Rv0668 - c.2640G>C


Drug resistance types
58 Sensitive 21 RR-TB 83 HR-TB 51 MDR-TB 5 Pre-XDR-TB 2 XDR-TB 66 Other
lineage Counts
lineage Count
lineage4.9 62
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage4.3.4.1 3
M.canetti;lineage2.1;lineage4.9 24
lineage2.1;lineage4.9 6
lineage1.1 31
M.canetti;lineage4.9 3
lineage2.2.1 8
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage2.2 2
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage2.2.1.1 2
La3;M.canetti;lineage3.1 1
2
La3;M.canetti;lineage2.1;lineage4.9 12
lineage4.9;lineage7 1
lineage4.1;lineage4.8 2
lineage4.1.1.3;lineage4.9 2
M.canetti;lineage2.2 3
La1.8.1 2
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
lineage4 3
lineage4.1;lineage4.9 1
La1.7;lineage4.9 7
lineage4.5 3
lineage4.8 4
M.canetti;lineage2.1;lineage4 1
M.canetti;lineage2.2.2;lineage6.2 2
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage3 3
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.1.1.3 4
lineage4.1.1.1 1
lineage4.6.2.2 2
lineage4.1.2.1 10
M.canetti;lineage4.3.1;lineage4.9 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage4.3.3 4
M.canetti;lineage2.1;lineage6.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.4.1.1.1 1
lineage2.1;lineage4.9;lineage6.3 2
lineage1.1.3.2 1
lineage2.1;lineage2.2;lineage6.3 1
La1.7;lineage4.9;lineage7 1
M.canetti;lineage2.1;lineage3 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
lineage4.8.1 3
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
La3;M.canetti;lineage4.8;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
La1.7 2
lineage2.2.1.2 1
La3;M.canetti;lineage2.1;lineage3.1 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La1.7.1 2
lineage4.2.2.2 1
La1.2;La1.8.1 1
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
M.canetti;lineage2.1 1
lineage5.1.4 1
La1.7;M.canetti;lineage4.9 3
lineage1.2.1.2 1
lineage4.4.1.1 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage3.1.2.1;lineage4 1
lineage1;lineage4.9 1
lineage4.3.4.2.1 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La3;M.canetti;lineage4.9 2
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
M.canetti;lineage4.9;lineage9 1
lineage2.1;lineage4.3.2 1
lineage1.1.2 1
lineage1.1.2;lineage4 1
M.canetti;lineage1 1
lineage4.9;lineage9 1
lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 286
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR8217918 HR-TB lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4812155 Other lineage4.9 None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR3675229 Sensitive lineage4.9 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
ERR718497 Sensitive lineage1.1 th
SRR3675449 Other M.canetti;lineage4.9 None
SRR1180172 Other lineage2.2.1 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR176751 Other lineage4.9 None
ERR11465352 Sensitive lineage4.3.4.1 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR775779 HR-TB lineage1.1 th
SRR13861305 Other lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR6359082 Other lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR752075 Sensitive lineage1.1 th
SRR3675383 Sensitive lineage4.9 None
ERR9786843 Other None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR6045217 Sensitive lineage4.9 None
ERR3275196 Other lineage2.2.1 nl
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797023 HR-TB La1.8.1 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4798823 HR-TB lineage4 None
SRR6045359 Sensitive lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
ERR978765 RR-TB lineage4.8 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR752159 Sensitive lineage1.1 th
ERR369151 Other lineage4.9 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR473323 HR-TB lineage4.9 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR4821053 RR-TB lineage3 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR768001 Sensitive lineage1.1 th
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR2693228 RR-TB lineage4.9 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR718236 Sensitive lineage1.1 th
ERR718556 Sensitive lineage1.1 th
SRR3675455 Sensitive lineage4.9 None
ERR4799547 HR-TB lineage2.2.1 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR718235 Sensitive lineage1.1 th
SRR3675267 Other La1.7;lineage4.9 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR1063855 Other lineage4.9 None
SRR11342651 MDR-TB lineage4.1.1.1 None
ERR400345 Other lineage4.9 None
ERR3468544 Other lineage2.1;lineage4.9 None
ERR6865502 Sensitive lineage4 None
SRR11662694 Other lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4178226 Sensitive lineage4 None
ERR4797184 Sensitive lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR718288 HR-TB lineage1.1 th
ERR5917710 Other lineage4.1.2.1 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR11342636 MDR-TB lineage4.3.3 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR6045371 Other lineage4.9 None
ERR775800 Sensitive lineage1.1 th
SRR12199472 Sensitive lineage1.1 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4596902 MDR-TB lineage3 None
ERR4596910 Sensitive lineage4.9 None
ERR775792 Sensitive lineage1.1 th
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR751956 HR-TB lineage1.1 th
