Rv0407 - c.567T>C
Drug resistance types
71 Sensitive
3 RR-TB
160 HR-TB
21 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
75 Other
lineage Counts
| lineage | Count |
|---|---|
| 156 | |
| lineage4 | 46 |
| lineage4.9 | 22 |
| lineage2 | 3 |
| La1 | 1 |
| lineage3 | 3 |
| lineage1.1.2 | 2 |
| lineage2.2 | 5 |
| lineage4.6 | 40 |
| lineage4.6.1.1 | 3 |
| lineage1.1.3.2 | 1 |
| lineage4.3.2 | 1 |
| lineage5.2 | 2 |
| lineage4.1.2.1 | 11 |
| lineage4.8 | 4 |
| lineage4.1.3 | 2 |
| lineage4.6.2.2 | 1 |
| lineage6.3.1 | 1 |
| lineage2.2.1 | 11 |
| lineage4.3.3 | 2 |
| lineage4.5 | 2 |
| lineage4.3.4.1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.1 | 1 |
| lineage4.3.4 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage4.3 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4;lineage1.1.2 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4;lineage1.1 | 1 |
| lineage4.7 | 1 |
| lineage4.2.1 | 1 |
| lineage3.1 | 2 |
| lineage1.1 | 1 |
| La2 | 1 |
| lineage4.1.2 | 1 |
| La1.8.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 338 |
Geographic prevalence
Country level data for this variant is available for 13 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR5336148 | Other | None | ERR4188350 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR4407463 | HR-TB | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769452 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4798262 | HR-TB | La1 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4810741 | HR-TB | None | ERR4799025 | Pre-XDR-TB | None | ERR4800341 | Other | lineage3 | None | ERR4798406 | HR-TB | None | ERR4798586 | Sensitive | lineage1.1.2 | in | ERR4799513 | HR-TB | lineage2.2 | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR4811427 | Sensitive | lineage4.6 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6358837 | HR-TB | None | ERR7821123 | Other | lineage1.1.3.2 | None | ERR6358991 | HR-TB | None | ERR6359045 | HR-TB | None | ERR736874 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR702404 | HR-TB | None | ERR702406 | HR-TB | None | ERR736834 | Sensitive | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR736867 | HR-TB | None | ERR751326 | Sensitive | lineage4 | None | ERR9119635 | MDR-TB | lineage4.6 | None | ERR11050031 | Sensitive | lineage4.6 | None | ERR8976043 | HR-TB | None | ERR9117709 | HR-TB | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9119479 | MDR-TB | lineage4.6 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9119547 | Pre-XDR-TB | lineage4.6 | None | SRR10808805 | Sensitive | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9892004 | Sensitive | lineage4.6 | None | ERR9786569 | Other | lineage4.8 | None | ERR9786604 | Other | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786671 | Other | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR11050126 | Sensitive | lineage4.6 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9787197 | Other | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1173778 | Other | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1172951 | Other | None | SRR1173153 | HR-TB | None | SRR1167384 | Other | lineage4 | None | SRR1169194 | Other | None | SRR1172234 | Other | None | SRR1172857 | MDR-TB | None | SRR1173118 | Other | None | SRR1173400 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173629 | Other | None | SRR1173788 | Other | None | SRR1175049 | RR-TB | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1184294 | HR-TB | None | SRR1196494 | MDR-TB | None | SRR1184381 | MDR-TB | None | SRR1184388 | Other | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184372 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR1196566 | HR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196768 | MDR-TB | None | SRR12142341 | HR-TB | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR13861151 | RR-TB | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR1640750 | HR-TB | None | SRR1184380 | HR-TB | None | SRR12416824 | HR-TB | None | SRR13423544 | Other | lineage4.5 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR13861413 | Sensitive | lineage4.9 | None | SRR15368973 | Other | None | SRR18003019 | Other | lineage2.2.1 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None | ERR11068389 | Sensitive | lineage4.6 | None | SRR2101442 | Sensitive | lineage4.8 | None | SRR20969677 | HR-TB | lineage2 | None | SRR2100939 | Sensitive | lineage4.6 | None | ERR11081215 | MDR-TB | lineage4.6 | None | ERR4815604 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR158583 | HR-TB | None | SRR6325445 | HR-TB | None | SRR3675465 | HR-TB | None | ERR1035239 | HR-TB | None | SRR3675482 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675488 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675486 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675501 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | ERR181744 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675222 | Other | None | ERR176568 | Other | lineage4.3 | None | SRR3675236 | HR-TB | None | SRR3675270 | HR-TB | None | ERR4817037 | Other | lineage4.9 | None | SRR3675456 | HR-TB | None | ERR176751 | HR-TB | None | ERR4816999 | Other | None | ERR176643 | HR-TB | None | SRR3675311 | Other | None | SRR3675503 | Sensitive | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | SRR3675545 | HR-TB | None | ERR4816151 | Other | lineage4.8 | None | SRR3675555 | HR-TB | None | ERR212001 | HR-TB | None | SRR3675550 | Other | None | ERR212033 | HR-TB | None | ERR212034 | HR-TB | None | ERR4816550 | Sensitive | lineage4.9 | None | ERR212121 | HR-TB | None | SRR3675558 | HR-TB | None | ERR3275980 | HR-TB | lineage4.6 | nl | SRR3675574 | HR-TB | None | ERR4816466 | HR-TB | None | ERR2145486 | Sensitive | lineage4.6 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | ERR4816585 | Other | lineage2.2 | None | ERR4816646 | Sensitive | lineage4.6 | gb | ERR3276058 | Sensitive | lineage4.6 | nl | SRR3742665 | HR-TB | None | ERR4816656 | HR-TB | None | ERR4816699 | Other | lineage4.6 | None | ERR4818772 | Other | lineage4.6 | gb | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR4817877 | Sensitive | lineage4.6 | gb | ERR4818252 | Other | lineage4.1.1.2 | None | ERR234659 | HR-TB | None | ERR4818394 | Other | lineage4.9 | None | ERR4818929 | HR-TB | None | ERR2503562 | HR-TB | lineage4.6 | None | ERR4818536 | Other | lineage4.9 | None | ERR2509673 | Other | lineage2.2.1 | None | ERR1035138 | MDR-TB | None | ERR2513512 | Sensitive | lineage4.6 | None | ERR553160 | HR-TB | lineage4.6 | de | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR4818615 | Other | None | ERR4819322 | Other | lineage4;lineage1.1 | None | ERR4819462 | Other | lineage4 | None | SRR5341418 | Other | None | ERR4819487 | Sensitive | lineage4.6 | None | SRR5341432 | HR-TB | lineage4 | None | ERR4821892 | Sensitive | lineage4.6 | gb | ERR4819781 | Other | lineage2.2.1 | None | ERR4819790 | Other | lineage4.6 | gb | SRR5341302 | HR-TB | None | SRR5341315 | Sensitive | None | SRR5341330 | HR-TB | None | ERR2693239 | HR-TB | None | SRR6045503 | HR-TB | None | ERR278594 | HR-TB | None | ERR2514692 | Other | None | ERR4820546 | Sensitive | lineage4.6 | None | ERR4819895 | Sensitive | lineage4.6 | gb | SRR5341313 | HR-TB | None | ERR4819932 | Other | lineage4.7 | None | SRR5341333 | HR-TB | None | ERR6359082 | Other | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR6046090 | HR-TB | lineage4.6 | gb | SRR6045526 | HR-TB | None | SRR5535837 | Sensitive | lineage4.6 | None | ERR278552 | Sensitive | lineage4.6 | None | SRR6045053 | Other | None | ERR2693227 | Other | lineage4.9 | None | ERR4822046 | Sensitive | lineage4.6 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR6044790 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6045217 | Other | lineage4 | None | SRR6045327 | HR-TB | None | SRR6046046 | Other | None | SRR6046066 | HR-TB | None | SRR6046397 | Other | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6045399 | Other | None | SRR6325444 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046482 | HR-TB | None | ERR4829994 | RR-TB | lineage4.6 | None | ERR4829343 | Sensitive | lineage4.6 | None | SRR6046460 | HR-TB | None | ERR4830677 | HR-TB | lineage4.6 | dz | ERR4830353 | Other | None | SRR6046540 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046644 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | SRR6325447 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | SRR6325442 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6511621 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | SRR6896147 | Sensitive | lineage4.8 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4872243 | MDR-TB | lineage4.6 | None | ERR4872073 | MDR-TB | lineage4.6 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4872143 | Pre-XDR-TB | lineage4.6 | None | ERR294248 | HR-TB | None | SRR6789626 | Other | None | ERR5311099 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR502532 | HR-TB | None | ERR323036 | HR-TB | None | ERR502889 | Other | None | SRR7496517 | Other | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR5311081 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323038 | HR-TB | None | SRR7535086 | Other | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | ERR323043 | HR-TB | None | ERR323041 | HR-TB | None | ERR1034634 | HR-TB | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR067681 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR1035157 | Other | lineage4.9 | None | ERR1035142 | Sensitive | lineage4.6 | sa | ERR1034652 | Other | None | ERR1063896 | Sensitive | None | ERR1063857 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR133986 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR137286 | Sensitive | lineage4 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283017 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283040 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3439432 | Other | None | ERR3283036 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3283051 | Other | lineage4.9 | None | ERR3283055 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3470610 | Sensitive | lineage4.6 | None | ERR3468544 | HR-TB | None | ERR3470594 | Sensitive | lineage4.6 | None | ERR349299 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR3470627 | Sensitive | lineage4.6 | None | ERR349265 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR3797046 | HR-TB | None | ERR373947 | Sensitive | lineage4 | None | ERR3797015 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797016 | HR-TB | None | ERR3797069 | Other | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797063 | HR-TB | None | ERR3797082 | Other | lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR3797083 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR387051 | HR-TB | None | ERR386911 | Sensitive | lineage4.6 | None |
|---|
