EBG00000313339 - n.1712G>T


Drug resistance types
50 Sensitive 5 RR-TB 88 HR-TB 27 MDR-TB 9 Pre-XDR-TB 4 XDR-TB 161 Other
lineage Counts
lineage Count
lineage2.2.1 18
lineage4.9 105
lineage2.1 2
lineage4.8 8
lineage3 6
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.1.2.1 15
La1.2 2
lineage4.9;lineage6.3 10
La1.2.BCG 1
lineage5.2 2
21
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage2.2.2;lineage4 1
lineage4.3.4.2.1 4
lineage4.6.2.2 3
lineage4.3.2.1 2
lineage4.1 1
lineage2.1;lineage4.9 10
lineage1.1.1 2
M.canetti;lineage2.2 2
lineage4.2;lineage4.9 1
La3;lineage2.1;lineage4.9;lineage6.3 3
lineage4.3.3 4
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 7
La3;lineage2.1;lineage4.9 2
lineage4.9.1 1
La3;lineage4.9 6
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage4.1.2 1
La1.7;lineage4.9 6
La1.6;La3;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4 4
lineage2.2.1;lineage6.3 1
lineage4.1.1.3 6
M.canetti;lineage2.2.2;lineage6.2 2
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage4.1.3 2
La3 2
M.canetti;lineage2.1;lineage4.9 2
lineage4.4.1.2 1
lineage1.1.2 1
La3;lineage2.2.1 2
lineage3.1 1
La1.7;lineage3;lineage4.9;lineage7 1
La1.7;lineage4.9;lineage7 3
La1.7;lineage4.2 1
lineage2.2.1.1 4
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.1.1.1 4
lineage4.3.2;lineage4.9 1
La1.7;M.canetti;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage3.1;lineage9 1
lineage4.6.1.1 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage4.3.4 1
La3;M.canetti;lineage2.2.1 1
lineage2.1;lineage6.3 1
M.canetti;lineage4.9 2
lineage3.1.2 1
La1.6;La3;lineage4.9 1
La3;lineage3 1
lineage4.1.2.1.1 1
lineage2.2.2 1
lineage4.9;lineage9 2
La1.7;lineage3.1;lineage4 1
lineage4.2;lineage4.8.1;lineage4.9 1
La2;lineage4.9;lineage9 1
La1.7.1;lineage4.9 1
La3;lineage4.8 1
lineage4.8.1 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage6.1.1 2
lineage4.7 1
La1.6;lineage4 1
lineage2.2;lineage4 1
lineage6.1.3 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La3;lineage2.1;lineage6.3 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage6.3.1 1
La3;lineage2 1
La2;lineage4.9 1
lineage2.2 1
La3;lineage2.2.2 1
lineage1;lineage4.9 1
lineage2.2.1;lineage3 1
La1.8.1 2
La1.7.1;La1.7.X-unk4 1
lineage3.1.1 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage1.2.2.2 1
lineage4.3.4.1 1
spoligotype Counts
spoligotype Count
None 344
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR26937107 MDR-TB lineage2.2.1 None
ERR1034634 HR-TB lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR2229542 Other lineage4.8 None
ERR4407452 Other lineage3 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR212125 HR-TB lineage4.9 None
ERR9786656 Sensitive lineage4.1.2.1 None
SRR23961549 Other La1.2 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR1183144 Other lineage2.2.1 None
ERR3283018 HR-TB lineage4.9 None
SRR1915487 Other La1.2.BCG None
ERR9119500 MDR-TB lineage5.2 None
SRR3675221 Other lineage4.9 None
SRR1172857 Other None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
ERR234659 Other None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR1173153 Other lineage4.9 None
SRR29093105 Other lineage2.2.2;lineage4 None
ERR3797079 Sensitive lineage4.9 None
ERR502908 HR-TB lineage2.2.1 None
ERR9786601 Other lineage4.1.2.1 None
ERR176549 Other lineage4.3.4.2.1 None
ERR176778 HR-TB lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR926156 Sensitive lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
ERR4797474 Sensitive lineage4.9 None
SRR1184372 MDR-TB None
SRR1173633 Other lineage4.9 None
SRR12708396 MDR-TB lineage4.3.2.1 None
ERR9786440 Other lineage4.1 None
SRR5341333 Other lineage2.1;lineage4.9 None
SRR21690362 Other lineage1.1.1 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR3275201 Sensitive lineage4.8 nl
ERR502524 HR-TB lineage4.9;lineage6.3 None
SRR1196566 Other lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
ERR1063858 HR-TB lineage4.9 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR926157 Sensitive lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786569 Other lineage4.8 None
SRR1196583 Other lineage4.9 None
ERR3797029 Other lineage4.9 None
