lineage | Count |
---|---|
94 | |
lineage4.1.2.1 | 7 |
lineage4.1.3 | 2 |
lineage4 | 5 |
lineage3 | 1 |
lineage2 | 2 |
lineage4.8 | 2 |
lineage4.1.1 | 2 |
lineage4.6.2.2 | 1 |
lineage6 | 1 |
lineage6.3.1 | 1 |
lineage4.9 | 6 |
lineage4.3.3 | 2 |
lineage2.2.1 | 5 |
lineage3.1 | 2 |
lineage4.3.4.1 | 1 |
lineage4.5 | 2 |
lineage6.3;lineage2.2.1 | 1 |
lineage4.4.1.1 | 1 |
lineage2.2 | 1 |
La1.8.1 | 1 |
lineage4;lineage1.1 | 1 |
La2 | 1 |
lineage4.7 | 1 |
spoligotype | Count |
---|---|
None | 143 |
ID | Drug resistance | Lineage | Country iso2 | ERR3797017 | Other | None | ERR3797014 | Other | None | ERR3797061 | Other | None | ERR3797044 | Other | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3797069 | Other | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4407463 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR4800341 | Other | lineage3 | None | ERR4798406 | HR-TB | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR5336148 | Other | None | ERR4811142 | MDR-TB | None | ERR9117709 | HR-TB | None | ERR702404 | HR-TB | None | ERR736867 | HR-TB | None | ERR702406 | HR-TB | None | ERR736874 | HR-TB | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786569 | Other | lineage4.8 | None | ERR9786604 | Other | None | ERR9786617 | Other | lineage4.1.1 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786671 | Other | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9787165 | Other | lineage6 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR1169194 | Other | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9787197 | Other | None | SRR1172728 | MDR-TB | None | SRR1172234 | Other | None | SRR1172857 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1172951 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173363 | HR-TB | None | SRR1173400 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173629 | Other | None | SRR1173384 | Other | lineage4 | None | SRR1173562 | HR-TB | lineage4 | None | SRR1175049 | RR-TB | None | SRR1173778 | Other | None | SRR1173788 | Other | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1175074 | MDR-TB | None | SRR1184294 | HR-TB | None | SRR1184372 | MDR-TB | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184381 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1184388 | Other | None | SRR1196566 | HR-TB | None | SRR1196546 | HR-TB | None | SRR1196494 | MDR-TB | None | SRR1196768 | MDR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR12142341 | HR-TB | None | SRR12416824 | HR-TB | None | SRR15368973 | Other | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR1640750 | HR-TB | None | SRR19303884 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | ERR11081258 | Other | lineage4.8 | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR26159043 | Other | lineage4.9 | None | ERR2179785 | Sensitive | lineage4.5 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR4815604 | HR-TB | None | ERR2027263 | Other | lineage4 | None | ERR158583 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675234 | Other | None | SRR3675311 | Other | None | SRR3675502 | Other | None | ERR4816999 | Other | None | ERR176793 | Other | lineage4.1.1 | None | SRR3675465 | HR-TB | None | SRR3675236 | HR-TB | None | ERR4816466 | HR-TB | None | ERR212001 | HR-TB | None | SRR3675550 | Other | None | SRR3675574 | HR-TB | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR3742665 | HR-TB | None | ERR502912 | Other | lineage2.2.1 | None | ERR4816585 | Other | lineage2.2 | None | ERR4816656 | HR-TB | None | SRR5341418 | Other | None | ERR4818021 | Other | La1.8.1 | None | SRR5007188 | Other | lineage4 | None | ERR4818615 | Other | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR234659 | HR-TB | None | ERR4819322 | Other | lineage4;lineage1.1 | None | SRR5341302 | HR-TB | None | ERR4819781 | Other | lineage2.2.1 | None | SRR6045450 | Other | lineage4.9 | None | SRR5341333 | HR-TB | None | ERR2693231 | Other | None | SRR6044790 | HR-TB | None | ERR2693254 | Other | None | ERR2693257 | Other | None | SRR6045526 | HR-TB | None | ERR2693230 | Other | None | SRR6046362 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6045399 | Other | None | SRR6045327 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046482 | HR-TB | None | ERR502524 | HR-TB | La2 | None | SRR6046540 | HR-TB | None | SRR6789626 | Other | None | SRR6046824 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR067681 | HR-TB | None | SRR7496509 | Other | None | ERR502532 | HR-TB | None | ERR502889 | Other | None | SRR7496517 | Other | None | SRR7496523 | Other | lineage4.7 | None | ERR323043 | HR-TB | None | ERR1034652 | Other | None | ERR3283027 | HR-TB | None | ERR133986 | HR-TB | None | ERR3283024 | Other | None | ERR1035157 | Other | lineage4.9 | None | ERR3283036 | HR-TB | None | ERR3283043 | Other | lineage4.9 | None | ERR3439432 | Other | None |
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