Rv0668 - c.2640G>C


Drug resistance types
93 Sensitive 14 RR-TB 103 HR-TB 10 MDR-TB 8 Pre-XDR-TB 0 XDR-TB 56 Other
lineage Counts
lineage Count
lineage4 62
lineage4.1.2.1 11
68
lineage3 5
lineage4.9 46
lineage1.1 28
lineage4.5 3
lineage2.2.1 12
lineage2.2 5
lineage4.3.3 4
lineage4.3.2 1
lineage4.6.2.2 2
lineage4.8;lineage4.1 2
lineage2 1
lineage2.2.1.2 2
lineage4.4.1.1 1
lineage2.2.1.1 2
lineage1.2.1.2 1
lineage4.3.4.1 1
La1.7.1 1
La1.8.1 3
lineage4.8 4
lineage4.1 2
lineage4.1.1.3 2
lineage3;lineage2.1 1
lineage4.1.1 2
lineage2.1 1
lineage5.1.4 1
lineage4;lineage1.1.2 1
lineage4.1.1.3.1 2
lineage1.1.1 1
lineage1.1.3.1 1
lineage4.2.1 1
lineage3.1 2
lineage4.7 1
lineage4.3.4.2.1 1
spoligotype Counts
spoligotype Count
None 284
Geographic prevalence
Country level data for this variant is available for 27 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4178226 Sensitive lineage4 None
ERR4178309 Other lineage4.1.2.1 None
ERR4188350 HR-TB None
ERR4797184 Sensitive lineage4 None
ERR4596902 HR-TB lineage3 None
ERR4596910 Sensitive lineage4 None
ERR4769442 HR-TB lineage4 None
ERR4769444 HR-TB lineage4.9 None
ERR4407532 Sensitive lineage1.1 None
ERR473323 HR-TB lineage4.9 None
ERR4769433 Pre-XDR-TB lineage4.9 None
ERR4769474 HR-TB lineage4 None
ERR4797313 HR-TB None
ERR4797350 Sensitive lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR4798431 HR-TB None
ERR4811031 Sensitive lineage4.5 None
ERR4799547 Sensitive lineage2.2.1 None
ERR4799025 Pre-XDR-TB None
ERR4799513 HR-TB lineage2.2 None
ERR4811030 Sensitive None
ERR4812155 Sensitive None
ERR702404 HR-TB None
ERR5908228 Other lineage4.3.3 None
ERR5917710 Other lineage4.1.2.1 None
ERR6358837 HR-TB None
ERR6358991 HR-TB None
ERR6865502 Sensitive lineage4 None
ERR6358951 HR-TB lineage4 None
ERR6359066 HR-TB lineage4 None
ERR6359074 HR-TB lineage4.9 None
ERR6865513 Other lineage4.1.2.1 None
ERR718374 Sensitive lineage1.1 th
ERR718262 Sensitive lineage1.1 th
ERR718236 Sensitive lineage1.1 th
ERR718235 Sensitive lineage1.1 th
ERR718288 HR-TB lineage1.1 th
ERR718497 Sensitive lineage1.1 th
ERR718422 Sensitive lineage1.1 th
ERR736834 Sensitive lineage4 None
ERR718556 Sensitive lineage1.1 th
ERR736831 HR-TB lineage4.9 None
ERR736837 Other lineage4.9 None
ERR751915 HR-TB lineage1.1 th
ERR751765 Sensitive lineage1.1 th
ERR751875 Sensitive lineage1.1 th
ERR736835 HR-TB None
ERR751946 Sensitive lineage1.1 th
ERR751929 Sensitive lineage1.1 th
ERR768001 Sensitive lineage1.1 th
ERR751956 HR-TB lineage1.1 th
ERR752075 Sensitive lineage1.1 th
ERR752159 Sensitive lineage1.1 th
ERR752189 Other lineage1.1 th
ERR752229 Other lineage4.5 None
ERR772255 MDR-TB lineage4.3.2 None
ERR768038 Sensitive lineage1.1 th
ERR775779 HR-TB lineage1.1 th
ERR775770 Sensitive lineage1.1 th
ERR9119669 HR-TB None
ERR775792 Sensitive lineage1.1 th
ERR7911670 Pre-XDR-TB lineage2.2 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR775800 Sensitive lineage1.1 th
ERR7821163 Other lineage2.2.1 None
ERR8976043 HR-TB None
ERR9119096 Other lineage4.3.3 None
ERR9786525 Other lineage4.8;lineage4.1 None
SRR1175487 Sensitive lineage4.9 None
SRR069989 HR-TB lineage2 None
SRR1158918 Sensitive lineage4 None
SRR1162864 HR-TB lineage4.1.2.1 None
SRR1165423 Other lineage4.1.2.1 None
SRR1165584 Other lineage4.1.2.1 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1173453 Other lineage4.4.1.1 None