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR3675441 Other lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
ERR718262 Sensitive lineage1.1 th
ERR775770 Sensitive lineage1.1 th
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR28868888 Other lineage1.1.3.2 None
SRR3675494 RR-TB lineage4.9 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SAMN02414850 Other lineage4.1.2.1 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
ERR5908228 RR-TB lineage4.3.3 None
SRR26331611 Sensitive lineage4.9 None
SRR1180147 Other lineage2.2.1.1 None
SRR1183144 Other lineage2.2.1 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4816151 Sensitive lineage4.8 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
SRR11662690 HR-TB lineage4.9 None
ERR736831 Other lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR5709792 Pre-XDR-TB lineage1.1 th
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4797313 Sensitive lineage2.2.1 None
SRR1162864 Other lineage4.1.2.1 None
SRR6044815 Other lineage4.9 None
ERR751946 Sensitive lineage1.1 th
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR11342693 MDR-TB lineage4.8.1 None
SRR3675243 Other lineage4.9 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR29096203 Sensitive lineage4.9 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR29440660 Sensitive lineage1.1 None
SRR6045832 Other lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR718374 Sensitive lineage1.1 th
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR4407532 Sensitive lineage1.1 None
ERR4769444 HR-TB lineage4.9 None
ERR752229 Other lineage4.5 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675222 Other La1.7 None
ERR751929 Sensitive lineage1.1 th
SRR1175127 Other lineage2.2.1.2 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
ERR751765 Sensitive lineage1.1 th
ERR751915 HR-TB lineage1.1 th
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR5162090 RR-TB lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR3675501 Other La1.7;lineage4.9 None
ERR3797083 RR-TB lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
ERR4178309 Other lineage4.1.2.1 None
ERR11465604 HR-TB lineage4.8.1 None
SRR11342687 RR-TB lineage4.2.2.2 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4830353 Other La1.7 None
ERR4799025 Other lineage4.8 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR7240033 Other La1.2;La1.8.1 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR11342660 MDR-TB lineage2.2.1 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR5709857 Sensitive lineage1.1 th
ERR6865513 Other lineage4.1.2.1 None
ERR400326 Other lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR2229143 RR-TB lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
SRR22251676 Sensitive lineage1.1 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR11466044 Other lineage4.1.1.3 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR768038 Sensitive lineage1.1 th
ERR323037 Other lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
ERR11465353 Sensitive lineage4.3.4.1 None
SRR6045706 Sensitive lineage4.9 None
SRR11342647 MDR-TB lineage4.1.1.3 None
SRR1165423 RR-TB lineage4.1.2.1 None
SRR29050859 Other lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR736834 Sensitive lineage4.9 None
ERR369157 Sensitive lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR2513283 Sensitive lineage5.1.4 None
SRR1165584 Other lineage4.1.2.1 None
ERR9119096 RR-TB lineage4.3.3 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR4769442 Sensitive lineage4.9 None
SRR29440609 Sensitive lineage1.1 None
SRR3675487 Other M.canetti;lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR7240492 HR-TB La1.7.1 None
SRR1173453 Other lineage4.4.1.1 None
SRR1640750 Other None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6045503 Sensitive lineage4.9 None
SRR6046141 Other lineage4.9 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR28351455 Other lineage3.1.2.1;lineage4 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR11342662 MDR-TB lineage4.8.1 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3468607 Other lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
SRR1165506 Other lineage4.1.2.1 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675507 Other lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR3675522 Other lineage4.9 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR718422 Sensitive lineage1.1 th
ERR751875 Sensitive lineage1.1 th
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4817667 HR-TB lineage4.8 None
SRR3675492 Other La1.7;lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR6045548 Sensitive lineage4.9 None
SRR3675269 RR-TB lineage4.9 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR14782054 Other lineage4.9 None
SRR21733183 RR-TB lineage1.1.2 None
SRR6046897 Sensitive lineage4.9 None
ERR4817692 HR-TB lineage1.1.2;lineage4 None
SRR29096276 Sensitive lineage4.9 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR752189 Other lineage1.1 th
SRR15014655 Other M.canetti;lineage1 None
ERR6359074 HR-TB lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR1791696 Other La1.8.1 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR400336 Sensitive lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
SRR13423544 Other lineage4.5 None