TB lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR4797313 Sensitive lineage2.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4819422 HR-TB lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR4818953 Sensitive lineage4.1.2.1 gb
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR161037 HR-TB lineage4.9 None
ERR369159 Other lineage4.9 None
ERR363446 Other lineage4.9 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR11252612 Other La3;lineage4.9 None
ERR234659 HR-TB None
SRR28351554 Other La1.6;lineage4 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR9971114 Other lineage2.2.1 None
ERR373945 Other lineage4.9 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None