Rv0407 - c.765A>C
Drug resistance types
53 Sensitive
3 RR-TB
199 HR-TB
13 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
107 Other
lineage Counts
| lineage | Count |
|---|---|
| 189 | |
| lineage4.9 | 59 |
| lineage4.1.2.1 | 14 |
| lineage2.2.1 | 16 |
| lineage4 | 40 |
| lineage3.1 | 4 |
| lineage1.1 | 1 |
| lineage4.8 | 2 |
| lineage4.3.3 | 3 |
| lineage4.2.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.7 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.3.4.1 | 2 |
| lineage2.2 | 6 |
| La1 | 2 |
| La1.8.1 | 3 |
| lineage4.1.3 | 2 |
| lineage4;lineage3.1 | 1 |
| La1.2 | 1 |
| lineage2 | 4 |
| lineage3 | 2 |
| lineage4.3.2 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage1.1.2 | 1 |
| lineage6 | 1 |
| lineage6.3.1 | 1 |
| lineage2.2.1.2 | 1 |
| lineage4.4.1.1 | 3 |
| lineage2.2.1.1 | 3 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.5 | 1 |
| lineage9;lineage3.1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.1 | 1 |
| lineage4.3.4 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage2.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.8;La3 | 1 |
| lineage4;lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 381 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045327 | HR-TB | None | SRR6045399 | Other | None | SRR6325444 | HR-TB | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046305 | Other | lineage4.9 | None | ERR2517489 | Sensitive | lineage4.1.2.1 | nl | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046362 | HR-TB | None | SRR6046492 | Other | None | SRR6046460 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046878 | HR-TB | lineage4 | None | SRR6325447 | HR-TB | None | SRR6046824 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR3077978 | Other | lineage1.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6325442 | HR-TB | None | ERR323037 | HR-TB | lineage4 | None | ERR4831117 | HR-TB | None | ERR485006 | HR-TB | lineage4.9 | None | ERR294248 | HR-TB | None | SRR6896147 | Sensitive | lineage4.8 | None | SRR6831950 | Other | lineage4.3.3 | None | SRR6785268 | Sensitive | lineage4.2.1 | None | ERR5311081 | HR-TB | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | ERR502532 | HR-TB | None | SRR6789626 | Other | None | ERR294266 | HR-TB | None | ERR323036 | HR-TB | None | ERR502889 | Other | None | ERR5311099 | HR-TB | None | ERR5311090 | HR-TB | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR323038 | HR-TB | None | SRR7496509 | Other | None | SRR8217918 | HR-TB | None | ERR323043 | HR-TB | None | SRR7496523 | Other | lineage4.7 | None | SRR7496517 | Other | None | SRR7535086 | Other | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323041 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323045 | HR-TB | None | ERR323055 | HR-TB | None | ERR323063 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR067681 | HR-TB | None | ERR1034652 | Other | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1023525 | HR-TB | lineage4 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR1035157 | Other | lineage4.9 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063862 | HR-TB | None | ERR1063855 | Other | lineage4 | None | ERR1063857 | HR-TB | None | ERR3283021 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR133986 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR3283017 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283025 | HR-TB | None | ERR3283028 | Other | None | ERR3283024 | Other | None | ERR3283027 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283051 | Other | lineage4.9 | None | ERR3283040 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3439432 | Other | None | ERR3283058 | Other | lineage4.9 | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3468544 | HR-TB | None | ERR3445503 | HR-TB | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR3797015 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797014 | Other | None | ERR3797048 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797044 | Other | None | ERR3797017 | Other | None | ERR3797063 | HR-TB | None | ERR3797060 | Other | La1.8.1 | None | ERR3797061 | Other | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797069 | Other | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR387051 | HR-TB | None | ERR3797083 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR3797087 | Sensitive | lineage4 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR403298 | HR-TB | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR5336148 | Other | None | ERR4188247 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR4407463 | HR-TB | None | ERR4188350 | HR-TB | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769452 | HR-TB | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR4796929 | Sensitive | lineage4 | None | ERR4769521 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4798262 | HR-TB | La1 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4798406 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4800341 | Other | lineage3 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4810741 | HR-TB | None | ERR4811493 | HR-TB | None | ERR4811030 | Sensitive | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6358837 | HR-TB | None | ERR6358991 | HR-TB | None | ERR6866807 | HR-TB | lineage4 | None | ERR6359045 | HR-TB | None | ERR702406 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR736837 | Other | lineage4.9 | None | ERR736874 | HR-TB | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736835 | HR-TB | None | ERR736848 | HR-TB | None | ERR736867 | HR-TB | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9117709 | HR-TB | None | ERR8976043 | HR-TB | None | ERR9119669 | HR-TB | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9787197 | Other | None | ERR9786671 | Other | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9787165 | Other | lineage6 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1169194 | Other | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1172234 | Other | None | SRR1172728 | MDR-TB | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172817 | HR-TB | None | SRR1172857 | MDR-TB | None | SRR1172951 | Other | None | SRR1173118 | Other | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1173330 | Pre-XDR-TB | lineage4 | None | SRR1173363 | HR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1173400 | Other | None | SRR1173629 | Other | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1175049 | RR-TB | None | SRR1173778 | Other | None | SRR1173788 | Other | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181328 | Other | lineage2.2.1 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184294 | HR-TB | None | SRR1184381 | MDR-TB | None | SRR1184372 | MDR-TB | None | SRR1184388 | Other | None | SRR1184380 | HR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196566 | HR-TB | None | SRR1196494 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR12142341 | HR-TB | None | SRR1196768 | MDR-TB | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR19304036 | HR-TB | None | SRR13861372 | Other | lineage4.9 | None | SRR13861434 | RR-TB | lineage4.9 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19303884 | HR-TB | None | SRR12416824 | HR-TB | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR14781867 | Sensitive | lineage4.8 | None | SRR14782405 | HR-TB | None | SRR15368973 | Other | None | ERR1035239 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | ERR176778 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | SRR6325445 | HR-TB | None | SRR20969731 | Other | lineage2.2.1 | None | SRR8692905 | HR-TB | None | ERR4815604 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR176779 | HR-TB | None | SRR3675502 | Other | None | SRR3675465 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675482 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR161033 | HR-TB | None | SRR3675486 | HR-TB | None | ERR158583 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | ERR181744 | HR-TB | None | SRR3675221 | HR-TB | None | ERR181887 | HR-TB | None | SRR3675234 | Other | None | SRR3675280 | HR-TB | lineage4.9 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675270 | HR-TB | None | SRR3675311 | Other | None | ERR176651 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675383 | HR-TB | None | SRR3675456 | HR-TB | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR4816999 | Other | None | SRR3675510 | Other | None | SRR3675545 | HR-TB | None | ERR2027263 | Other | lineage4 | None | SRR3675558 | HR-TB | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR212034 | HR-TB | None | SRR3675550 | Other | None | SRR3675555 | HR-TB | None | ERR4817060 | RR-TB | None | ERR4816585 | Other | lineage2.2 | None | ERR212123 | Other | None | ERR212138 | HR-TB | lineage4 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR3742665 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | SRR3675574 | HR-TB | None | ERR212121 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4816656 | HR-TB | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR3275215 | Other | lineage4.1.2.1 | nl | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR234659 | HR-TB | None | ERR4818021 | Other | La1.8.1 | None | ERR1035162 | Other | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR4818929 | HR-TB | None | ERR4818394 | Other | lineage4.9 | None | ERR4819462 | Other | lineage4 | None | ERR4818536 | Other | lineage4.9 | None | ERR2509673 | Other | lineage2.2.1 | None | SRR5007188 | Other | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | ERR4819280 | Sensitive | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341418 | Other | None | SRR5341432 | HR-TB | lineage4 | None | ERR1035138 | MDR-TB | None | SRR5341313 | HR-TB | None | SRR5341293 | HR-TB | lineage4 | None | ERR2514692 | Other | None | SRR5341302 | HR-TB | None | ERR4819932 | Other | lineage4.7 | None | SRR5341315 | Sensitive | None | ERR2693230 | Other | None | ERR2446563 | Other | lineage2.2.1 | nl | ERR4821053 | Other | lineage3 | None | ERR2693239 | HR-TB | None | SRR5341333 | HR-TB | None | ERR6359082 | Other | lineage4.9 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR2693231 | Other | None | ERR2693257 | Other | None | ERR2693254 | Other | None | SRR6045526 | HR-TB | None | ERR278594 | HR-TB | None | SRR5535933 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | SRR6045555 | HR-TB | None | ERR2693227 | Other | lineage4.9 | None | ERR2446118 | Other | lineage4.1.2.1 | nl | ERR2693232 | Other | lineage4.9 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6046133 | HR-TB | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044790 | HR-TB | None | SRR6046046 | Other | None | SRR6045952 | HR-TB | None | SRR6045053 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6045233 | HR-TB | None | SRR6044876 | Sensitive | lineage4 | None | SRR6046066 | HR-TB | None |
|---|