ERR9786526 Other lineage4.8;lineage4.1 None
ERR9786843 Other None
SRR1165506 Other lineage4.1.2.1 None
SRR1166821 HR-TB lineage4.1.2.1 None
SRR1175127 Sensitive lineage2.2.1.2 None
SRR1175508 Other lineage4.9 None
SRR1175500 MDR-TB lineage4 None
SRR1175507 MDR-TB lineage4 None
SRR1180147 Other lineage2.2.1.1 None
SRR1180137 Other lineage2.2.1 None
SRR1180172 Other lineage2.2.1 None
SRR1181325 Sensitive lineage4.9 None
SRR1180996 HR-TB lineage4 None
SRR1181020 Other lineage2.2.1 None
SRR1181289 Other lineage2.2.1 None
SRR1183049 Other lineage2.2 None
SRR12199472 Sensitive lineage1.1 None
SRR1183106 Other lineage2.2.1.1 None
SRR1183144 Other lineage2.2.1 None
SRR1183965 Sensitive lineage4.9 None
SRR12006550 Other lineage1.2.1.2 None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR13423544 Other lineage4.5 None
SRR13837530 Sensitive lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
SRR13861305 Other lineage4.9 None
SRR13861424 RR-TB lineage4.9 None
SRR13861439 RR-TB lineage4.9 None
SRR13861556 Other lineage4.9 None
SRR14782405 HR-TB None
SRR16156188 HR-TB lineage4.9 None
SRR1791696 Other La1.8.1 None
SRR13837631 Sensitive lineage4.9 None
SRR13861528 HR-TB lineage4.9 None
SRR1640750 HR-TB None
SRR1735596 RR-TB lineage4.9 None
SRR3675473 Sensitive lineage4.9 None
SRR20632814 Sensitive lineage4 None
SRR3675455 Sensitive lineage4 None
SRR19303820 RR-TB lineage4.8 None
SRR12708416 Sensitive lineage4.1 None
SRR3675464 HR-TB lineage4.1 None
ERR1035239 HR-TB None
SRR3675477 Other lineage4.9 None
SRR6325445 HR-TB None
ERR550636 MDR-TB lineage4.1.1.3 None
SRR3675247 Other lineage4.9 None
SRR3675482 HR-TB None
SRR3675488 HR-TB None
ERR4814639 HR-TB lineage4 None
SRR3675229 Other lineage4 None
SRR3675501 HR-TB None
ERR161033 HR-TB None
SRR3675486 HR-TB None
ERR4814536 MDR-TB lineage3;lineage2.1 None
SRR3675209 Sensitive lineage4.9 None
SRR3675222 Other None
SRR3675292 Sensitive lineage4 None
SRR3675266 Sensitive lineage4.9 None
SRR3675265 Other lineage4 None
SRR3675279 Other None
SRR3675387 Sensitive None
SRR3675383 HR-TB None
ERR176751 HR-TB None
SRR3675522 Other None
SRR3675541 Sensitive lineage4.9 None
SRR3675547 Other lineage4.9 None
ERR4816113 Sensitive lineage4.1.1 None
ERR4816151 Other lineage4.8 None
SRR3675545 HR-TB None
SRR5341422 HR-TB lineage2.1 None
SRR3675558 HR-TB None
ERR4817069 RR-TB None
SRR5153091 HR-TB lineage4.3.3 None
ERR212138 HR-TB lineage4 None
ERR2229233 Sensitive lineage4 None
ERR4815815 Sensitive lineage4 None
ERR4817667 HR-TB lineage4.8 None
ERR2229143 Other lineage4.1.1 None
ERR2513283 Other lineage5.1.4 None
SRR3675577 Sensitive lineage4.9 None
ERR212121 HR-TB None
ERR2229234 RR-TB lineage4.8 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR4817692 HR-TB lineage4;lineage1.1.2 None
ERR4817915 RR-TB lineage4.9 None
ERR2509886 RR-TB lineage3 None
ERR4818561 HR-TB lineage4 None
SRR5007161 RR-TB lineage4.1.1.3.1 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
ERR4819314 Other lineage1.1.1 None
SRR5341315 Sensitive None
ERR4819546 HR-TB lineage3 None
SRR5341432 HR-TB lineage4 None
ERR1035138 MDR-TB None
SAMN02414850 Other lineage4.1.2.1 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR4819864 RR-TB lineage1.1.3.1 None
SRR5341313 HR-TB None
SRR5341345 Sensitive lineage4.9 None
