EBG00000313339 - n.1712G>T


Drug resistance types
54 Sensitive 4 RR-TB 135 HR-TB 32 MDR-TB 18 Pre-XDR-TB 0 XDR-TB 151 Other
lineage Counts
lineage Count
140
lineage3.1.2.2;lineage3.1.2.1 1
lineage3 8
lineage4 49
lineage4.6.1.1 2
lineage2.2.1 27
lineage4.4.1.1 2
lineage4.9 45
lineage4.3.3 5
lineage2.2.1.1 5
lineage1.2.1.2 1
lineage3.1 2
lineage2 3
lineage1.1.1 1
lineage4.1.1.3 5
lineage4.3.4.1 1
lineage4.5 2
lineage2.1 4
lineage2.2 4
lineage4.4.2 1
lineage9;lineage3.1 1
lineage4.8 13
lineage4;lineage2.2 1
lineage2.2.1;La3 1
La1.2 2
lineage4.9;La3 1
lineage4.2;La1.7 1
lineage4.1.1.1 1
lineage6.3;lineage2.2.1 1
lineage3;lineage2.2.1 1
lineage4.1.1 2
lineage4.1.2.1 16
lineage4.3.4.2.1 5
lineage1.1.2 3
La1.8.1 6
lineage4.2.2.2 1
lineage4.1.2 2
lineage4.7 2
lineage4.1.2.1.1 1
lineage5.2 2
lineage4.2.1 1
La2 1
lineage4.3.2.1 1
lineage4.4.1.2 1
lineage3;La3 1
La1 1
lineage4.6.2.2 3
lineage6.1.1 2
lineage4.1.3 2
lineage4;lineage3.1 1
lineage3.1.2 2
lineage1.2.2.2 1
lineage4.8;La3 1
lineage4.9.1 1
lineage4.3.4 1
lineage4.1 1
lineage6 1
lineage6.3.1 1
spoligotype Counts
spoligotype Count
None 394
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1169194 Other None
ERR987729 HR-TB lineage3.1.2.2;lineage3.1.2.1 None
ERR990545 Other lineage3 None
SRR10809074 Sensitive lineage4 None
ERR987722 HR-TB None
ERR987733 RR-TB lineage4.6.1.1 None
ERR9896144 Other lineage3 None
SRR10315567 Other lineage2.2.1 None
SRR1158918 Sensitive lineage4 None
SRR1172844 MDR-TB lineage4.4.1.1 None
SRR1172146 Sensitive lineage4.9 None
SRR1172310 HR-TB None
SRR1172817 HR-TB None
SRR1172234 Other None
SRR1172728 MDR-TB None
SRR1172951 Other None
SRR1172857 MDR-TB None
SRR1173118 Other None
SRR1173218 Pre-XDR-TB lineage4.3.3 None
SRR1173153 HR-TB None
SRR1173166 Other lineage4.9 None
SRR1173400 Other None
SRR1173330 Pre-XDR-TB lineage4 None
SRR1173384 Other lineage4 None
SRR1173363 HR-TB None
SRR1173562 HR-TB lineage4 None
SRR1173484 Other lineage4 None
SRR1173706 Other lineage4.9 None
SRR1173633 HR-TB lineage4.9 None
SRR1173629 Other None
SRR1175049 RR-TB None
SRR1173788 Other None
SRR1173778 Other None
SRR1174897 HR-TB None
SRR1175513 Other lineage4.9 None
SRR1175074 MDR-TB None
SRR1175090 Other lineage4.9 None
SRR1180172 Other lineage2.2.1 None
SRR1180147 Other lineage2.2.1.1 None
SRR12006550 Other lineage1.2.1.2 None
SRR1183106 Other lineage2.2.1.1 None
SRR1184346 HR-TB lineage3.1 None
SRR1184372 MDR-TB None
SRR1184380 HR-TB None
SRR1184388 Other None
SRR1196474 HR-TB lineage3.1 None
SRR1196494 MDR-TB None
SRR1196566 HR-TB None
SRR1196677 HR-TB lineage2 None
SRR1196768 MDR-TB None
SRR1183144 Other lineage2.2.1 None
SRR1184024 Other lineage2.2.1.1 None
SRR1184294 HR-TB None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR1184312 HR-TB lineage2.2.1 None
SRR1184381 MDR-TB None
SRR1196546 HR-TB None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR12142341 HR-TB None
SRR12416840 MDR-TB lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
SRR12416824 HR-TB None
SRR13591342 HR-TB lineage4.1.1.3 None
SRR13837613 Sensitive lineage4.9 None
SRR13837614 Sensitive lineage4.9 None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR15368973 Other None
SRR15600376 HR-TB lineage2.2.1.1 None
SRR19303884 HR-TB None
SRR18213713 HR-TB lineage4.5 None
SRR19295647 Sensitive lineage4.9 None
