lineage | Count |
---|---|
lineage4.9;lineage7 | 1 |
lineage4.9 | 88 |
lineage4.7 | 1 |
lineage4 | 7 |
lineage1.1.1 | 1 |
lineage2.2.1 | 7 |
lineage4.1;lineage4.9 | 1 |
lineage4.2.1.1;lineage4.3.3 | 1 |
lineage4.1.2 | 1 |
La1.8.1 | 3 |
lineage2.2 | 2 |
La1.7.1;lineage4.9 | 1 |
lineage4.3.4.1 | 1 |
La1.7.1;La1.7.X-unk4;lineage7 | 1 |
lineage6.1.2 | 1 |
lineage1;lineage4.9 | 1 |
La1.7;lineage4.9;lineage6 | 1 |
La2;lineage2.2 | 1 |
lineage4.1.2.1 | 3 |
La1.2;La1.8.1 | 1 |
lineage4.3.2.1 | 1 |
lineage3 | 1 |
lineage4.8 | 1 |
lineage2.1;lineage4.9;lineage6.3 | 1 |
lineage4.3.4.2 | 2 |
La3;lineage4.9 | 1 |
2 | |
lineage4.5 | 1 |
lineage4.3.3 | 1 |
La2;lineage4.9 | 1 |
lineage2.2.2 | 1 |
lineage4.2.1 | 1 |
lineage1.1.3.1 | 1 |
lineage2.2.1.1 | 1 |
spoligotype | Count |
---|---|
None | 140 |
ID | Drug resistance | Lineage | Country iso2 | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | SRR6045503 | Sensitive | lineage4.9 | None | ERR4796254 | Sensitive | lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819241 | Other | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR3675580 | Sensitive | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR1791747 | Other | La1.8.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR736848 | Other | lineage4.9 | None | SRR3675279 | Sensitive | lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | SRR11662694 | Other | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR926163 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR3675585 | Sensitive | lineage4.9 | None | ERR9787030 | RR-TB | lineage6.1.2 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | SRR11462861 | Other | La1.8.1 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | SRR7236177 | Other | La1.8.1 | None | SRR30182471 | Sensitive | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | SRR3675265 | Other | lineage4 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR7496471 | Sensitive | lineage4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR4815441 | HR-TB | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR363499 | Sensitive | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4799378 | Sensitive | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR9970979 | Sensitive | lineage4.8 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR6045706 | Sensitive | lineage4.9 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR4796577 | HR-TB | None | ERR926157 | Sensitive | lineage4.9 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR1063896 | Sensitive | None | ERR400320 | Sensitive | lineage4.9 | None | ERR9786592 | Other | lineage4.3.4.2 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | ERR6358979 | Other | lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR18910194 | HR-TB | lineage2.2.2 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR926161 | Sensitive | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR4816478 | HR-TB | lineage4 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR4816656 | Other | lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None |
---|