EBG00000313339 - n.1712G>T


Drug resistance types
50 Sensitive 5 RR-TB 88 HR-TB 27 MDR-TB 9 Pre-XDR-TB 4 XDR-TB 161 Other
lineage Counts
lineage Count
lineage4.1.1.1 4
lineage4 4
lineage4.9 105
La2;lineage4.9;lineage9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage4.8 8
lineage4.1.1.3 6
lineage1.2.2.2 1
La3 2
lineage2.2.1 18
lineage1.1.2 1
21
lineage2.1;lineage4.9 10
La3;lineage4.8 1
lineage4.8.1 1
La3;lineage2.1;lineage4.9 2
lineage6.1.1 2
lineage4.6.2.2 3
lineage4.9;lineage6.3 10
lineage2.2.1.1 4
lineage4.1.2.1 15
lineage5.2 2
M.canetti;lineage2.2 2
lineage4.7 1
lineage4.3.2.1 2
lineage1.1.1 2
lineage2.1;lineage4.9;lineage6.3 7
lineage3.1;lineage9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La3;lineage2.1;lineage6.3 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage4.3.3 4
La3;lineage2 1
M.canetti;lineage2.2.2;lineage6.2 2
La1.7;lineage4.9;lineage7 3
La2;lineage4.9 1
lineage2.2 1
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage4.1.2.1.1 1
lineage1;lineage4.9 1
lineage2.2.1;lineage3 1
lineage2.2.2 1
lineage4.9;lineage9 2
La3;lineage4.9 6
La1.8.1 2
La1.7.1;La1.7.X-unk4 1
lineage4.2;lineage4.8.1;lineage4.9 1
La1.7;lineage4.9 6
lineage3 6
lineage4.1.3 2
M.canetti;lineage2.1;lineage4.9 2
lineage4.4.1.2 1
La1.2 2
La3;lineage2.2.1 2
lineage3.1 1
La1.7;lineage3;lineage4.9;lineage7 1
La1.7;lineage4.2 1
La1.2.BCG 1
lineage2.2.2;lineage4 1
lineage4.3.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.2;lineage4.9 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
lineage4.3.4 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2.2.1 1
lineage4.9.1 1
M.canetti;lineage4.9 2
La1.6;La3;lineage4.9 1
lineage4.3.4.2.1 4
lineage3.1.1 1
La1.7.1;lineage4.9 1
lineage4.3.4.1 1
lineage2.1 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La1.7;M.canetti;lineage4.9 1
lineage4.1 1
La1.6;lineage4 1
lineage2.2;lineage4 1
lineage6.1.3 1
La3;lineage2.1;lineage4.9;lineage6.3 3
lineage4.6.1.1 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage6.3.1 1
lineage2.1;lineage6.3 1
lineage4.1.2 1
lineage3.1.2 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La3;lineage3 1
La3;lineage2.2.2 1
lineage2.2.1;lineage6.3 1
La1.7;lineage3.1;lineage4 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 344
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR176793 Other lineage4.1.1.1 None
ERR3273109 HR-TB lineage4 None
ERR176779 HR-TB lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR926159 Sensitive lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR9786619 Sensitive lineage4.8 None
SRR1165699 Other lineage4.9 None
ERR11465025 Other lineage4.1.1.3 None
ERR4797201 Other lineage1.2.2.2 None
ERR2446570 Sensitive lineage4.8 nl
SRR1172728 RR-TB La3 None
SRR12416842 HR-TB lineage4.9 None
ERR4816656 Other lineage4.9 None
SRR6785527 Sensitive lineage2.2.1 None
ERR4797193 HR-TB lineage1.1.2 None
SRR1172234 Other lineage4.9 None
SRR7496509 Other None
ERR736867 Other lineage2.1;lineage4.9 None
ERR12015083 Other La3;lineage4.8 None
ERR3797086 Sensitive lineage4.9 None
SRR12708389 MDR-TB lineage4.8.1 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR3799304 Other lineage6.1.1 None
SRR6044835 Other lineage4.9 None
ERR212125 HR-TB lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR1184294 Other lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR3804155 Other lineage4.1.2.1 None
SRR7131023 Other lineage4.1.2.1 None
ERR9119500 MDR-TB lineage5.2 None
SRR1184381 MDR-TB None
ERR987722 MDR-TB None
SRR28119805 Other lineage4.9 None
ERR245716 Sensitive lineage2.2.1 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR3797087 Sensitive lineage4.9 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR4797474 Sensitive lineage4.9 None
SRR7496523 Other lineage4.7 None
SRR12708396 MDR-TB lineage4.3.2.1 None
ERR9786604 Other None
SRR5341333 Other lineage2.1;lineage4.9 None
SRR21690362 Other lineage1.1.1 None
ERR3275201 Sensitive lineage4.8 nl
ERR502524 HR-TB lineage4.9;lineage6.3 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR926155 Sensitive lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
ERR4796577 HR-TB None
ERR926157 Sensitive lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1196768 MDR-TB None
