Rv0639 - c.318C>G


Drug resistance types
24 Sensitive 10 RR-TB 73 HR-TB 22 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 62 Other
lineage Counts
lineage Count
La1.7;lineage4.9 7
lineage3 4
lineage4.9;lineage7 4
lineage2.2.1 8
lineage4.9 90
lineage4.3.2.1 2
lineage2.1;lineage4.9 2
La1.7;M.canetti;lineage4.9 5
lineage4.2.1 1
lineage4.3.3 2
La1;lineage4.9 2
lineage4.3.1;lineage4.9;lineage6 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage2.1;lineage4.9;lineage6.3 1
lineage4.2;lineage4.9 3
lineage4.2;lineage4.8.1;lineage4.9 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La3;lineage4.9 8
lineage2.2 4
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage4.8;lineage4.9 2
La1.7.X-unk4;lineage4.9 1
lineage1.1.1 1
La1;lineage2;lineage4.9 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage4 4
lineage4.9;lineage6.1.3 1
M.canetti;lineage4.9 1
La3;lineage4.3.4 1
M.canetti;lineage1 1
lineage4.1.2.1 2
lineage4.9;lineage6.3 2
M.canetti;lineage4.2;lineage4.9 1
lineage2.2.1.2;lineage7 1
La2;lineage4.9 1
La1.7 2
lineage4.9.1 1
lineage2.2.1;lineage4.9 1
M.canetti;lineage4.9;lineage9 1
lineage3.1.2.1;lineage4 1
1
La1.6;lineage4 1
lineage4.5 1
La1.2.BCG 1
lineage2.2.2 1
lineage4.1.2 1
lineage4.8 2
La1.7;lineage3.1;lineage4 1
lineage4.9;lineage9 2
lineage4.3.2;lineage4.9 1
La2;lineage4.9;lineage9 1
lineage4.3.4.1 1
lineage2.2.1.1 2
lineage4.4.1.2 1
lineage1.1.3.1 1
lineage4.4.1.1.1 1
spoligotype Counts
spoligotype Count
None 194
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675501 Other La1.7;lineage4.9 None
ERR4596902 MDR-TB lineage3 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR926154 Sensitive lineage4.9 None
ERR926157 Other lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR1175487 Sensitive lineage4.9 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
ERR4818561 Sensitive lineage4.9 None
ERR124636 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR3675267 Other La1.7;lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR323062 HR-TB lineage4.9 None
ERR2446566 Other lineage4.9 None
SRR3675585 HR-TB lineage4.9 None
ERR926163 Other lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
ERR751326 Other lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR176751 HR-TB lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR12708409 HR-TB lineage4.3.3 None
ERR133825 HR-TB La1;lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR19295647 HR-TB lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1180391 Sensitive lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
ERR4769452 Other lineage4.9 None
SRR6044835 Other lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR1180172 RR-TB lineage2.2.1 None
SRR1183144 RR-TB lineage2.2.1 None
ERR3283021 MDR-TB lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR161037 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
SRR6045359 HR-TB lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR137286 Other lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
SRR6046046 Other lineage4.9 None
ERR702405 HR-TB lineage4.9 None
SRR3675270 Other lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR6046878 Other lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
ERR4798504 RR-TB lineage3 None
ERR926165 Other lineage4.9 None
ERR926156 Other lineage4.9 None
ERR3283031 Other La3;lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR4819314 HR-TB lineage1.1.1 None
ERR736848 Other lineage4.9 None
SRR5153091 HR-TB lineage4.3.3 None
SRR6045548 Other lineage4.9 None
ERR067712 Sensitive lineage4.9 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR14782054 Other lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
SRR5341308 HR-TB lineage4.9 None
ERR3797063 Other La3;lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
SRR15014655 Other M.canetti;lineage1 None
ERR1063846 HR-TB lineage4.9 None
SRR6511621 HR-TB lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR1035122 HR-TB lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR3273109 HR-TB lineage4 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
SRR1183054 Sensitive lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR323039 MDR-TB La2;lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR3283014 Other La3;lineage4.9 None
ERR4830353 HR-TB La1.7 None
SRR12416842 HR-TB lineage4.9 None
SRR6044875 Other lineage4.9 None
ERR4819546 HR-TB lineage3 None
ERR926164 Other lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
ERR11466062 Sensitive lineage4.9.1 None
SRR1180399 Sensitive lineage4.9 None
SRR12708392 Other lineage2.2.1 None
SRR5341467 Other lineage4.9 None
ERR502510 HR-TB lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
ERR736834 HR-TB lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR926155 Other lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR502511 HR-TB lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR6045053 Other lineage4 None
SRR28351455 Other lineage3.1.2.1;lineage4 None
ERR987722 MDR-TB None
SRR28351554 Other La1.6;lineage4 None
ERR752229 Other lineage4.5 None
ERR4797474 Other lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
SRR1180345 Other lineage4.9 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
ERR3283055 HR-TB lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR20969708 HR-TB lineage2.2 None
ERR4817667 HR-TB lineage4.8 None
SRR3675492 Other La1.7;lineage4.9 None
SRR20969731 Other lineage2.2.1 None
ERR387051 RR-TB lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
ERR4799025 Other lineage4.8 None
ERR9119669 MDR-TB lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR1181349 Sensitive lineage4 None
SRR14801749 HR-TB lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR323066 HR-TB lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR926160 Other lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR3283011 Other La3;lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
ERR4814639 HR-TB lineage4.9 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR4799513 HR-TB lineage2.2 None
SRR3675235 HR-TB lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR181744 HR-TB La3;lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR323107 HR-TB lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR1180444 Sensitive lineage4.9 None
SRR1180147 RR-TB lineage2.2.1.1 None
ERR4797184 HR-TB lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
SRR3675222 Other La1.7 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR4815815 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR971389 Other lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
SRR6045795 Other lineage2.2.1 None
SRR1180406 Sensitive lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
SRR5341330 Other lineage4.9 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
SRR6045217 Other lineage4.9 None