Rv0667 - c.1725C>G


Drug resistance types
13 Sensitive 17 RR-TB 84 HR-TB 49 MDR-TB 3 Pre-XDR-TB 2 XDR-TB 121 Other
lineage Counts
lineage Count
M.canetti;lineage2.1;lineage4.9 26
lineage4.5 1
lineage2.2.1 17
La2;lineage4.9;lineage9 1
La1.7.1;lineage4.9 1
lineage1.2.1.2.1 1
lineage4.6.2.2 4
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
lineage4.9 47
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage4.4.1.1 3
lineage2.2.1.1 5
lineage4.1.1;lineage4.9 1
lineage4.1.1.1 1
La1.7.1 1
La3 2
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
La1.7;lineage3;lineage4.9;lineage7 1
La1.7;lineage4.9;lineage7 3
La1.7;lineage4.2 1
La1.2 1
M.canetti;lineage4.9 5
M.canetti;lineage2.1;lineage3 1
lineage4.2;lineage4.9 3
20
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.1.1.3 2
lineage4.9;lineage6.3 3
M.canetti;lineage2.2 3
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
La3;lineage4.9 6
La3;M.canetti;lineage2.1;lineage4.9 12
La3;M.canetti;lineage4.8;lineage4.9 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9;lineage6.3 2
La3;M.canetti;lineage4.9 2
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9 9
La3;lineage2.1;lineage4.9 1
M.canetti;lineage2.1;lineage4 1
La3;M.canetti;lineage2.2.1 1
lineage2.2 3
La3;M.canetti;lineage2.1;lineage3.1 1
lineage2.1 3
La2;lineage4.9 1
lineage4.1.2.1 9
lineage4.3.3 3
lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.9;lineage9 2
lineage1.1 1
La1.7;M.canetti;lineage4.9 2
lineage4.3.4 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage3 5
lineage4.3.2 1
M.canetti;lineage4.3.1;lineage4.9 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage1.1.3.2 1
lineage4.2;lineage4.8.1;lineage4.9 2
lineage4.1.2.1.1 1
lineage2.2.2;lineage4 1
lineage6.1.1 2
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage3.1.2.1 1
La1;lineage4.9 1
La1.8.1 1
M.canetti;lineage2.1;lineage6.3 1
lineage4.3.4.1 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage3.1 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1 1
lineage4.6.3;lineage4.9 2
lineage4.3.2;lineage4.9 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
M.canetti;lineage4.2;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.3.4.2.1 2
lineage4.9.1 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage3.1.2.2 1
La1.7.1;La1.7.X-unk4 1
lineage4.6.1 1
lineage4.1 1
lineage4 1
lineage2.1;lineage4.3.2;lineage4.9 1
spoligotype Counts
spoligotype Count
None 289
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
SRR13423544 Other lineage4.5 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR13423649 Sensitive lineage2.2.1 None
ERR7821163 Other lineage2.2.1 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1510066 Other lineage1.2.1.2.1 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR28119777 Other lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1173767 MDR-TB lineage4.4.1.1 None
SRR1181091 Other lineage2.2.1.1 None
SRR6325442 HR-TB lineage4.1.1;lineage4.9 None
SRR6325447 HR-TB lineage4.1.1.1 None
SRR7240492 HR-TB La1.7.1 None
SRR1172817 Other La3 None
SRR1173400 Other lineage4.9 None
SRR1180172 Other lineage2.2.1 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR23961559 Other La1.7;lineage4.2 None
SRR1180147 Other lineage2.2.1.1 None
SRR1183144 Other lineage2.2.1 None
SRR1184294 Other lineage4.9 None
SRR23961549 Other La1.2 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR9786843 Other None
SRR1184381 MDR-TB None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR212001 HR-TB None
SRR1172857 Other None
ERR212033 Other lineage4.9 None
SRR28119805 Other lineage4.9 None
SRR6789621 Other lineage4.9 None
ERR234659 Other None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR11465024 Other lineage4.1.1.3 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR1180226 HR-TB lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR3675243 Other lineage4.9 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR1167384 Other La3;lineage4.9 None
SRR1173363 Other None
SRR1640750 Other None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3283042 Other lineage4.9 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
SRR3675507 Other lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR11252736 Other lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR29772570 Other lineage4.9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR1175074 Other None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
SRR1183049 RR-TB lineage2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR3416776 Other lineage2.1 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR1163221 MDR-TB lineage4.1.2.1 None
SRR1167055 Other lineage4.1.2.1 None
SRR1173218 Other lineage4.3.3 None
SRR1165628 Other La3;lineage4.9 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR1169249 Other lineage4.9 None
SRR6045526 Other lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR2509673 Other lineage2.2.1 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR3077978 Other lineage1.1 None
