Rv0407 - c.744T>C


Drug resistance types
113 Sensitive 2 RR-TB 219 HR-TB 12 MDR-TB 11 Pre-XDR-TB 0 XDR-TB 117 Other
lineage Counts
lineage Count
lineage2.2.1 23
lineage4.9 59
lineage4 91
lineage3 12
214
lineage4.6.2.2 1
lineage4.7 2
La1.8.1 5
lineage4.9;lineage2.1 1
lineage4.1.2.1 9
lineage2.2 10
lineage1.1 1
lineage3.1 2
lineage4.2.1.1 1
lineage4.4.1.2 1
lineage4.3.4.2.1 1
La1 2
lineage4.1.3 2
La1.2 1
lineage2 4
lineage4.3.4 2
lineage4.1.2.1.1 1
lineage4.3.2 1
lineage1.1.3.1 1
lineage1.1.2 1
La3 1
lineage2.2.1.2 1
lineage4.4.1.1 2
lineage4.3.3 2
lineage2.2.1.1 2
lineage4.9;lineage2.2 1
lineage4.4.1.1.1 1
lineage4.3.4.1 1
lineage4.5 1
lineage7;lineage2.2.1.2 1
lineage9;lineage3.1 1
lineage4.1 2
lineage4.1.1 1
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage3;lineage2.1 1
lineage2.1 2
lineage4.3 1
lineage4.1.1.3 1
lineage4;lineage1.1.2 1
lineage1.2.2.2 1
lineage4.1.1.2 1
spoligotype Counts
spoligotype Count
None 474
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR2509673 Other lineage2.2.1 None
ERR4818536 Other lineage4.9 None
SRR5007188 Other lineage4 None
SRR5341400 HR-TB lineage4 None
SRR5341373 HR-TB lineage4 None
SRR2100639 Sensitive lineage3 None
SRR5341456 Other None
SRR5341412 Pre-XDR-TB lineage3 None
ERR4819462 Other lineage4 None
SRR5341418 Other None
SRR5341432 HR-TB lineage4 None
ERR1035138 MDR-TB None
SRR5341293 HR-TB lineage4 None
ERR4820785 Other lineage3 None
ERR4819781 Other lineage2.2.1 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR5341313 HR-TB None
ERR2514692 Other None
SRR2101012 Sensitive lineage3 None
SRR5341302 HR-TB None
SRR5341333 HR-TB None
ERR4819933 Other lineage4.9 None
SRR5341315 Sensitive None
ERR4819932 Other lineage4.7 None
SRR6045555 HR-TB None
ERR2693231 Other None
SRR5431730 Other La1.8.1 None
ERR4821053 Other lineage3 None
ERR2693239 HR-TB None
ERR502511 Sensitive lineage4.9;lineage2.1 None
ERR2693230 Other None
ERR2693254 Other None
ERR2693257 Other None
SRR6045503 HR-TB None
SRR6045526 HR-TB None
SRR5535933 HR-TB None
SRR6045519 HR-TB None
ERR2660539 Other lineage4.9 None
ERR4821655 Sensitive lineage4 None
ERR6359082 Other lineage4.9 None
SRR5341330 HR-TB None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR4820854 Other lineage4.1.2.1 None
ERR2446563 Other lineage2.2.1 nl
ERR278594 HR-TB None
ERR2693227 Other lineage4.9 None
SRR6044875 HR-TB lineage4.9 None
SRR6045795 HR-TB lineage2.2.1 None
SRR6046133 HR-TB None
SRR6045892 Sensitive None
SRR6044835 Sensitive lineage4 None
SRR6045706 Sensitive lineage4 None
ERR2693232 Other lineage4.9 None
SRR6044790 HR-TB None
SRR6044876 Sensitive lineage4 None
SRR6044890 Other lineage4.9 None
SRR6045952 HR-TB None
SRR6045053 Other None
SRR6045217 Other lineage4 None
SRR6045233 HR-TB None
SRR6045399 Other None
SRR6046046 Other None
SRR6046066 HR-TB None
SRR6045327 HR-TB None
SRR6046225 HR-TB None
SRR6046259 Sensitive lineage4.9 None
