Rv1908c - c.396T>G


Drug resistance types
48 Sensitive 3 RR-TB 60 HR-TB 12 MDR-TB 5 Pre-XDR-TB 1 XDR-TB 102 Other
lineage Counts
lineage Count
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.9 96
lineage4 3
La1.7;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 9
19
lineage2.1 5
lineage2.1;lineage6.3 2
lineage2.1;lineage4.9 13
lineage4.3.3 2
lineage3.1 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La3;lineage2.1;lineage4.9 2
M.canetti;lineage2.1;lineage6.3 1
lineage4.4.1.1 1
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage1.1.2 4
lineage2.2.1 9
lineage4.8;lineage4.9 2
lineage4.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
La3;lineage2.2.1 1
lineage4.7 1
lineage4.6.5 1
lineage4.3.4.2.1 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage1;lineage4.9 1
lineage4.1.1.2 1
lineage3 3
lineage3.1.1 1
La1;lineage4.9 1
lineage4.9;lineage6.3 6
lineage1.2.2.2 1
La3 2
M.canetti;lineage2.1;lineage4.9 2
lineage1.1.3.1 1
lineage4.4.1.2 1
lineage4.2;lineage4.8.1;lineage4.9 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.8 3
lineage4.1.2 2
La1.2.BCG;La1.8.1 1
La3;lineage2.1;lineage6.3 1
lineage4.6.1.1 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.9;lineage9 1
La3;lineage2 1
lineage2.2.1;lineage6.3 1
lineage4.1.1.1 1
lineage4.3.4.1 2
La1;lineage4.1.2 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La3;lineage4.8 1
lineage4.3.4 1
La3;M.canetti;lineage2.2.1 1
La3;lineage4.9 2
lineage2.2.1;lineage3 1
lineage4.3.2.1 1
spoligotype Counts
spoligotype Count
None 231
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR29096527 Sensitive lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR3273109 HR-TB lineage4 None
SRR29096195 Sensitive lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR7535086 Other None
ERR926159 Sensitive lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR702406 Other lineage2.1 None
ERR1063849 HR-TB lineage4.9 None
ERR9117709 Other None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR1173400 Other lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR28351442 HR-TB lineage3.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR736834 Sensitive lineage4.9 None
ERR212125 HR-TB lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
SRR1184294 Other lineage4.9 None
SRR28044591 Sensitive lineage1.1.2 None
SRR28119805 Other lineage4.9 None
ERR4817060 Other None
SRR28119752 Other lineage4.9 None
ERR181824 HR-TB lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR6866022 Other lineage4.8;lineage4.9 None
ERR736875 HR-TB lineage4.9 None
SRR1196566 Other lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR1158918 Sensitive lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
SRR18213713 HR-TB None
SRR29096795 Sensitive lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR1063896 Sensitive None
SRR1710057 Other lineage2.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR1159378 Other lineage4.9 None
ERR3797069 Other lineage4.9 None
ERR4819932 Other lineage4.7 None
SRR3416776 Other lineage2.1 None
ERR4188247 HR-TB lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR7801175 HR-TB lineage4.6.5 None
ERR6358979 Other lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR11466072 Sensitive lineage4.3.4.2.1 None
SRR5341310 Other lineage1.1.2 None
ERR926162 Sensitive lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR736848 Other lineage4.9 None
ERR323107 Sensitive lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR5341425 Other lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR6359066 HR-TB lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
SRR6045526 Other lineage4.9 None
ERR736856 Sensitive lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR502510 Sensitive lineage4.9 None
SRR1173384 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
SRR6789626 Other None
SRR29096194 Sensitive lineage4.9 None
ERR4818252 Sensitive lineage4.1.1.2 None
ERR4797588 MDR-TB lineage3 None
ERR926161 Sensitive lineage4.9 None
SRR1196474 Other lineage3.1.1 None
ERR6359074 HR-TB lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR3675236 Other None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR751326 Other lineage4.9 None
ERR4797201 Other lineage1.2.2.2 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4800341 Other lineage3 None
SRR1172728 RR-TB La3 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR126597 HR-TB lineage4.4.1.2 None
ERR4797193 HR-TB lineage1.1.2 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR9971112 Other lineage2.2.1 None
ERR4797264 Sensitive lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR4024991 Other lineage4.8;lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR29096225 Sensitive lineage4.9 None
ERR13265833 Other lineage4.9 None
SRR3675221 Other lineage4.9 None
ERR2514692 Other None
SRR25827682 Other None
SRR1172857 Other None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4769442 Sensitive lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR4819462 Sensitive lineage4.9 None
ERR926156 Sensitive lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR2693252 Sensitive lineage4.9 None
ERR3275201 Sensitive lineage4.8 nl
ERR4818347 Other lineage4.1.2 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR4796577 HR-TB None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR1196768 MDR-TB None
ERR137286 Other lineage4.9 None
ERR323066 Sensitive lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3675275 Other lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR20969677 HR-TB La3;lineage2 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR473323 HR-TB lineage4.9 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR502511 Sensitive lineage4.9 None
SRR25827687 MDR-TB lineage1.1.2 None
SRR5153091 HR-TB lineage4.3.3 None
ERR6866410 Sensitive lineage4.9 None
ERR702405 Sensitive lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR2027263 Other lineage4 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR4821655 HR-TB lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
SRR29051077 Other lineage4.9 None
ERR4816470 HR-TB lineage3 None
ERR4797184 Sensitive lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
SRR5341461 HR-TB lineage4.9 None
SRR6511621 Sensitive lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR2446570 Sensitive lineage4.8 nl
SRR5341453 Other lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR1023509 Other lineage4.9 None
SRR1172817 Other La3 None
SRR3675246 Other lineage4.9 None
SRR5341308 Sensitive lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR1034634 HR-TB lineage4.9 None
SRR5341467 Other lineage4.9 None
ERR779852 Sensitive lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
SRR5341298 Sensitive lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR1184381 MDR-TB None
SRR28351339 MDR-TB lineage4 None
ERR234659 Other None
ERR3275996 HR-TB lineage4.3.4.1 nl
ERR4818536 Other lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR4797474 Sensitive lineage4.9 None
SRR1184372 MDR-TB None
SRR3675572 Other None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR1172951 Other lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
ERR3468577 Sensitive None
SRR1196583 Other lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR4817893 Other La3;lineage4.8 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR736817 HR-TB lineage4.3.4 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR4817735 Other lineage4.8 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR9970980 HR-TB lineage4.1.2 None
SRR5341455 Sensitive lineage4.9 None
ERR13267017 Pre-XDR-TB lineage2.2.1 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4815604 Other None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
ERR3283030 HR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR29016901 Other La3;lineage4.9 None
ERR4816999 Other None
ERR124636 Sensitive lineage4.9 None
ERR161037 Other lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR1196546 Other lineage4.9 None