ERR176651 Other lineage4.9 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR1172310 HR-TB lineage4.9 None
ERR11252736 Other lineage4.9 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR20969677 HR-TB La3;lineage2 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR9786384 Sensitive lineage4.1.2.1 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
ERR550637 MDR-TB lineage4.1.1.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1169194 Other lineage4.9 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
SRR7496517 Other None
ERR323039 HR-TB La2;lineage4.9 None
SRR1196677 Other lineage2.2 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
SRR1173218 Other lineage4.3.3 None
SRR1184312 Other lineage2.2.1 None
ERR4972483 Pre-XDR-TB lineage4.1.2.1.1 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR15368973 Other lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR18910194 HR-TB lineage2.2.2 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR3283030 HR-TB lineage4.9 None
SRR1173384 Other lineage4.9 None
SRR29016901 Other La3;lineage4.9 None
SRR8692887 Other None
ERR3797019 Other La1.8.1 None
ERR926158 Sensitive lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SRR1196546 Other lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR3283044 Other lineage4 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR7535086 Other None
ERR990545 Other lineage3 None
ERR108471 HR-TB lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR4817731 HR-TB lineage4.9 None
ERR926154 Sensitive lineage4.9 None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283010 Sensitive La1.8.1 None
SRR3675549 Other lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR473332 Other lineage4.9 None
SRR5341308 Sensitive lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR6198317 Other La1.2 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
SRR26937107 MDR-TB lineage2.2.1 None
SRR29050859 Other lineage4.9 None
ERR4407452 Other lineage3 None
SRR1184024 RR-TB lineage2.2.1.1 None
SRR1184346 HR-TB lineage3.1 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR23961559 Other La1.7;lineage4.2 None
SRR1180147 Other lineage2.2.1.1 None
SRR29096174 Sensitive La1.7;lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
SRR1915487 Other La1.2.BCG None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3797070 Other lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
SRR28351341 Other lineage4.1.1.1 None
SRR1173118 Other lineage2.2.1 None
SRR6789621 Other lineage4.9 None
SRR29093105 Other lineage2.2.2;lineage4 None
ERR181824 HR-TB lineage4.9 None
ERR3797079 Sensitive lineage4.9 None
ERR502908 HR-TB lineage2.2.1 None
ERR176778 HR-TB lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
ERR3470647 Other lineage3 None
ERR4819422 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR15600376 HR-TB lineage2.2.1.1 None
SRR1173363 Other None
SRR3675572 Other None
ERR13265528 Other lineage4.9;lineage6.3 None
SRR1196566 Other lineage4.9 None
SRR21732980 Other lineage4.3.3 None
SRR25827507 MDR-TB lineage4.1.1.1 None
ERR3806850 HR-TB lineage4.1.2.1 None
SRR6785413 Other lineage2.2.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR22249687 Sensitive lineage4.8 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR736817 HR-TB lineage4.3.4 None
ERR2517514 Sensitive lineage4.8 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR1063896 Sensitive None
ERR2199988 MDR-TB lineage4.1.1.3 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1175074 Other None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
ERR3797069 Other lineage4.9 None
ERR245758 Other lineage4.9.1 None
SRR26399973 Other La3;lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
SRR1173355 Other lineage4.9 None
ERR9786627 Other lineage4.1.2.1 None
ERR4188247 HR-TB lineage4.9 None
SRR5341400 Sensitive lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR736848 Other lineage4.9 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR11466146 Other lineage4.3.4.2.1 None
ERR6359066 HR-TB lineage4.9 None
ERR926160 Sensitive lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
SRR26159043 Other lineage4.9 None
SRR29051077 Other lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