SRR6046299 HR-TB None
SRR6046305 Other lineage4.9 None
SRR6325444 HR-TB None
SRR6046362 HR-TB None
SRR6046382 HR-TB lineage2.2.1 None
SRR6046397 Other None
SRR6046460 HR-TB None
ERR4830353 Other None
ERR2851356 Sensitive lineage4.9 None
SRR6046514 HR-TB None
SRR6325448 HR-TB None
SRR6046482 HR-TB None
SRR6046492 Other None
SRR6046611 HR-TB lineage4.9 None
SRR6046540 HR-TB None
SRR6046594 HR-TB lineage4 None
SRR6046644 HR-TB None
SRR6046733 Pre-XDR-TB lineage2.2.1 None
SRR6325447 HR-TB None
SRR6046802 Other lineage4 None
SRR6046878 HR-TB lineage4 None
SRR6046824 HR-TB None
SRR6046897 Sensitive lineage4 None
SRR6397654 HR-TB lineage4.1.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
ERR4831545 Pre-XDR-TB lineage2.2 None
ERR323037 HR-TB lineage4 None
ERR4831117 HR-TB None
ERR4816674 Sensitive lineage3 gb
SRR6325442 HR-TB None
ERR4814701 Sensitive lineage3 gb
ERR3077978 Other lineage1.1 None
ERR294210 Sensitive lineage3 None
ERR323034 HR-TB lineage3.1 None
ERR485006 HR-TB lineage4.9 None
ERR4831546 HR-TB lineage2.2 None
ERR294248 HR-TB None
ERR4831616 MDR-TB lineage2.2.1 None
SRR6832178 HR-TB lineage4.2.1.1 None
SRR6789626 Other None
ERR323036 HR-TB None
ERR294266 HR-TB None
ERR502510 Sensitive lineage4 None
ERR502532 HR-TB None
ERR5311081 HR-TB None
ERR502889 Other None
ERR502943 HR-TB None
ERR5311099 HR-TB None
ERR323038 HR-TB None
ERR5311090 HR-TB None
ERR1023295 HR-TB lineage4.1.2.1 None
SRR8217918 HR-TB None
SRR7496509 Other None
SRR7496517 Other None
SRR7535086 Other None
SRR8600127 Other La1.8.1 None
ERR323041 HR-TB None
ERR323043 HR-TB None
ERR323045 HR-TB None
ERR323056 HR-TB lineage4.4.1.2 None
ERR323063 HR-TB None
ERR323108 HR-TB lineage4 None
SRR7131023 Other lineage4.1.2.1 None
SRR7496523 Other lineage4.7 None
SRR7535082 Sensitive lineage4 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR323055 HR-TB None
ERR323054 HR-TB lineage3.1 None
ERR323107 Other lineage4 None
ERR067681 HR-TB None
ERR067699 HR-TB lineage4 None
ERR1035157 Other lineage4.9 None
ERR1023525 HR-TB lineage4 None
ERR1034652 Other None
ERR1063862 HR-TB None
ERR1063839 HR-TB lineage2.2 None
ERR1063855 Other lineage4 None
ERR1063857 HR-TB None
ERR133825 Sensitive lineage4 None
ERR1063859 HR-TB None
ERR1063883 Sensitive lineage4 None
ERR108471 HR-TB lineage4 None
ERR1063858 HR-TB None
ERR2512809 Sensitive lineage3 gb
ERR3273109 MDR-TB lineage4 None
ERR133986 HR-TB None
ERR323115 Sensitive lineage4 None
ERR3283025 HR-TB None
ERR3283017 HR-TB None
ERR3283014 HR-TB None
ERR3283010 Other La1 None
ERR3283021 HR-TB None
ERR3283024 Other None
ERR3283028 Other None
ERR3283030 HR-TB lineage4.9 None
ERR3283048 HR-TB lineage4.9 None
ERR3283032 HR-TB None
ERR3283027 HR-TB None
ERR3283031 HR-TB None
ERR3283040 HR-TB None
ERR3283036 HR-TB None
ERR3283058 Other lineage4.9 None
ERR3283047 HR-TB None
ERR3283051 Other lineage4.9 None
ERR3283055 HR-TB None