ERR212123 Other lineage4.9 None
ERR3801503 Sensitive lineage4.6.2.2 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR161039 Sensitive lineage4.3.4 None
SRR29050859 Other lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR4821053 Other lineage3 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR772255 MDR-TB lineage4.3.2 None
ERR161037 Other lineage4.9 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR7821126 Sensitive lineage1.1.3.2 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR4798504 RR-TB lineage3 None
ERR4797588 MDR-TB lineage3 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR29093105 Other lineage2.2.2;lineage4 None
ERR9786711 Sensitive lineage4.6.2.2 None
SRR1196546 Other lineage4.9 None
ERR9787014 Other lineage6.1.1 None
SRR6045399 Other M.canetti;lineage4.9 None
SRR12142341 HR-TB lineage2.2.1 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR2229143 RR-TB lineage4.9 None
SRR12006550 Sensitive None
SRR12416840 MDR-TB lineage4.9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR987729 HR-TB lineage3.1.2.1 None
SRR17832802 HR-TB lineage3 None
SRR23961542 Other La1;lineage4.9 None
SRR7535086 Other None
SRR20969677 HR-TB lineage2.1 None
SRR17567917 RR-TB lineage4.4.1.1 None
SRR1791696 Other La1.8.1 None
ERR4816466 HR-TB lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR18003019 Other lineage2.2.1 None
SRR1172728 RR-TB La3 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR176643 Other La3;lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR28119811 Other lineage2.2.1 None
ERR176751 Other lineage4.9 None
SRR6079962 HR-TB lineage2.2.1.1 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SAMN02414850 Other lineage4.1.2.1 None
SRR29050928 Other lineage4.9 None
ERR502470 RR-TB lineage4.9 None
SRR29126406 Sensitive lineage2.2.1 None
SRR1183111 HR-TB lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
ERR176740 Other lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR4813861 Other lineage4.3.3 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1165584 Other lineage4.1.2.1 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
ERR11252612 Other La3;lineage4.9 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR2514692 Other None
ERR987722 MDR-TB None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1162864 Other lineage4.1.2.1 None
SRR6044815 Other lineage4.9 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
SRR3675487 Other M.canetti;lineage4.9 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1173633 Other lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR1181289 Other lineage2.2.1 None
SRR1184372 MDR-TB None
SRR1173453 Other lineage4.4.1.1 None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1196566 Other lineage4.9 None
SRR21732980 Other lineage4.3.3 None
SRR18289200 Other lineage4.9 None
SRR29096410 Other lineage4.9 None
SRR1172951 Other lineage4.9 None
SRR1180137 Other lineage2.2.1 None
SRR1173778 Other lineage4.9 None
SRR1196768 MDR-TB None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1196583 Other lineage4.9 None
ERR3468607 Other lineage4.9 None
SRR1165506 Other lineage4.1.2.1 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1710057 Other lineage2.1 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR8665994 Other lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR1173355 Other lineage4.9 None
ERR5162090 RR-TB lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR1196677 Other lineage2.2 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1166821 Other lineage4.1.2.1 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675269 RR-TB lineage4.9 None
SRR1184312 Other lineage2.2.1 None
ERR161034 Other lineage4.3.4.2.1 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR176675 Sensitive lineage4.3.4.2.1 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR1063855 Other lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
ERR3468544 Other lineage2.1;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4797201 Other None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3799304 Other lineage6.1.1 None
ERR245758 Other lineage4.9.1 None
ERR4811105 HR-TB None
ERR4810741 HR-TB None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR502912 Other lineage2.2.1 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR502908 HR-TB lineage2.2.1 None
ERR4811142 RR-TB None
ERR6358755 Other lineage4.6.1 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4811075 Other None
ERR4811311 Other None
SRR28119753 Other lineage4.9 None
SRR3675248 Other lineage4.9 None
ERR9786526 Other lineage4.1 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR29093909 Other lineage4.9 None
ERR9786525 Other lineage4 None
ERR3797043 Sensitive lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR6044942 HR-TB lineage4.9 None
ERR8976043 HR-TB lineage2.2 None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR990545 Other lineage3 None