SRR1710057 Other lineage2.1 None
SRR18910194 HR-TB lineage2.2 None
SRR20969677 HR-TB lineage2 None
SRR19304036 HR-TB None
SRR20969652 Sensitive lineage4.4.2 None
SRR25827682 Other None
SRR25827418 Pre-XDR-TB lineage9;lineage3.1 None
ERR11081258 Other lineage4.8 None
SRR21677886 Sensitive lineage4.9 None
ERR11081257 Other lineage4.8 None
SRR8692879 HR-TB lineage4.9 None
ERR11138607 Pre-XDR-TB lineage2.2.1 None
SRR8692790 RR-TB lineage4 None
SRR8692812 Other lineage4.9 None
SRR8692854 Other lineage4.9 None
SRR8692898 Other lineage4.9 None
SRR8692893 Other lineage4.9 None
SRR8692881 Other lineage4.9 None
SRR8692771 Other lineage4.9 None
SRR8692905 HR-TB None
SRR8692824 Other lineage4.9 None
SRR8692782 Other lineage4.9 None
SRR8692800 Other lineage4 None
SRR8692818 Other lineage4.9 None
SRR8692855 Other lineage4.9 None
SRR8692828 Other lineage4.9 None
SRR8692776 Other lineage4.9 None
SRR8692863 Other lineage4;lineage2.2 None
SRR8692878 Other lineage4.9 None
SRR8692867 Other lineage4.9 None
SRR8692887 Other None
SRR8692899 Other lineage4.9 None
SRR26937071 MDR-TB lineage2.2.1;La3 None
SRR21732980 Other lineage4.3.3 None
SRR26937107 MDR-TB lineage2.2.1 None
SRR23961549 Other La1.2 None
SRR22249687 Sensitive lineage4.8 None
SRR26399973 Other lineage4.9;La3 None
SRR26159043 Other lineage4.9 None
SRR23961559 Other lineage4.2;La1.7 None
ERR176779 HR-TB None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR28119741 Pre-XDR-TB lineage2.2.1 None
SRR28119811 Other lineage6.3;lineage2.2.1 None
SRR25827497 Pre-XDR-TB lineage3;lineage2.2.1 None
ERR176778 HR-TB None
ERR4815604 HR-TB None
ERR2179785 Sensitive lineage4.5 None
ERR4814352 HR-TB lineage2.2.1 None
ERR550636 MDR-TB lineage4.1.1.3 None
SRR3675465 HR-TB None
ERR176793 Other lineage4.1.1 None
SRR3416776 Other lineage2.1 None
SRR3675221 HR-TB None
SRR3675236 HR-TB None
SRR3675234 Other None
ERR176651 HR-TB None
SRR3675232 Other lineage4.1.2.1 None
SRR3675246 Sensitive lineage4 None
ERR181824 HR-TB lineage4 None
ERR176518 Sensitive lineage4.3.4.2.1 None
SRR3675311 Other None
SRR3675312 HR-TB lineage4 None
ERR176740 HR-TB None
ERR181887 HR-TB None
ERR4815752 Other lineage4.9 None
ERR4816999 Other None
ERR2229542 Other lineage4.8 None
ERR212125 HR-TB lineage4 None
SRR3675572 Other None
ERR2027263 Other lineage4 None
ERR4816151 Other lineage4.8 None
SRR5341422 HR-TB lineage2.1 None
ERR212121 HR-TB None
SRR3675574 HR-TB None
SRR3742665 HR-TB None
SRR3675571 HR-TB None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR5341384 Sensitive lineage4.9 None
ERR502912 Other lineage2.2.1 None
ERR4816656 HR-TB None
ERR4816760 Sensitive lineage4.1.2.1 None
ERR553132 MDR-TB lineage4.1.2.1 None
SRR7898221 MDR-TB lineage1.1.2 None
ERR4817896 HR-TB lineage2.2.1 None
SRR7496472 Other None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4818021 Other La1.8.1 None
ERR4818110 Sensitive lineage4.9 None
ERR234659 HR-TB None
ERR245716 Sensitive lineage2.2.1 None
ERR2513470 Other lineage4.2.2.2 None
ERR4819051 Other lineage4 None
ERR4818929 HR-TB None
ERR4818347 Other lineage4.1.2 None
SRR5341373 HR-TB lineage4 None
SRR5341453 Sensitive None
SRR5007188 Other lineage4 None
ERR3275201 Sensitive lineage4.8 nl
ERR2514327 HR-TB lineage4.8 None
SRR5341400 HR-TB lineage4 None
SRR5341300 Other lineage4 None
SRR5341293 HR-TB lineage4 None
SRR5341432 HR-TB lineage4 None
