Rv0668 - c.2640G>C
Drug resistance types
93 Sensitive
14 RR-TB
103 HR-TB
10 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
56 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 62 |
| lineage4.1.2.1 | 11 |
| 68 | |
| lineage3 | 5 |
| lineage4.9 | 46 |
| lineage1.1 | 28 |
| lineage4.5 | 3 |
| lineage2.2.1 | 12 |
| lineage2.2 | 5 |
| lineage4.3.3 | 4 |
| lineage4.3.2 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4.8;lineage4.1 | 2 |
| lineage2 | 1 |
| lineage2.2.1.2 | 2 |
| lineage4.4.1.1 | 1 |
| lineage2.2.1.1 | 2 |
| lineage1.2.1.2 | 1 |
| lineage4.3.4.1 | 1 |
| La1.7.1 | 1 |
| La1.8.1 | 3 |
| lineage4.8 | 4 |
| lineage4.1 | 2 |
| lineage4.1.1.3 | 2 |
| lineage3;lineage2.1 | 1 |
| lineage4.1.1 | 2 |
| lineage2.1 | 1 |
| lineage5.1.4 | 1 |
| lineage4;lineage1.1.2 | 1 |
| lineage4.1.1.3.1 | 2 |
| lineage1.1.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.2.1 | 1 |
| lineage3.1 | 2 |
| lineage4.7 | 1 |
| lineage4.3.4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 284 |
Geographic prevalence
Country level data for this variant is available for 27 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4178226 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4188350 | HR-TB | None | ERR4797184 | Sensitive | lineage4 | None | ERR4596902 | HR-TB | lineage3 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4407532 | Sensitive | lineage1.1 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4797313 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4798431 | HR-TB | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4811030 | Sensitive | None | ERR4812155 | Sensitive | None | ERR702404 | HR-TB | None | ERR5908228 | Other | lineage4.3.3 | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR6358837 | HR-TB | None | ERR6358991 | HR-TB | None | ERR6865502 | Sensitive | lineage4 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR718374 | Sensitive | lineage1.1 | th | ERR718262 | Sensitive | lineage1.1 | th | ERR718236 | Sensitive | lineage1.1 | th | ERR718235 | Sensitive | lineage1.1 | th | ERR718288 | HR-TB | lineage1.1 | th | ERR718497 | Sensitive | lineage1.1 | th | ERR718422 | Sensitive | lineage1.1 | th | ERR736834 | Sensitive | lineage4 | None | ERR718556 | Sensitive | lineage1.1 | th | ERR736831 | HR-TB | lineage4.9 | None | ERR736837 | Other | lineage4.9 | None | ERR751915 | HR-TB | lineage1.1 | th | ERR751765 | Sensitive | lineage1.1 | th | ERR751875 | Sensitive | lineage1.1 | th | ERR736835 | HR-TB | None | ERR751946 | Sensitive | lineage1.1 | th | ERR751929 | Sensitive | lineage1.1 | th | ERR768001 | Sensitive | lineage1.1 | th | ERR751956 | HR-TB | lineage1.1 | th | ERR752075 | Sensitive | lineage1.1 | th | ERR752159 | Sensitive | lineage1.1 | th | ERR752189 | Other | lineage1.1 | th | ERR752229 | Other | lineage4.5 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR768038 | Sensitive | lineage1.1 | th | ERR775779 | HR-TB | lineage1.1 | th | ERR775770 | Sensitive | lineage1.1 | th | ERR9119669 | HR-TB | None | ERR775792 | Sensitive | lineage1.1 | th | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR775800 | Sensitive | lineage1.1 | th | ERR7821163 | Other | lineage2.2.1 | None | ERR8976043 | HR-TB | None | ERR9119096 | Other | lineage4.3.3 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR069989 | HR-TB | lineage2 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1165423 | Other | lineage4.1.2.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1173453 | Other | lineage4.4.1.1 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9786843 | Other | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR12199472 | Sensitive | lineage1.