SRR29016780 Other lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR2517514 Sensitive lineage4.8 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR1063896 Sensitive None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
ERR245758 Other lineage4.9.1 None
SRR26399973 Other La3;lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR28119741 Pre-XDR-TB lineage2.2.1 None
SRR9970980 HR-TB lineage4.1.2 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR9896144 Other lineage3 None
SRR5341332 Pre-XDR-TB lineage3 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1184312 Other lineage2.2.1 None
ERR6359066 HR-TB lineage4.9 None
ERR2027263 Other lineage4 None
ERR3797015 HR-TB lineage4.9 None
SRR29016901 Other La3;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR8692887 Other None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4819051 Sensitive lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR1063846 HR-TB lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR6458423 HR-TB lineage2.2.1 None
ERR11465235 Sensitive lineage4.3.4.2.1 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR926163 Other lineage4.9 None
ERR176779 HR-TB lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR7535086 Other None
ERR926159 Sensitive lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR990545 Other lineage3 None
ERR3804169 HR-TB lineage4.1.3 None
ERR4872094 MDR-TB lineage5.2 None
ERR4817731 HR-TB lineage4.9 None
ERR2446570 Sensitive lineage4.8 nl
ERR926154 Sensitive lineage4.9 None
SRR1172728 RR-TB La3 None
ERR971389 Sensitive lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
ERR3797047 MDR-TB lineage4.9 None
SRR1173400 Other lineage4.9 None
SRR1180172 Other lineage2.2.1 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
SRR1172234 Other lineage4.9 None
SRR5341308 Sensitive lineage4.9 None
ERR3797086 Sensitive lineage4.9 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
SRR29050859 Other lineage4.9 None
SRR6044835 Other lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR23961559 Other La1.7;lineage4.2 None
SRR1180147 Other lineage2.2.1.1 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9786642 Other lineage4.1.2.1 None
SRR1184381 MDR-TB None
SRR28351341 Other lineage4.1.1.1 None
ERR987722 MDR-TB None
SRR6789621 Other lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR11465024 Other lineage4.1.1.3 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR1180226 HR-TB lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
ERR3470647 Other lineage3 None
ERR4819422 HR-TB lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR926165 Sensitive lineage4.9 None
SRR15600376 HR-TB lineage2.2.1.1 None
SRR1173363 Other None
SRR3675572 Other None
ERR13265528 Other lineage4.9;lineage6.3 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR6785413 Other lineage2.2.1 None
SRR6045010 Sensitive lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR926155 Sensitive lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
ERR4796577 HR-TB None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
SRR22249687 Sensitive lineage4.8 None
SRR5341373 Other lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
SRR1173562 Sensitive lineage4.9 None
ERR11252736 Other lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR2199988 MDR-TB lineage4.1.1.3 None
SRR1175074 Other None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
ERR550637 MDR-TB lineage4.1.1.3 None
SRR1172844 Sensitive lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR5341400 Sensitive lineage4.9 None
SRR1169194 Other lineage4.9 None
SRR7496517 Other None
ERR4820773 HR-TB lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR4797037 Pre-XDR-TB lineage3.1.2 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR1023302 MDR-TB La3;lineage3 None
ERR736848 Other lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
SRR3675448 Other lineage4.9 None
ERR4972483 Pre-XDR-TB lineage4.1.2.1.1 None
ERR11138607 Pre-XDR-TB lineage2.2.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR15368973 Other lineage4.9 None
ERR1035157 Other lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