ERR2514692 Other None
SRR5341313 HR-TB None
SRR5341302 HR-TB None
SRR5341308 Sensitive lineage4 None
SRR5341333 HR-TB None
SRR5341315 Sensitive None
ERR4819932 Other lineage4.7 None
SRR5341332 Pre-XDR-TB lineage3 None
SRR5341461 Sensitive lineage4 None
ERR2446570 Sensitive lineage4.8 nl
SRR5341467 Other lineage4 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
ERR2517514 Sensitive lineage4.8 None
SRR5341469 Other lineage4 None
ERR2693231 Other None
SRR5341470 HR-TB None
ERR2693254 Other None
ERR2693230 Other None
ERR2693257 Other None
SRR6044875 HR-TB lineage4.9 None
SRR6045795 HR-TB lineage2.2.1 None
SRR6045526 HR-TB None
SRR6044790 HR-TB None
SRR6044835 Sensitive lineage4 None
ERR2693232 Other lineage4.9 None
SRR6044876 Sensitive lineage4 None
SRR6045233 HR-TB None
SRR6045010 Other lineage4 None
SRR6046066 HR-TB None
SRR6046225 HR-TB None
SRR6046397 Other None
SRR6046385 Other lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6046644 HR-TB None
ERR2851356 Sensitive lineage4.9 None
SRR6046540 HR-TB None
ERR4972483 Pre-XDR-TB lineage4.1.2.1.1 None
ERR4872094 MDR-TB lineage5.2 None
ERR11466146 Other lineage4.3.4.2.1 None
ERR4831546 HR-TB lineage2.2 None
ERR4831545 Pre-XDR-TB lineage2.2 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR4831618 MDR-TB lineage2.1 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR6785227 Other lineage2.2.1 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR4831657 MDR-TB lineage2.2.1 None
SRR6785413 Other lineage2.2.1 None
SRR6785263 Sensitive lineage2.2.1 None
SRR6785268 Sensitive lineage4.2.1 None
SRR7496517 Other None
SRR6789626 Other None
SRR6785527 Sensitive lineage2.2.1 None
ERR294266 HR-TB None
ERR502524 HR-TB La2 None
ERR502532 HR-TB None
ERR502908 HR-TB lineage2.2.1 None
SRR7131023 Other lineage4.1.2.1 None
SRR7496509 Other None
SRR9970980 Other lineage4.1.2 None
SRR7496523 Other lineage4.7 None
SRR7535086 Other None
ERR323039 HR-TB None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR9970979 Sensitive lineage4.8 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR9971112 Other lineage2.2.1 None
ERR323053 HR-TB None
ERR323043 HR-TB None
ERR323045 HR-TB None
ERR323108 HR-TB lineage4 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR1023302 MDR-TB lineage3;La3 None
ERR323085 Sensitive lineage4 None
ERR11465025 Other lineage4.1.1.3 None
ERR1063862 HR-TB None
ERR1023525 HR-TB lineage4 None
ERR1035122 Sensitive None
ERR1035157 Other lineage4.9 None
ERR11465024 Other lineage4.1.1.3 None
ERR1034634 HR-TB None
ERR11465235 Sensitive lineage4.3.4.2.1 None
ERR1063896 Sensitive None
ERR1063859 HR-TB None
ERR1063858 HR-TB None
ERR108471 HR-TB lineage4 None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR3283025 HR-TB None
ERR3283014 HR-TB None
ERR3283021 HR-TB None
ERR3273109 MDR-TB lineage4 None
ERR3283010 Other La1 None
ERR3283027 HR-TB None
ERR3283028 Other None
ERR3283024 Other None
ERR3283030 HR-TB lineage4.9 None
ERR3283032 HR-TB None
ERR3283040 HR-TB None
ERR3283031 HR-TB None
ERR3283041 Other lineage4.9 None
ERR3283036 HR-TB None
ERR3283057 HR-TB lineage4 None
ERR3283047 HR-TB None
ERR3283058 Other lineage4.9 None
ERR3445503 HR-TB None
ERR3797014 Other None
ERR3470647 Other lineage3 None
ERR3797024 Other lineage4.9 None
ERR3797015 HR-TB None
ERR3797019 Other La1.8.1 None
ERR3797043 HR-TB None
