Rv1173 - c.774T>C
Drug resistance types
27 Sensitive
3 RR-TB
104 HR-TB
12 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
117 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2 | 6 |
| lineage3.1 | 2 |
| lineage2.2.1 | 13 |
| 145 | |
| lineage2 | 3 |
| lineage4.3.4.1 | 1 |
| lineage4.5 | 2 |
| lineage3 | 5 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.9 | 20 |
| lineage4.1.1 | 2 |
| lineage4 | 27 |
| lineage4.3 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.8;La3 | 1 |
| La1.8.1 | 1 |
| lineage4.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.9;lineage3.1.2.1 | 1 |
| lineage4.8 | 2 |
| lineage4.1.2.1 | 9 |
| lineage4.7 | 1 |
| lineage4.6.2.2 | 5 |
| La2 | 1 |
| lineage6.1.1 | 2 |
| lineage4.1.3 | 2 |
| lineage1.2.2.2 | 1 |
| La1.2 | 2 |
| lineage3.1.2 | 1 |
| lineage4.6.1.1 | 2 |
| lineage1.1.2 | 1 |
| lineage4.8;lineage4.1 | 1 |
| lineage6 | 1 |
| lineage6.3.1 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| La3 | 1 |
| lineage2.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 269 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1183049 | Other | lineage2.2 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184294 | HR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1184372 | MDR-TB | None | SRR1184381 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR1196494 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196566 | HR-TB | None | SRR14782405 | HR-TB | None | SRR12142341 | HR-TB | None | SRR12416824 | HR-TB | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR1196768 | MDR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR17832802 | HR-TB | lineage3 | None | SRR15368973 | Other | None | SRR18003019 | Other | lineage2.2.1 | None | SRR19303884 | HR-TB | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR19304036 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR4815604 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | SRR3675465 | HR-TB | None | ERR158583 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675236 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675229 | Other | lineage4 | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675234 | Other | None | SRR3675247 | Other | lineage4.9 | None | ERR176568 | Other | lineage4.3 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | SRR3675311 | Other | None | ERR176643 | HR-TB | None | SRR3675279 | Other | None | ERR176740 | HR-TB | None | SRR3675318 | Other | lineage4.9 | None | SRR3675503 | Sensitive | lineage4.9 | None | SRR3675387 | Sensitive | None | ERR176751 | HR-TB | None | SRR3675510 | Other | None | SRR3675572 | Other | None | SRR3675522 | Other | None | ERR4816999 | Other | None | SRR3675547 | Other | lineage4.9 | None | SRR3675550 | Other | None | ERR212033 | HR-TB | None | ERR2027263 | Other | lineage4 | None | SRR3675553 | Sensitive | lineage4.9 | None | ERR4817060 | RR-TB | None | SRR3675571 | HR-TB | None | ERR4816466 | HR-TB | None | SRR3742665 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | SRR7496472 | Other | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR234659 | HR-TB | None | ERR4818021 | Other | La1.8.1 | None | ERR1035162 | Other | None | ERR2446566 | Other | lineage4.1 | None | ERR4818394 | Other | lineage4.9 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR2514390 | Sensitive | lineage4.9;lineage3.1.2.1 | None | ERR4818615 | Other | None | SRR5341387 | Other | lineage4 | None | SRR5341418 | Other | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR1723511 | HR-TB | lineage2.2.1 | cn | ERR4819781 | Other | lineage2.2.1 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341302 | HR-TB | None | SRR5341323 | Sensitive | lineage4 | None | ERR4819932 | Other | lineage4.7 | None | ERR1023509 | Other | None | SRR5341330 | HR-TB | None | SRR5341333 | HR-TB | None | ERR6359082 | Other | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341467 | Other | lineage4 | None | SRR5341469 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR2693231 | Other | None | ERR2693254 | Other | None | SRR5341470 | HR-TB | None | ERR2693230 | Other | None | ERR2693257 | Other | None | SRR6044790 | HR-TB | None | SRR5535933 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045892 | Sensitive | None | SRR6044855 | Other | lineage4.9 | None | SRR6044838 | Other | lineage4.9 | None | SRR6046066 | HR-TB | None | SRR6045217 | Other | lineage4 | None | SRR6046482 | HR-TB | None | SRR6045399 | Other | None | SRR6046225 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | SRR6046362 | HR-TB | None | SRR6046245 | Other | lineage4.9 | None | SRR6046460 | HR-TB | None | SRR6832787 | RR-TB | lineage2.2.1 | None | SRR6046540 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6511621 | HR-TB | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR6046824 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR6789626 | Other | None | ERR502889 | Other | None | ERR502532 | HR-TB | None | ERR502524 | HR-TB | La2 | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR7496509 | Other | None | ERR1035157 | Other | lineage4.9 | None | ERR323039 | HR-TB | None | ERR323043 | HR-TB | None | ERR067681 | HR-TB | None | SRR7496517 | Other | None | SRR7535086 | Other | None | ERR323053 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR1034652 | Other | None | ERR1035122 | Sensitive | None | ERR1063858 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063859 | HR-TB | None | ERR133986 | HR-TB | None | ERR133825 | Sensitive | lineage4 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283043 | Other | lineage4.9 | None | ERR3283021 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283024 | Other | None | ERR3283027 | HR-TB | None | ERR3439432 | Other | None | ERR3283051 | Other | lineage4.9 | None | ERR3283036 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3283055 | HR-TB | None | ERR3797014 | Other | None | ERR3445503 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797017 | Other | None | ERR3797046 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797044 | Other | None | ERR3797069 | Other | None | ERR3797061 | Other | None | ERR3797071 | Other | lineage4.9 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR400326 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR4769450 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR4407463 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4024991 | Other | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4798099 | Other | None | ERR4797264 | Sensitive | None | ERR4797313 | HR-TB | None | ERR4797474 | Other | None | ERR4798406 | HR-TB | None | ERR4799025 | Pre-XDR-TB | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4798504 | Other | lineage3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4811022 | HR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4800341 | Other | lineage3 | None | ERR4810741 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR4811105 | HR-TB | None | ERR4811030 | Sensitive | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR5336148 | Other | None | ERR6198317 | Other | La1.2 | None | ERR4811493 | HR-TB | None | ERR4812155 | Sensitive | None | ERR6866410 | Sensitive | None | ERR6359045 | HR-TB | None | ERR6866022 | Other | None | ERR6866639 | Other | None | ERR702404 | HR-TB | None | ERR736867 | HR-TB | None | ERR702406 | HR-TB | None | ERR736865 | HR-TB | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR736872 | Sensitive | lineage4 | None | ERR736874 | HR-TB | None | ERR9117709 | HR-TB | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786515 | Other | lineage4.1.2.1 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786569 | Other | lineage4.8 | None | ERR9786604 | Other | None | ERR9787165 | Other | lineage6 | None | ERR9786617 | Other | lineage4.1.1 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786671 | Other | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9786843 | Other | None | ERR9787014 | Other | lineage6.1.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9787197 | Other | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987722 | HR-TB | None | ERR9896144 | Other | lineage3 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | ERR990545 | Other | lineage3 | None | SRR1167384 | Other | lineage4 | None | SRR10808399 | Sensitive | lineage4 | None | SRR1172234 | Other | None | SRR1169306 | Other | None | SRR1169194 | Other | None | SRR1169249 | Other | La3 | None | SRR1173363 | HR-TB | None | SRR1172310 | HR-TB | None | SRR1172728 | MDR-TB | None | SRR1172857 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1172951 | Other | None | SRR1173118 | Other | None | SRR1173400 | Other | None | SRR1173384 | Other | lineage4 | None | SRR1173788 | Other | None | SRR1173484 | Other | lineage4 | None | SRR1173706 | Other | lineage4.9 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173629 | Other | None | SRR1173778 | Other | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1174897 | HR-TB | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None |
|---|
