Rv3596c - c.1299G>C
Drug resistance types
34 Sensitive
1 RR-TB
41 HR-TB
2 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
31 Other
lineage Counts
| lineage | Count |
|---|---|
| 45 | |
| lineage4 | 12 |
| lineage4.9 | 34 |
| lineage4.8.1 | 1 |
| lineage2.2 | 3 |
| lineage3 | 1 |
| La1.8.1 | 1 |
| La1.3 | 2 |
| La1.2 | 1 |
| La1 | 1 |
| lineage4.1.2.1 | 1 |
| lineage6.1.3 | 1 |
| lineage4.8 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage2.2.1 | 2 |
| lineage1.1.1 | 1 |
| lineage4;lineage3;lineage2.2.1 | 1 |
| lineage4.3.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 113 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045233 | HR-TB | None | SRR6045892 | Sensitive | None | SRR6045053 | Other | None | SRR6046878 | HR-TB | lineage4 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046046 | Other | None | SRR6045399 | Other | None | SRR6046299 | HR-TB | None | SRR6046644 | HR-TB | None | SRR8217918 | HR-TB | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR067712 | HR-TB | lineage4 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR3283025 | HR-TB | None | ERR3283024 | Other | None | ERR3283041 | Other | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3445501 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797024 | Other | lineage4.9 | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3797044 | Other | None | ERR4596902 | HR-TB | lineage3 | None | ERR3797061 | Other | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797086 | Other | lineage4.9 | None | ERR4187734 | Other | La1.8.1 | None | ERR4769450 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4769551 | Other | La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4798262 | HR-TB | La1 | None | ERR4799025 | Pre-XDR-TB | None | ERR4798823 | HR-TB | lineage4 | None | ERR6358991 | HR-TB | None | ERR6359045 | HR-TB | None | ERR702404 | HR-TB | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | ERR736837 | Other | lineage4.9 | None | ERR736835 | HR-TB | None | ERR9787153 | Other | lineage6.1.3 | None | ERR736839 | Other | None | ERR736856 | HR-TB | lineage4 | None | ERR9119669 | HR-TB | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR18910194 | HR-TB | lineage2.2 | None | ERR176751 | HR-TB | None | SRR25827605 | Pre-XDR-TB | lineage4;lineage3;lineage2.2.1 | None | SRR3675270 | HR-TB | None | ERR181744 | HR-TB | None | SRR3675234 | Other | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR176643 | HR-TB | None | ERR212034 | HR-TB | None | ERR212123 | Other | None | ERR212121 | HR-TB | None | ERR4818536 | Other | lineage4.9 | None | ERR4815815 | Sensitive | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | ERR4819462 | Other | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341456 | Other | None | SRR5341315 | Sensitive | None | SRR5341330 | HR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR2693231 | Other | None | ERR2693254 | Other | None | ERR2693230 | Other | None | ERR2693257 | Other | None | ERR2660539 | Other | lineage4.9 | None |
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