ERR3439432 Other None
ERR3283057 HR-TB lineage4 None
ERR349264 Sensitive lineage4 None
ERR3445504 HR-TB None
ERR3445501 HR-TB None
ERR3445502 HR-TB lineage4 None
ERR3445503 HR-TB None
ERR3468544 HR-TB None
ERR349300 Sensitive lineage4.9 None
ERR349265 Sensitive lineage4 None
ERR349266 Sensitive lineage4.9 None
ERR349298 Sensitive lineage4 None
ERR349296 Sensitive lineage4 None
ERR349299 Sensitive lineage4 None
ERR363421 Sensitive lineage4 None
ERR349330 Sensitive lineage4 None
ERR363437 Sensitive lineage4 None
ERR363426 Sensitive lineage4 None
ERR363449 Sensitive lineage4 None
ERR363445 Sensitive lineage4 None
ERR363447 Sensitive lineage4 None
ERR363446 Sensitive lineage4 None
ERR363453 Sensitive lineage4 None
ERR363456 Sensitive lineage4 None
ERR363498 Sensitive lineage4 None
ERR363479 Sensitive lineage4 None
ERR363499 Sensitive lineage4 None
ERR363474 Sensitive lineage4 None
ERR363506 Sensitive lineage4 None
ERR363500 Sensitive lineage4 None
ERR363502 Sensitive lineage4 None
ERR363490 Sensitive lineage4 None
ERR369159 Sensitive lineage4 None
ERR363509 Sensitive lineage4 None
ERR369156 Sensitive lineage4.9 None
ERR369157 Sensitive lineage4.9 None
ERR369151 Sensitive lineage4.9 None
ERR369158 Sensitive lineage4 None
ERR369163 Sensitive lineage4 None
ERR369160 Sensitive lineage4.9 None
ERR369162 Sensitive lineage4 None
ERR373946 Sensitive lineage4 None
ERR373945 HR-TB lineage4 None
ERR373947 Sensitive lineage4 None
ERR3797016 HR-TB None
ERR3797017 Other None
ERR3797015 HR-TB None
ERR3797014 Other None
ERR4188247 HR-TB None
ERR3797043 HR-TB None
ERR3797047 HR-TB lineage4 None
ERR3797044 Other None
ERR3797048 HR-TB None
ERR3797060 Other La1.8.1 None
ERR3797065 MDR-TB lineage4 None
ERR3797061 Other None
ERR3797069 Other None
ERR3797063 HR-TB None
ERR3797073 HR-TB La1.8.1 None
ERR3797080 HR-TB lineage4.9 None
ERR3797079 Sensitive lineage4 None
ERR3797087 Sensitive lineage4 None
ERR3804169 HR-TB lineage4.1.3 None
ERR387051 HR-TB None
ERR5336148 Other None
ERR3797046 HR-TB None
ERR3797036 HR-TB None
ERR3797064 Sensitive None
ERR3797081 Sensitive lineage4 None
ERR3797083 HR-TB None
ERR400336 Sensitive lineage4 None
ERR4024991 Other None
ERR403298 HR-TB lineage4 None
ERR4178226 Sensitive lineage4 None
ERR4188350 HR-TB None
ERR4407463 HR-TB None
ERR473323 HR-TB lineage4.9 None
ERR473332 Other lineage4 None
ERR4769452 HR-TB None
ERR4769444 HR-TB lineage4.9 None
ERR4769457 Other lineage4.9 None
ERR4769450 HR-TB None
ERR4769474 HR-TB lineage4 None
ERR4799025 Pre-XDR-TB None
ERR4769497 HR-TB La1.2 None
ERR4796254 Sensitive lineage4 None
ERR2513594 Sensitive lineage3 gb
ERR4796929 Sensitive lineage4 None
ERR4798262 HR-TB La1 None
ERR4769521 HR-TB None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4797264 Sensitive None
ERR4797474 Other None
ERR4798099 Other None
ERR4798406 HR-TB None
ERR4811493 HR-TB None
ERR4799513 HR-TB lineage2.2 None
