EBG00000313339 - n.1356G>A
Drug resistance types
29 Sensitive
2 RR-TB
26 HR-TB
14 MDR-TB
2 Pre-XDR-TB
2 XDR-TB
47 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 6 |
| lineage4.9 | 15 |
| lineage2.2.1 | 23 |
| lineage6.1.1 | 2 |
| lineage4.1.2.1 | 4 |
| lineage2.1;lineage6.3 | 1 |
| lineage2.2.1;lineage4.2.2.2 | 1 |
| La1.7;lineage4.9 | 2 |
| La2;lineage4.9 | 1 |
| lineage3 | 3 |
| M.canetti;lineage4.9 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.3.3 | 1 |
| lineage4.2.1 | 1 |
| lineage4 | 3 |
| La2;lineage4.9;lineage9 | 1 |
| lineage4.1.3 | 2 |
| lineage4.3.4.1 | 1 |
| La3;lineage4.9 | 5 |
| lineage2.1;lineage4.9 | 3 |
| 6 | |
| lineage4.8.1 | 1 |
| La1.7;lineage4.2 | 1 |
| lineage4.1;lineage4.8 | 2 |
| lineage1.2.1.2 | 1 |
| lineage4.7 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1.1.3 | 3 |
| lineage2.2 | 1 |
| lineage4.9.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage4.6.1.2 | 1 |
| lineage2.2.1;lineage4.8 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4.9;lineage9 | 2 |
| lineage4.9;lineage6.3 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| M.canetti;lineage2.2 | 2 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage2.2.1.1 | 1 |
| La1.7 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.3.2.1 | 1 |
| La1.2 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1;lineage4.2.1;lineage4.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 122 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR12015084 | Other | lineage4.8 | None | SRR1172310 | HR-TB | lineage4.9 | None | SRR14782188 | Sensitive | lineage2.2.1 | None | ERR9787014 | Other | lineage6.1.1 | None | SRR29772570 | Other | lineage4.9 | None | ERR11465597 | Sensitive | lineage4.1.2.1 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR11050093 | Sensitive | lineage2.2.1;lineage4.2.2.2 | None | SRR14782055 | Sensitive | lineage2.2.1 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR9896144 | Other | lineage3 | None | SRR14782087 | Sensitive | lineage2.2.1 | None | SRR3675448 | Other | lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | ERR11050110 | Sensitive | lineage2.2.1 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR14801363 | Sensitive | lineage2.2.1 | None | ERR1213875 | Sensitive | lineage4.3.3 | de | SRR6785268 | Sensitive | lineage4.2.1 | None | ERR3283044 | Other | lineage4 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | ERR176643 | Other | La3;lineage4.9 | None | SRR14782640 | Sensitive | lineage2.2.1 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR7496509 | Other | None | SRR12708389 | MDR-TB | lineage4.8.1 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR3675311 | Other | lineage4.9 | None | ERR3797070 | Other | lineage4.9 | None | SRR22048440 | Sensitive | lineage2.2.1 | None | SRR14782384 | Sensitive | lineage2.2.1 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR9786525 | Other | lineage4.1;lineage4.8 | None | SRR12006550 | Sensitive | lineage1.2.1.2 | None | SRR7496523 | Other | lineage4.7 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR14802093 | Sensitive | lineage2.2.1 | None | SRR14802016 | Sensitive | lineage2.2.1 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR1183049 | RR-TB | lineage2.2 | None | ERR245758 | Other | lineage4.9.1 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR2124083 | HR-TB | lineage4.6.1.2 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | SRR1165628 | Other | La3;lineage4.9 | None | SRR14801415 | Sensitive | lineage2.2.1;lineage4.8 | None | ERR9786444 | Sensitive | lineage4.8 | None | SRR1169306 | Other | La3;lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR2600607 | Sensitive | lineage2.2.1 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR4799171 | Pre-XDR-TB | lineage4.8 | None | ERR11466044 | Other | lineage4.1.1.3 | None | ERR9786619 | Sensitive | lineage4.8 | None | ERR990545 | Other | lineage3 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR3675549 | Other | lineage4.9 | None | ERR176751 | Other | lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR5153927 | Sensitive | lineage2.2.1 | None | SRR14781986 | Sensitive | lineage2.2.1 | None | SRR1183144 | Other | lineage2.2.1 | None | ERR9786843 | Other | None | ERR987722 | MDR-TB | None | ERR212001 | HR-TB | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR15600376 | HR-TB | lineage2.2.1.1 | None | SRR1167384 | Other | La3;lineage4.9 | None | SRR3675572 | Other | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR3675222 | Other | La1.7 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | ERR12015086 | RR-TB | lineage4.8 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR1035294 | MDR-TB | lineage4.1.2.1 | br | SRR1169249 | Other | lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR2027263 | Other | lineage4 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | SRR6789626 | Other | None | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR14782241 | Sensitive | lineage2.2.1 | None | SRR6785263 | Sensitive | lineage2.2.1 | None | SRR28498489 | Sensitive | lineage2.2.1 | None | ERR11049020 | Other | lineage4.8 | None | SRR14782258 | Sensitive | lineage2.2.1 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR6198317 | Other | La1.2 | None | ERR3799304 | Other | lineage6.1.1 | None | SRR14802153 | Sensitive | lineage2.2.1 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | ERR11252612 | Other | La3;lineage4.9 | None | ERR212033 | Other | lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR14782086 | MDR-TB | lineage2.2.1;lineage4.2.1;lineage4.8 | None | SRR10379923 | Sensitive | lineage2.2.1 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
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