Rv1173 - c.774T>C


Drug resistance types
13 Sensitive 6 RR-TB 46 HR-TB 22 MDR-TB 4 Pre-XDR-TB 3 XDR-TB 167 Other
lineage Counts
lineage Count
lineage2.1;lineage4.9 13
lineage4.9 56
M.canetti;lineage4.2;lineage4.9 2
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.8 3
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La3;lineage2.1;lineage4.9 3
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage6.3.1 1
lineage1.1.2 1
M.canetti;lineage2.1;lineage4.9 2
lineage4.7 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La3;lineage1.1.2 1
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage4.6.3;lineage4.9 2
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage2.2 3
lineage2.1;lineage4.9;lineage6.3 11
La3;lineage2.2.2 1
lineage2.2.1;lineage3 1
La3;lineage4.9 7
La1.7;M.canetti;lineage4.9 2
La1.2;La1.8.1 1
La3;lineage2.2.1 1
lineage3 4
lineage4.9;lineage9 3
M.canetti;lineage2.2.2;lineage6.2 2
lineage4.1.1.1 3
19
La2;lineage4.9;lineage9 1
La1;lineage4.9 1
lineage4.1.3 2
lineage4.6.2.2 5
lineage2.2.1 10
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La3;lineage4.8 2
M.canetti;lineage2.1;lineage6.3 1
lineage6.1.1 2
lineage4.1.2.1 9
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.9;lineage6.3 9
lineage4.3.4.2.1 1
lineage4.3.2;lineage4.9 1
M.canetti;lineage4.6.4;lineage4.9 1
La3;lineage2.1;lineage6.3 1
lineage4.5 1
lineage3.1.2.1;lineage3.1.2.2 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2.2.1 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La1.6;La3;lineage4.9 2
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage3.1.2.2 1
La1.7.1;La1.7.X-unk4 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.9 1
lineage1.2.2.2 1
lineage4.3.4.1 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage2.1 3
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
La1.7;lineage4.2 1
La1.2 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage6.1.3 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage4.2;lineage4.9 1
lineage4.6.1.1 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La3;lineage2 1
La1.6;La3;M.canetti;lineage4.2.2 1
lineage2.1;lineage6.3 2
La2;lineage4.9 1
lineage4 2
lineage2.2.1;lineage6.3 1
lineage4.1.1.3 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage2.1;lineage4.1.4;lineage4.9 1
La3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
M.canetti;lineage4.2 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.2 2
lineage4.6.4;lineage4.9 1
lineage4.1;lineage4.8 1
lineage3.1.2.1;lineage4.9 1
La1.2.BCG;La1.8.1 1
lineage2.2.1.2;lineage7 1
spoligotype Counts
spoligotype Count
None 261
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6046540 Other lineage2.1;lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR2514327 HR-TB lineage4.8 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR9787139 Other lineage6.3.1 None
SRR25827687 MDR-TB lineage1.1.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4819932 Other lineage4.7 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
ERR4816585 Other lineage2.2 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR15368973 Other lineage4.9 None
SRR29093099 MDR-TB La3;lineage2.2.2 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR29016901 Other La3;lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR4798504 RR-TB lineage3 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR29051093 Other lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
SRR3675236 Other None
SRR29017461 Other La3;lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR23961542 Other La1;lineage4.9 None
ERR990545 Other lineage3 None
SRR1165699 Other lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR4816466 HR-TB lineage4.9 None
ERR9786711 Sensitive lineage4.6.2.2 None
SRR28119777 Other lineage4.9 None
ERR13267017 Pre-XDR-TB lineage2.2.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR9786611 HR-TB lineage4.1.3 None
SRR3675549 Other lineage4.9 None
SRR7496509 Other None
ERR736867 Other lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR12015083 Other La3;lineage4.8 None
SRR29097026 Other lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR3799304 Other lineage6.1.1 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR28119752 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR1184294 Other lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR7131023 Other lineage4.1.2.1 None
ERR9786843 Other None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR1184381 MDR-TB None
SRR26159047 Other lineage4.6.3;lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR176549 Other lineage4.3.4.2.1 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR9786421 Other lineage4.1.2.1 None
SRR6832787 Sensitive lineage2.2.1 None
ERR4819781 Other lineage2.2.1 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR6045555 Other lineage4.9 None
ERR4818615 Sensitive None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR3439432 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR1063858 HR-TB lineage4.9 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR1172310 HR-TB lineage4.9 None
SRR3675275 Other lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
ERR9787014 Other lineage6.1.1 None
SRR18213713 HR-TB None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR9896144 Other lineage3 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR14782054 Other lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2446566 Other lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR5341330 Other lineage4.9 None
ERR4816999 Other None
SRR29050859 Other lineage4.9 None
SRR26159043 Other lineage4.9 None
SRR29051077 Other lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR6789626 Other None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR4820854 Other lineage4.1.2.1 None
SRR29093909 Other lineage4.9 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR3675524 Other lineage4.9;lineage6.3 None
SRR6045399 Other M.canetti;lineage4.9 None
SRR7535086 Other None
ERR4797201 Other lineage1.2.2.2 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR4812155 Other lineage4.9 None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR12416842 HR-TB lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR176643 Other La3;lineage4.9 None
ERR9117709 Other None
ERR11466499 Other lineage4.3.4.1 None
SRR29096150 Other lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
SRR23961559 Other La1.7;lineage4.2 None
SRR23961549 Other La1.2 None
SRR7496472 Other lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
SRR3675221 Other lineage4.9 None
ERR11252612 Other La3;lineage4.9 None
ERR987722 MDR-TB None
SRR25827682 Other None
SRR1172857 Other None
ERR212033 Other lineage4.9 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786604 Other None
SRR1165667 Other lineage4.9;lineage6.3 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
ERR9787165 Other lineage6.1.3 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1196583 Other lineage4.9 None
ERR11252736 Other lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR4817893 Other La3;lineage4.8 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR3797069 Other lineage4.9 None
SRR18003019 Other lineage2.2.1 None
SRR26399973 Other La3;lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR323039 HR-TB La2;lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR6866410 Sensitive lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
SRR3675446 RR-TB lineage4.9 None
ERR4799025 Other lineage4.8 None
SRR1169249 Other lineage4.9 None
SRR1184312 Other lineage2.2.1 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR2027263 Other lineage4 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR6045219 HR-TB lineage4.9 None
ERR11465665 Other lineage4.1.1.3 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR9786617 Other lineage4.1.1.1 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR28119753 Other lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR1196546 Other lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR3283021 HR-TB lineage4.9 None
ERR3283044 Other lineage4 None
ERR3283032 Other lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4800341 Other lineage3 None
ERR702406 Other lineage2.1 None
SRR29097066 Sensitive lineage4.9 None
ERR1023509 Other lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR1172817 Other La3 None
SRR1173400 Other lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR26159066 Sensitive lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR1723511 HR-TB lineage2.2.1 cn
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR3283018 HR-TB lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR3797070 Other lineage4.9 None
SRR29097037 Other lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
SRR6789621 Other lineage4.9 None
ERR234659 Other None
ERR4814352 Other lineage2.2.1 None
ERR9786671 Other None
SRR12142341 HR-TB lineage2.1 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR1180226 HR-TB lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR3675572 Other None
SRR5341333 Other lineage2.1;lineage4.9 None
SRR3675457 Other lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR3675510 Sensitive La3;lineage4.9 None
SRR29096410 Other lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR4407463 HR-TB None
ERR2514390 Sensitive lineage3.1.2.1;lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR9786569 Other lineage4.8 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None