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SRA data
Rv2245
- c.573C>T
Drug resistance types
17 Sensitive
12 RR-TB
62 HR-TB
37 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
44 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
39
M.canetti;lineage2.1;lineage4.9
23
La3;M.canetti;lineage2.1;lineage4.9
12
La3;lineage4.9
8
M.canetti;lineage2.1;lineage4.9;lineage6.3
6
lineage2.2.1
6
lineage4.1.2.1
6
lineage2.1;lineage4.9
5
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
4
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
4
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
173
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR038268
HR-TB
La3;M.canetti;lineage4.8;lineage4.9
None
ERR1023295
MDR-TB
M.canetti;lineage2.1;lineage4.1.2.1
None
ERR1035239
MDR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR1063846
HR-TB
lineage4.9
None
ERR11252558
Other
lineage4.6.3;lineage4.9
None
ERR11252599
Other
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3
None
ERR11252664
Other
lineage2.2.1
None
ERR11465665
Other
lineage4.1.1.3
None
ERR11489020
MDR-TB
lineage2.2.1
None
ERR124642
MDR-TB
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
None
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