ERR4820833 HR-TB None
ERR6359082 Other lineage4.9 None
SRR6045503 HR-TB None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR4821053 Other lineage3 None
ERR2693239 HR-TB None
ERR278594 HR-TB None
SRR5535933 HR-TB None
SRR6045519 HR-TB None
SRR5709792 Pre-XDR-TB lineage1.1 th
SRR5709857 Sensitive lineage1.1 th
ERR4822261 RR-TB lineage2.2.1 None
ERR4821704 MDR-TB lineage4.3.3 None
SRR6045832 HR-TB lineage4.9 None
SRR6046141 Other lineage4.9 None
SRR6045706 Sensitive lineage4 None
SRR6044819 Sensitive lineage4.9 None
SRR6044952 RR-TB lineage4.9 None
SRR6045952 HR-TB None
SRR6325442 HR-TB None
SRR6045217 Other lineage4 None
SRR6045359 Sensitive lineage4.9 None
SRR6045371 Sensitive lineage4.2.1 None
SRR6325448 HR-TB None
SRR6046245 Other lineage4.9 None
SRR6325444 HR-TB None
ERR2446563 Other lineage2.2.1 nl
ERR4830353 Other None
SRR6046514 HR-TB None
ERR3275196 Other lineage2.2.1 nl
SRR6046802 Other lineage4 None
SRR6325447 HR-TB None
SRR6046897 Sensitive lineage4 None
ERR4831546 HR-TB lineage2.2 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR3077978 Other lineage1.1 None
ERR323037 HR-TB lineage4 None
ERR485006 HR-TB lineage4.9 None
SRR6397654 HR-TB lineage4.1.2.1 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR4831545 Pre-XDR-TB lineage2.2 None
ERR323034 HR-TB lineage3.1 None
ERR4831638 Sensitive None
ERR294248 HR-TB None
ERR5311099 HR-TB None
ERR323036 HR-TB None
ERR502943 HR-TB None
ERR5311090 HR-TB None
ERR5311081 HR-TB None
SRR8217918 HR-TB None
ERR323041 HR-TB None
ERR323038 HR-TB None
SRR7645928 RR-TB lineage4.7 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR323054 HR-TB lineage3.1 None
ERR323055 HR-TB None
ERR323063 HR-TB None
ERR3283017 HR-TB None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR067712 HR-TB lineage4 None
ERR1063855 Other lineage4 None
ERR3283048 HR-TB lineage4.9 None
ERR3283025 HR-TB None
ERR3445501 HR-TB None
ERR3283055 HR-TB None
ERR349298 Sensitive lineage4 None
ERR3445502 HR-TB lineage4 None
ERR3468544 HR-TB None
ERR349264 Sensitive lineage4 None
ERR349265 Sensitive lineage4 None
ERR349266 Sensitive lineage4.9 None
ERR349299 Sensitive lineage4 None
ERR363446 Sensitive lineage4 None
ERR349300 Sensitive lineage4.9 None
ERR363421 Sensitive lineage4 None
ERR363426 Sensitive lineage4 None
ERR363437 Sensitive lineage4 None
ERR363449 Sensitive lineage4 None
ERR363453 Sensitive lineage4 None
ERR363456 Sensitive lineage4 None
ERR363499 Sensitive lineage4 None
ERR363474 Sensitive lineage4 None
ERR363479 Sensitive lineage4 None
ERR363506 Sensitive lineage4 None
ERR363498 Sensitive lineage4 None
ERR363500 Sensitive lineage4 None
ERR363490 Sensitive lineage4 None
ERR369156 Sensitive lineage4.9 None
ERR363509 Sensitive lineage4 None
ERR369151 Sensitive lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR369157 Sensitive lineage4.9 None
ERR369163 Sensitive lineage4 None
ERR369162 Sensitive lineage4 None
ERR3797023 HR-TB La1.8.1 None
ERR373947 Sensitive lineage4 None
ERR373945 HR-TB lineage4 None
ERR373946 Sensitive lineage4 None
ERR3797016 HR-TB None
ERR3797060 Other La1.8.1 None
ERR3797046 HR-TB None
ERR3797081 Sensitive lineage4 None
ERR400326 Sensitive lineage4 None
ERR3797083 HR-TB None
ERR400320 Sensitive lineage4 None
ERR400345 Other lineage4 None
ERR400336 Sensitive lineage4 None