Rv2477c - c.489C>T


Drug resistance types
21 Sensitive 5 RR-TB 51 HR-TB 26 MDR-TB 5 Pre-XDR-TB 3 XDR-TB 136 Other
lineage Counts
lineage Count
lineage4.9 60
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 1
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage2.2 3
lineage4.6.3;lineage4.9 1
lineage4.6.2.2 4
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9;lineage6.3 10
lineage2.2.1;lineage6.3 1
La1.2;La1.8.1 1
La1.7;lineage3.1;lineage4 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage2.1;lineage4.9 13
lineage4.1.1.1 2
lineage2.1 3
La3 2
La1.7.1;La1.7.X-unk4;lineage7 1
La1;lineage4.1.2 1
lineage4.9;lineage6.3 5
lineage4.8.1 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.2;lineage4.8.1;lineage4.9 2
lineage2.2.1 11
M.canetti;lineage4.2 1
La1.7;lineage4.9 5
lineage2.2.1.1 4
lineage4.1.2.1 12
16
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.2;lineage4.9 3
lineage4.1;lineage4.8 1
M.canetti;lineage2.2 2
La1.7;M.canetti;lineage4.9 3
lineage6.2.3 1
La3;lineage2.1;lineage6.3 1
lineage4.6.1.1 3
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage2 1
La3;lineage2.1;lineage4.9 3
La1.6;La3;M.canetti;lineage4.2.2 1
La3;lineage4.9 2
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage4.3.4.2.1 1
lineage4.8 7
La1.7.1;lineage4.9 1
lineage1.1.3.2 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.1.3 2
lineage5.2 2
lineage4 2
lineage4.3.4.1 1
lineage1.1.3.1 1
lineage2.1;lineage6.3 2
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage2.2.2;lineage4 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.1 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4.9;lineage6.1.3 1
La1.2.BCG;La1.8.1 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La3;M.canetti;lineage2.2.1 1
lineage4.1.1.3 2
M.canetti;lineage2.1;lineage4.9 2
lineage4.3.1;lineage4.9;lineage6 1
lineage1.2.2.2 1
lineage4.6.3;lineage4.9;lineage6.3 1
lineage3 2
lineage2.1;lineage4.3.2;lineage4.9 1
La1;lineage4.9 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4.4.1.2 1
lineage4.3.3 1
M.canetti;lineage2.1;lineage6.3 1
lineage3.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage3.1;lineage9 1
M.canetti;lineage4.2;lineage4.9 1
lineage6.3.1 1
La3;lineage2.2.1 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
spoligotype Counts
spoligotype Count
None 247
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1169194 Other lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR20969708 HR-TB lineage2.2 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR4811450 Sensitive lineage4.6.2.2 None
SRR6045548 Sensitive lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR6359066 HR-TB lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR7240033 Other La1.2;La1.8.1 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR1063846 HR-TB lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
SRR1180319 Sensitive lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR702406 Other lineage2.1 None
SRR1172817 Other La3 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR9970978 Sensitive La1;lineage4.1.2 None
SRR12416840 MDR-TB lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR26399265 Other lineage2.2.1 None
SRR1183144 Other lineage2.2.1 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR29096174 Sensitive La1.7;lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR3804155 Other lineage4.1.2.1 None
ERR736831 Other lineage4.9 None
ERR212001 HR-TB None
SRR6789621 Other lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR9786525 Other lineage4.1;lineage4.8 None
ERR9786604 Other None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR6046141 Other lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4407463 HR-TB None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR9787061 Sensitive lineage6.2.3 None
SRR1180406 Sensitive lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3675275 Other lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR18213713 HR-TB None
SRR20969677 HR-TB La3;lineage2 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR26399973 Other La3;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR3675501 Other La1.7;lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
ERR987765 Sensitive lineage4.6.1.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR11466146 Other lineage4.3.4.2.1 None
SRR1184312 Other lineage2.2.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675267 Other La1.7;lineage4.9 None
ERR9786444 Sensitive lineage4.8 None
SRR3675216 Other lineage2.1;lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR4769474 HR-TB lineage4.9 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR3675248 Other lineage4.9 None
SRR1196546 Other lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6511621 Sensitive lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR7821123 Other lineage1.1.3.2 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR10680194 MDR-TB lineage4.8 None
ERR323037 Other lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR11049020 Other lineage4.8 None
ERR4872094 MDR-TB lineage5.2 None
ERR4816478 HR-TB lineage4 None
SRR1181091 Other lineage2.2.1.1 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR176643 Other La3;lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR4816656 Other lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
SRR14782405 HR-TB lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR1180172 Other lineage2.2.1 None
SRR3675488 Other La1.7;lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR1180147 Other lineage2.2.1.1 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR502912 Other lineage2.2.1 None
ERR3797070 Other lineage4.9 None
SRR5341456 Other lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR9786642 Other lineage4.1.2.1 None
ERR9786843 Other None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR2514692 Other None
SRR25827682 Other None
ERR234659 Other None
SRR29093105 Other lineage2.2.2;lineage4 None
ERR9786671 Other None
ERR9786421 Other lineage4.1.2.1 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR1184372 MDR-TB None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR1180312 Sensitive lineage4.9 None
ERR9786440 Other lineage4.1 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR3675232 Other lineage4.1.2.1 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR29051093 Other lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR29050928 Other lineage4.9 None
SRR29096541 Other lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR4796577 HR-TB None
ERR9786694 Other lineage4.1.2.1 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786569 Other lineage4.8 None
ERR1199132 Sensitive lineage4.6.1.1 None
ERR3283040 HR-TB lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1196583 Other lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR10680073 MDR-TB lineage4.8 None
SRR29772570 Other lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR550636 MDR-TB lineage4.1.1.3 None
SRR1180444 Sensitive lineage4.9 None
ERR9786384 Sensitive lineage4.1.2.1 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR18003019 Other lineage2.2.1 None
ERR9786682 Other lineage4.1.2.1 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR6358979 Other lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4799536 Pre-XDR-TB lineage1.2.2.2 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR20969731 Other lineage2.2.1 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR4799025 Other lineage4.8 None
SRR6045526 Other lineage4.9 None
SRR14782054 Other lineage4.9 None
ERR181887 Other lineage4.9 None
ERR2027263 Other lineage4 None
SRR6789626 Other None
SRR26159043 Other lineage4.9 None
SRR29051077 Other lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR9786617 Other lineage4.1.1.1 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR4797588 MDR-TB lineage3 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR3675236 Other None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR3283021 HR-TB lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
ERR4800341 Other lineage3 None
SRR1172728 RR-TB La3 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9117709 Other None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR3675549 Other lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR1172234 Other lineage4.9 None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR26937107 MDR-TB lineage2.2.1 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR2229542 Other lineage4.8 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR1184024 RR-TB lineage2.2.1.1 None
ERR779852 Sensitive lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
SRR7496472 Other lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR6359082 Other lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9119500 MDR-TB lineage5.2 None
SRR1184381 MDR-TB None
SRR3675221 Other lineage4.9 None
ERR9787197 Other None
SRR28119752 Other lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR9786601 Other lineage4.1.2.1 None
SRR12142341 HR-TB lineage2.1 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR1180355 Sensitive lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
SRR3675457 Other lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR4819241 Other lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR4818929 HR-TB lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR9787139 Other lineage6.3.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR1173355 Other lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR9786627 Other lineage4.1.2.1 None