SRR6789626 Other None
SRR10315567 HR-TB lineage2.2.1 None
SRR3675248 Other lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR9786515 Other lineage4.1.2.1 None
SRR1196474 Other lineage3.1.1 None
ERR553132 MDR-TB lineage4.1.2.1 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR11465235 Sensitive lineage4.3.4.2.1 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR926163 Other lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR4800341 Other lineage3 None
ERR4816478 HR-TB lineage4 None
SRR5341453 Other lineage4.9 None
ERR971389 Sensitive lineage4.9 None
SRR28119777 Other lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR702406 Other lineage2.1 None
ERR926164 Other lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
SRR1172817 Other La3 None
SRR1173400 Other lineage4.9 None
SRR1180172 Other lineage2.2.1 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR1034634 HR-TB lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR2229542 Other lineage4.8 None
SRR1183111 HR-TB lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR9786656 Sensitive lineage4.1.2.1 None
SRR23961549 Other La1.2 None
SRR3675311 Other lineage4.9 None
SRR9971112 Other lineage2.2.1 None
SRR1183144 Other lineage2.2.1 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR502912 Other lineage2.2.1 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR3675221 Other lineage4.9 None
SRR25827682 Other None
SRR1172857 Other None
ERR9787197 Other None
ERR234659 Other None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1173153 Other lineage4.9 None
ERR11465024 Other lineage4.1.1.3 None
ERR176549 Other lineage4.3.4.2.1 None
ERR926156 Sensitive lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR1184372 MDR-TB None
SRR1173633 Other lineage4.9 None
ERR926165 Sensitive lineage4.9 None
ERR9786440 Other lineage4.1 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR28351554 Sensitive La1.6;lineage4 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR8692863 Other lineage2.2;lineage4 None
SRR3675232 Other lineage4.1.2.1 None
ERR1063858 HR-TB lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR4407463 HR-TB None
ERR9787165 Other lineage6.1.3 None
ERR4819241 Other lineage4.9 None
SRR1172951 Other lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786569 Other lineage4.8 None
ERR3283040 HR-TB lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1196583 Other lineage4.9 None
ERR3797029 Other lineage4.9 None
SRR29016780 Other lineage4.9 None
SRR5341373 Other lineage4.9 None
SRR1173562 Sensitive lineage4.9 None
ERR9787014 Other lineage6.1.1 None
ERR6358755 Other lineage4.6.1.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR2514327 HR-TB lineage4.8 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
SRR6044875 Sensitive lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR1173788 Sensitive lineage4.9 None
ERR9787139 Other lineage6.3.1 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR550636 MDR-TB lineage4.1.1.3 None
ERR4817896 HR-TB lineage2.2.1 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1172844 Sensitive lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR28119741 Pre-XDR-TB lineage2.2.1 None
SRR9970980 HR-TB lineage4.1.2 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9896144 Other lineage3 None
SRR5341332 Pre-XDR-TB lineage3 None
ERR4797037 Pre-XDR-TB lineage3.1.2 None
ERR926162 Sensitive lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1023302 MDR-TB La3;lineage3 None
SRR5341300 HR-TB lineage4.9 None
SRR3675448 Other lineage4.9 None
ERR13245558 MDR-TB La3;lineage2.2.2 None
ERR11138607 Pre-XDR-TB lineage2.2.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR1035157 Other lineage4.9 None
ERR181887 Other lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR2027263 Other lineage4 None
SRR1173706 Other lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR9786617 Other lineage4.1.1.1 None
ERR4769474 HR-TB lineage4.9 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR3283011 Other La3;lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR867540 MDR-TB lineage2.2.1 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR6458423 HR-TB lineage2.2.1 None
ERR1063862 HR-TB lineage4.9 None