ERR4799547 Sensitive lineage2.2.1 None
ERR4800341 Other lineage3 None
ERR4811105 HR-TB None
ERR4799378 Sensitive lineage4 None
ERR4810624 HR-TB lineage2.2 None
ERR4810741 HR-TB None
ERR4811022 HR-TB None
ERR4811030 Sensitive None
ERR4811142 MDR-TB None
ERR6358991 HR-TB None
ERR6358837 HR-TB None
ERR6865502 Sensitive lineage4 None
ERR6359045 HR-TB None
ERR736837 Other lineage4.9 None
ERR6866022 Other None
ERR6866547 Sensitive lineage4 None
ERR6866639 Other None
ERR6866807 HR-TB lineage4 None
ERR702406 HR-TB None
ERR6866410 Sensitive None
ERR702404 HR-TB None
ERR736817 HR-TB lineage4.3.4 None
ERR736831 HR-TB lineage4.9 None
ERR736835 HR-TB None
ERR736839 Other None
ERR736848 HR-TB None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR736872 Sensitive lineage4 None
ERR736875 HR-TB lineage4 None
ERR736867 HR-TB None
ERR736874 HR-TB None
ERR772255 MDR-TB lineage4.3.2 None
SRR10808668 Sensitive lineage2.2.1 None
ERR7911670 Pre-XDR-TB lineage2.2 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR9119669 HR-TB None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786671 Other None
SRR10808399 Sensitive lineage4 None
ERR8976043 HR-TB None
ERR9117709 HR-TB None
ERR9117721 HR-TB lineage1.1.2 None
ERR9787197 Other None
SRR1165506 Other lineage4.1.2.1 None
SRR1162864 HR-TB lineage4.1.2.1 None
SRR10808805 Sensitive None
SRR10809074 Sensitive lineage4 None
SRR1167384 Other lineage4 None
SRR1165584 Other lineage4.1.2.1 None
SRR1166821 HR-TB lineage4.1.2.1 None
SRR1169249 Other La3 None
SRR1169194 Other None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1172234 Other None
SRR1172728 MDR-TB None
SRR1172817 HR-TB None
SRR1172807 Sensitive lineage4.9 None
SRR1172951 Other None
SRR1172857 MDR-TB None
SRR1173453 Other lineage4.4.1.1 None
SRR1173218 Pre-XDR-TB lineage4.3.3 None
SRR1173330 Pre-XDR-TB lineage4 None
SRR1173400 Other None
SRR1173363 HR-TB None
SRR1173629 Other None
SRR1173568 Other lineage4.9 None
SRR1173562 HR-TB lineage4 None
SRR1173633 HR-TB lineage4.9 None
SRR1173767 HR-TB lineage4.4.1.1 None
SRR1173777 Other lineage4 None
SRR1180137 Other lineage2.2.1 None
SRR1173778 Other None
SRR1175506 Sensitive lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1175513 Other lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR1180147 Other lineage2.2.1.1 None
SRR1180172 Other lineage2.2.1 None
SRR1180250 Other lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180420 Sensitive lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR1181020 Other lineage2.2.1 None
SRR1180444 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181237 Sensitive lineage2.2 None
SRR1181283 Sensitive lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1181289 Other lineage2.2.1 None
SRR1184381 MDR-TB None
SRR1181368 Other lineage4.9 None
SRR1183145 Other lineage2.2.1 None
SRR1184294 HR-TB None
SRR1181390 Sensitive lineage2 None