ERR181887 Other lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR3283030 HR-TB lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR26159043 Other lineage4.9 None
SRR6789626 Other None
ERR9786617 Other lineage4.1.1.1 None
ERR216938 HR-TB La1.7;lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR3675248 Other lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR867540 MDR-TB lineage2.2.1 None
ERR553132 MDR-TB lineage4.1.2.1 None
ERR176793 Other lineage4.1.1.1 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR9786619 Sensitive lineage4.8 None
SRR1165699 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR11465025 Other lineage4.1.1.3 None
ERR4819877 HR-TB lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4800341 Other lineage3 None
ERR4816478 HR-TB lineage4 None
SRR5341453 Other lineage4.9 None
ERR9786711 Sensitive lineage4.6.2.2 None
SRR12416842 HR-TB lineage4.9 None
ERR702406 Other lineage2.1 None
ERR926164 Other lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
SRR3675549 Other lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR12015083 Other La3;lineage4.8 None
ERR6198317 Other La1.2 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR3799304 Other lineage6.1.1 None
SRR1184024 RR-TB lineage2.2.1.1 None
SRR1183111 HR-TB lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
SRR3675311 Other lineage4.9 None
SRR9971112 Other lineage2.2.1 None
SRR1184294 Other lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR29096174 Sensitive La1.7;lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR4796929 Sensitive lineage4.9 None
ERR502912 Other lineage2.2.1 None
ERR3804155 Other lineage4.1.2.1 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR7131023 Other lineage4.1.2.1 None
ERR3797070 Other lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR1173118 Other lineage2.2.1 None
SRR25827682 Other None
ERR245716 Sensitive lineage2.2.1 None
ERR181824 HR-TB lineage4.9 None
ERR9786671 Other None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR736875 HR-TB lineage4.9 None
SRR7496523 Other lineage4.7 None
ERR9786604 Other None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR28351554 Sensitive La1.6;lineage4 None
SRR8692863 Other lineage2.2;lineage4 None
SRR21732980 Other lineage4.3.3 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4407463 HR-TB None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR9787165 Other lineage6.1.3 None
ERR4819241 Other lineage4.9 None
SRR1172951 Other lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR1196768 MDR-TB None
ERR176651 Other lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR9787014 Other lineage6.1.1 None
ERR2514327 HR-TB lineage4.8 None
SRR6044875 Sensitive lineage4.9 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR1173788 Sensitive lineage4.9 None
ERR9787139 Other lineage6.3.1 None
SRR20969677 HR-TB La3;lineage2 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR550636 MDR-TB lineage4.1.1.3 None
ERR9786384 Sensitive lineage4.1.2.1 None
ERR9786682 Other lineage4.1.2.1 None
SRR1173355 Other lineage4.9 None
ERR9786627 Other lineage4.1.2.1 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR323039 HR-TB La2;lineage4.9 None
SRR1196677 Other lineage2.2 None
SRR1173218 Other lineage4.3.3 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR11466146 Other lineage4.3.4.2.1 None
ERR13245558 MDR-TB La3;lineage2.2.2 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR926160 Sensitive lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR1173384 Other lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
SRR1173706 Other lineage4.9 None
ERR3797019 Other La1.8.1 None
SRR29051077 Other lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR3283011 Other La3;lineage4.9 None
ERR9786515 Other lineage4.1.2.1 None
SRR1196474 Other lineage3.1.1 None
SRR1196546 Other lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
ERR3283044 Other lineage4 None
ERR4797201 Other lineage1.2.2.2 None
SRR28119777 Other lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR3283010 Sensitive La1.8.1 None
SRR1172817 Other La3 None
SRR6785527 Sensitive lineage2.2.1 None
ERR473332 Other lineage4.9 None
SRR7496509 Other None
SRR12416840 MDR-TB lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None