ERR3797017 Other None
ERR3797044 Other None
ERR3797047 HR-TB lineage4 None
ERR3797060 Other La1.8.1 None
ERR3797048 HR-TB None
ERR3797067 Other La1.8.1 None
ERR3797058 Other lineage4.9 None
ERR3797061 Other None
ERR3797065 MDR-TB lineage4 None
ERR3797063 HR-TB None
ERR3797068 Other La1.8.1 None
ERR3797069 Other None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR3797073 HR-TB La1.8.1 None
ERR3799304 Other lineage6.1.1 None
ERR3797080 HR-TB lineage4.9 None
ERR3797079 Sensitive lineage4 None
ERR3797064 Sensitive None
ERR3797086 Other lineage4.9 None
ERR3797087 Sensitive lineage4 None
ERR3804169 HR-TB lineage4.1.3 None
ERR3804155 Other lineage4.1.2.1 None
ERR4024991 Other None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR4796254 Sensitive lineage4 None
ERR4407452 Sensitive lineage3 None
ERR4407463 HR-TB None
ERR4769474 HR-TB lineage4 None
ERR405209 Sensitive lineage4 None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR4188247 HR-TB None
ERR473323 HR-TB lineage4.9 None
ERR473332 Other lineage4 None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4796929 Sensitive lineage4 None
ERR4797037 Pre-XDR-TB lineage3.1.2 None
ERR4796577 MDR-TB None
ERR4797184 Sensitive lineage4 None
ERR4797193 HR-TB lineage1.1.2 None
ERR4798504 Other lineage3 None
ERR4797201 Other lineage1.2.2.2 None
ERR4797264 Sensitive None
ERR4797474 Other None
ERR4797588 MDR-TB lineage3 None
ERR4798099 Other None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4798648 HR-TB lineage3.1.2 None
ERR4799171 Pre-XDR-TB lineage4.8 None
ERR4799378 Sensitive lineage4 None
ERR12015083 Other lineage4.8;La3 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4800341 Other lineage3 None
ERR6866639 Other None
ERR4811022 HR-TB None
ERR4811142 MDR-TB None
ERR6198317 Other La1.2 None
ERR6358755 Other lineage4.6.1.1 None
ERR6866022 Other None
ERR4810741 HR-TB None
ERR4811105 HR-TB None
ERR6358991 HR-TB None
ERR6359045 HR-TB None
ERR6359066 HR-TB lineage4 None
ERR245758 Other lineage4.9.1 None
ERR702406 HR-TB None
ERR702404 HR-TB None
ERR736817 HR-TB lineage4.3.4 None
ERR736834 Sensitive lineage4 None
ERR736839 Other None
ERR736835 HR-TB None
ERR176549 Other lineage4.3.4.2.1 None
ERR736865 HR-TB None
ERR736875 HR-TB lineage4 None
ERR736874 HR-TB None
ERR7821163 Other lineage2.2.1 None
ERR7911670 Pre-XDR-TB lineage2.2 None
ERR736848 HR-TB None
ERR736867 HR-TB None
ERR736872 Sensitive lineage4 None
ERR751326 Sensitive lineage4 None
ERR7821185 Sensitive lineage4.1.1.3 None
ERR9117721 HR-TB lineage1.1.2 None
ERR9117709 HR-TB None
ERR9786384 Sensitive lineage4.1.2.1 None
ERR9119500 MDR-TB lineage5.2 None
ERR9786421 Other lineage4.1.2.1 None
ERR9786604 Other None
ERR9786440 Other lineage4.1 None
ERR9786515 Other lineage4.1.2.1 None
ERR9786569 Other lineage4.8 None
ERR9786642 Other lineage4.1.2.1 None
ERR9786617 Other lineage4.1.1 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786619 Sensitive lineage4.8 None
ERR9786627 Other lineage4.1.2.1 None
ERR9786645 Other lineage4.6.2.2 None
ERR9787165 Other lineage6 None
ERR9786671 Other None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR9786682 Other lineage4.1.2.1 None
ERR9786694 Other lineage4.1.2.1 None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR9787014 Other lineage6.1.1 None
ERR9787139 Other lineage6.3.1 None
ERR9787197 Other None