SRR1183054 Sensitive lineage4.9 None
SRR1183106 Other lineage2.2.1.1 None
SRR1183144 Other lineage2.2.1 None
SRR1196546 HR-TB None
SRR1184380 HR-TB None
SRR1184388 Other None
SRR12142341 HR-TB None
SRR1196566 HR-TB None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR1196677 HR-TB lineage2 None
SRR1196768 MDR-TB None
SRR11972367 Sensitive lineage2.2.1 None
SRR12416824 HR-TB None
SRR13861434 RR-TB lineage4.9 None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR14801749 Sensitive None
SRR14782405 HR-TB None
SRR18213713 HR-TB lineage4.5 None
SRR15368973 Other None
SRR20969731 Other lineage2.2.1 None
SRR19303884 HR-TB None
SRR19304036 HR-TB None
SRR20969677 HR-TB lineage2 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR19295647 Sensitive lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
SRR25827418 Pre-XDR-TB lineage9;lineage3.1 None
SRR20970016 Other lineage2.2 None
ERR176779 HR-TB None
SRR8692905 HR-TB None
ERR4815604 HR-TB None
ERR176778 HR-TB None
SRR3675464 HR-TB lineage4.1 None
SRR3675482 HR-TB None
ERR176793 Other lineage4.1.1 None
SRR6325445 HR-TB None
SRR3675465 HR-TB None
ERR1035239 HR-TB None
ERR158583 HR-TB None
SRR3675502 Other None
ERR4814352 HR-TB lineage2.2.1 None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
ERR161033 HR-TB None
SRR3675222 Other None
ERR161039 Sensitive lineage4.3.4 None
SRR3675486 HR-TB None
ERR4814536 MDR-TB lineage3;lineage2.1 None
ERR181744 HR-TB None
SRR3675488 HR-TB None
SRR3675501 HR-TB None
SRR3675221 HR-TB None
ERR702405 Sensitive lineage2.1 None
SRR3675236 HR-TB None
SRR3675265 Other lineage4 None
SRR3675234 Other None
ERR181824 HR-TB lineage4 None
SRR3675270 HR-TB None
ERR176651 HR-TB None
SRR3675280 HR-TB lineage4.9 None
SRR3675311 Other None
ERR176568 Other lineage4.3 None
ERR176643 HR-TB None
ERR181887 HR-TB None
SRR3675312 HR-TB lineage4 None
SRR3675456 HR-TB None
SRR3675383 HR-TB None
SRR3675545 HR-TB None
SRR3675510 Other None
ERR176751 HR-TB None
ERR2027263 Other lineage4 None
SRR3675550 Other None
ERR212001 HR-TB None
SRR3675574 HR-TB None
ERR212034 HR-TB None
ERR212125 HR-TB lineage4 None
SRR5341422 HR-TB lineage2.1 None
SRR3675555 HR-TB None
ERR4817060 RR-TB None
SRR3675558 HR-TB None
ERR212123 Other None
ERR212121 HR-TB None
SRR3675571 HR-TB None
ERR4816466 HR-TB None
ERR212138 HR-TB lineage4 None
SRR3742665 HR-TB None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR4818018 HR-TB lineage2.2.1 None
ERR4816585 Other lineage2.2 None
ERR4816656 HR-TB None
ERR4817692 HR-TB lineage4;lineage1.1.2 None
ERR4817896 HR-TB lineage2.2.1 None
SRR8380865 Sensitive lineage1.2.2.2 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR228287 Sensitive lineage3 None
ERR3275196 Other lineage2.2.1 nl
ERR2446566 Other lineage4.1 None
ERR4818021 Other La1.8.1 None
ERR1035162 Other None
ERR4818929 HR-TB None
ERR234659 HR-TB None
ERR4818252 Other lineage4.1.1.2 None