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR13423544 | Other | lineage4.5 | None | SRR13837530 | Sensitive | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR13861305 | Other | lineage4.9 | None | SRR13861424 | RR-TB | lineage4.9 | None | SRR13861439 | RR-TB | lineage4.9 | None | SRR13861556 | Other | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR1791696 | Other | La1.8.1 | None | SRR13837631 | Sensitive | lineage4.9 | None | SRR13861528 | HR-TB | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR20632814 | Sensitive | lineage4 | None | SRR3675455 | Sensitive | lineage4 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR1035239 | HR-TB | None | SRR3675477 | Other | lineage4.9 | None | SRR6325445 | HR-TB | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675482 | HR-TB | None | SRR3675488 | HR-TB | None | ERR4814639 | HR-TB | lineage4 | None | SRR3675229 | Other | lineage4 | None | SRR3675501 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675486 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675222 | Other | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR3675279 | Other | None | SRR3675387 | Sensitive | None | SRR3675383 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675522 | Other | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | ERR4816151 | Other | lineage4.8 | None | SRR3675545 | HR-TB | None | SRR5341422 | HR-TB | lineage2.1 | None | SRR3675558 | HR-TB | None | ERR4817069 | RR-TB | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR212138 | HR-TB | lineage4 | None | ERR2229233 | Sensitive | lineage4 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR2229143 | Other | lineage4.1.1 | None | ERR2513283 | Other | lineage5.1.4 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR212121 | HR-TB | None | ERR2229234 | RR-TB | lineage4.8 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR2509886 | RR-TB | lineage3 | None | ERR4818561 | HR-TB | lineage4 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR5341315 | Sensitive | None | ERR4819546 | HR-TB | lineage3 | None | SRR5341432 | HR-TB | lineage4 | None | ERR1035138 | MDR-TB | None | SAMN02414850 | Other | lineage4.1.2.1 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | SRR5341313 | HR-TB | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR4820833 | HR-TB | None | ERR6359082 | Other | lineage4.9 | None | SRR6045503 | HR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821053 | Other | lineage3 | None | ERR2693239 | HR-TB | None | ERR278594 | HR-TB | None | SRR5535933 | HR-TB | None | SRR6045519 | HR-TB | None | SRR5709792 | Pre-XDR-TB | lineage1.1 | th | SRR5709857 | Sensitive | lineage1.1 | th | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6045217 | Other | lineage4 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6325448 | HR-TB | None | SRR6046245 | Other | lineage4.9 | None | SRR6325444 | HR-TB | None | ERR2446563 | Other | lineage2.2.1 | nl | ERR4830353 | Other | None | SRR6046514 | HR-TB | None | ERR3275196 | Other | lineage2.2.1 | nl | SRR6046802 | Other | lineage4 | None | SRR6325447 | HR-TB | None | SRR6046897 | Sensitive | lineage4 | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR323037 | HR-TB | lineage4 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR4831638 | Sensitive | None | ERR294248 | HR-TB | None | ERR5311099 | HR-TB | None | ERR323036 | HR-TB | None | ERR502943 | HR-TB | None | ERR5311090 | HR-TB | None | ERR5311081 | HR-TB | None | SRR8217918 | HR-TB | None | ERR323041 | HR-TB | None | ERR323038 | HR-TB | None | SRR7645928 | RR-TB | lineage4.7 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323055 | HR-TB | None | ERR323063 | HR-TB | None | ERR3283017 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR067712 | HR-TB | lineage4 | None | ERR1063855 | Other | lineage4 | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3283025 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3283055 | HR-TB | None | ERR349298 | Sensitive | lineage4 | None | ERR3445502 | HR-TB | lineage4 | None | ERR3468544 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349299 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369163 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR373947 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR3797016 | HR-TB | None | ERR3797060 | Other | La1.8.1 | None | ERR3797046 | HR-TB | None | ERR3797081 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR3797083 | HR-TB | None | ERR400320 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR400336 | Sensitive | lineage4 | None |
|---|
