Rv2245 - c.720C>T

Note: the variant has been searched for in a non-representative convenience dataset of samples from the ENA. This sampleset may contain overrepresentation in certain categories such as geographic source, drug resistance type and lineage. Interpretation of variant frequencies should be performed cautiously with this in mind.
Drug resistance types
7 Sensitive 1 RR-TB 20 HR-TB 7 MDR-TB 0 Pre-XDR-TB 2 XDR-TB 32 Other
lineage Counts
lineage Count
La3;lineage2.1;lineage4.9 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
La1.7;lineage4.9;lineage7 3
lineage2.2 2
lineage4 2
lineage4.3.1;lineage4.9;lineage6 1
lineage4.9 24
lineage4.3.4.2.1 1
M.canetti;lineage4.9 1
lineage4.1 1
lineage4.6.2.2 2
lineage4.3.4.1 1
La3;lineage4.9 6
lineage2.2.1 2
lineage2.1;lineage4.9;lineage6.3 1
La1.7;lineage3;lineage4.9;lineage7 1
La1;lineage4.9 1
M.canetti;lineage2.2 2
lineage4.9;lineage7 3
lineage2.1;lineage4.9;lineage7 1
lineage4.9;lineage6.1.3 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage4.1.1.3 2
lineage4.3.4 1
lineage4.1.2.1 1
M.canetti;lineage2.1;lineage4.9 1
3
spoligotype Counts
spoligotype Count
None 69
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
SRR1183049 RR-TB lineage2.2 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR6045053 Other lineage4 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR1169249 Other lineage4.9 None
SRR6045526 Other lineage4.9 None
ERR161034 Other lineage4.3.4.2.1 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR9786526 Other lineage4.1 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR176643 Other La3;lineage4.9 None
SRR6046382 Sensitive lineage2.2.1 None
ERR4816656 Other lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4799513 HR-TB lineage2.2 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
ERR11252612 Other La3;lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR3675539 HR-TB lineage4.9;lineage7 None
ERR4819422 HR-TB lineage4.9 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR1167384 Other La3;lineage4.9 None
SRR6046878 Other lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR1180137 Other lineage2.2.1 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR550636 MDR-TB lineage4.1.1.3 None
SRR6046046 Other lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR6045548 Sensitive lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
SRR5341330 Other lineage4.9 None
ERR212123 Other lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
ERR161039 Sensitive lineage4.3.4 None
ERR4769450 Other lineage4.9 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR161037 Other lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR3675248 Other lineage4.9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR9786525 Other lineage4 None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR176751 Other lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR3797046 HR-TB lineage4.9 None
ERR4769452 Other lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR9786843 Other None
ERR2514692 Other None
ERR212001 HR-TB None
ERR212033 Other lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
SRR3675270 Other lineage4.9 None