Rv3246c - c.481C>T
Drug resistance types
7 Sensitive
6 RR-TB
16 HR-TB
5 MDR-TB
2 Pre-XDR-TB
2 XDR-TB
33 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti;lineage2.1;lineage4.9 | 2 |
| La3 | 2 |
| lineage4.9 | 9 |
| lineage2.1;lineage4.9;lineage6.3 | 5 |
| lineage4.9;lineage6.3 | 1 |
| lineage2.2.1 | 5 |
| M.canetti;lineage2.2 | 2 |
| La3;lineage4.9 | 3 |
| lineage2.1;lineage4.9 | 5 |
| La3;lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1 | 3 |
| lineage1.2.1.2.1 | 11 |
| lineage3.1 | 1 |
| 3 | |
| La3;lineage2 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage2.2 | 1 |
| lineage3 | 1 |
| lineage4.3.4.1 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.1.2 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4.3.3 | 1 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 71 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1172817 | Other | La3 | None | SRR12416840 | MDR-TB | lineage4.9 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | ERR502912 | Other | lineage2.2.1 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR1167384 | Other | La3;lineage4.9 | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | SRR3675508 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR1710057 | Other | lineage2.1 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3416776 | Other | lineage2.1 | None | SRR10808557 | Sensitive | lineage1.2.1.2.1 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | SRR1196546 | Other | lineage4.9 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1172728 | RR-TB | La3 | None | ERR176643 | Other | La3;lineage4.9 | None | SRR1184346 | HR-TB | lineage3.1 | None | ERR7821163 | Other | lineage2.2.1 | None | SRR14519832 | Sensitive | lineage1.2.1.2.1 | None | SRR1184381 | MDR-TB | None | SRR6789621 | Other | lineage4.9 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR12142341 | HR-TB | lineage2.1 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR4814590 | RR-TB | lineage1.2.1.2.1 | None | SRR1172951 | Other | lineage4.9 | None | SRR1196583 | Other | lineage4.9 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | ERR4821003 | RR-TB | lineage1.2.1.2.1 | None | SRR18003019 | Other | lineage2.2.1 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1196677 | Other | lineage2.2 | None | SRR1169306 | Other | La3;lineage4.9 | None | ERR4821566 | RR-TB | lineage1.2.1.2.1 | None | ERR7902712 | Sensitive | lineage1.2.1.2.1 | None | SRR6480334 | Sensitive | lineage1.2.1.2.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR4817371 | RR-TB | lineage1.2.1.2.1 | gb | ERR4800341 | Other | lineage3 | None | ERR10465940 | Sensitive | lineage1.2.1.2.1 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR1173400 | Other | lineage4.9 | None | SRR1184294 | Other | lineage4.9 | None | SRR1172857 | Other | None | SRR1184372 | MDR-TB | None | SRR12006550 | Sensitive | lineage1.2.1.2 | None | ERR4818347 | Other | lineage4.1.2 | None | SRR1173778 | Other | lineage4.9 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | SRR21732110 | HR-TB | lineage1.2.1.2.1 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | SRR1184312 | Other | lineage2.2.1 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR15368973 | Other | lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR10808978 | Sensitive | lineage1.2.1.2.1 | None |
|---|
