Rv0668 - c.1296C>G
Drug resistance types
32 Sensitive
24 RR-TB
21 HR-TB
16 MDR-TB
8 Pre-XDR-TB
1 XDR-TB
20 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 13 |
| lineage4.4.1.1 | 4 |
| lineage4.3 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4 | 9 |
| 7 | |
| lineage4.9 | 23 |
| La1.8.1 | 3 |
| lineage4.6.2.2 | 4 |
| lineage1.2.1.2.1 | 2 |
| lineage1.1.2 | 13 |
| lineage4;lineage3.1 | 1 |
| lineage3 | 15 |
| lineage4.3.3 | 2 |
| lineage2.2 | 5 |
| lineage4.9;lineage2.2.1 | 1 |
| lineage2.2.2 | 1 |
| lineage1.2.2.2 | 2 |
| lineage4.3.4.1 | 1 |
| lineage4.2.1 | 1 |
| lineage3.1.3 | 1 |
| La1.7.1 | 1 |
| lineage4.8 | 3 |
| lineage4.3.4.2.1 | 2 |
| lineage4;lineage2 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.1.2.1 | 1 |
| lineage1.1.1 | 2 |
| lineage4.1.1.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 122 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4872269 | XDR-TB | lineage2.2.1 | None | SRR7645936 | Sensitive | lineage2.2.1 | None | SRR6896383 | RR-TB | lineage4.4.1.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | DRR184982 | RR-TB | lineage2.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR10796625 | RR-TB | lineage4.4.1.1 | None | ERR067712 | HR-TB | lineage4 | None | ERR108471 | HR-TB | lineage4 | None | ERR10796630 | HR-TB | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3797067 | Other | La1.8.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3283051 | Other | lineage4.9 | None | ERR3283053 | Other | lineage4.9 | None | ERR3797068 | Other | La1.8.1 | None | ERR400350 | Sensitive | lineage4.9 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR405191 | Other | lineage4.9 | None | ERR400443 | Sensitive | lineage1.2.1.2.1 | None | ERR405190 | Sensitive | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4596906 | Sensitive | lineage1.1.2 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4596902 | HR-TB | lineage3 | None | ERR4596937 | Sensitive | lineage1.1.2 | None | ERR9119101 | Sensitive | lineage4.3.3 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR5908229 | Sensitive | lineage4.3.3 | None | ERR5979454 | Pre-XDR-TB | lineage3 | None | ERR773806 | Sensitive | lineage2.2.1 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR702404 | HR-TB | None | SRR1013528 | Pre-XDR-TB | lineage2.2 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | SRR1013527 | RR-TB | lineage2.2 | None | SRR1106670 | Other | lineage4.9 | None | SRR1062864 | Sensitive | lineage4.9;lineage2.2.1 | None | SRR1013531 | MDR-TB | lineage4.9 | None | SRR1062865 | HR-TB | lineage2.2.2 | None | SRR1169591 | Sensitive | lineage1.1.2 | None | SRR1141261 | MDR-TB | lineage4.9 | None | SRR11462861 | Other | La1.8.1 | None | SRR1169473 | Sensitive | lineage1.1.2 | None | SRR1173013 | Sensitive | lineage1.1.2 | None | SRR1172848 | MDR-TB | lineage1.1.2 | None | SRR1172873 | MDR-TB | lineage1.1.2 | None | SRR1172086 | Sensitive | lineage1.1.2 | None | SRR1172710 | Sensitive | lineage1.2.2.2 | None | SRR1172938 | MDR-TB | lineage3 | None | SRR1173037 | Sensitive | lineage1.1.2 | None | SRR1173014 | MDR-TB | lineage3 | None | SRR1173055 | MDR-TB | lineage2.2.1 | None | SRR1173656 | Sensitive | lineage1.1.2 | None | SRR1173310 | MDR-TB | None | SRR1173165 | Sensitive | lineage2.2.1 | None | SRR1173632 | RR-TB | lineage2.2.1 | None | SRR1175151 | MDR-TB | lineage3 | None | SRR1173727 | MDR-TB | lineage3 | None | SRR1173719 | HR-TB | lineage3 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR14334195 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR18572456 | Sensitive | lineage4.9 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR16156832 | RR-TB | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR18572454 | RR-TB | lineage4.9 | None | SRR2101471 | RR-TB | lineage4.4.1.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR19303773 | Other | lineage4.6.2.2 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02599090 | MDR-TB | lineage3 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SAMN02599094 | Sensitive | lineage1.1.2 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR3105762 | HR-TB | None | ERR1815538 | Other | La1.7.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | ERR4817069 | RR-TB | None | ERR4814623 | Other | lineage4.8 | None | ERR4815556 | RR-TB | lineage3 | None | ERR4814639 | HR-TB | lineage4 | None | ERR4815079 | RR-TB | lineage3 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | SAMN02599089 | MDR-TB | lineage3 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR2229791 | RR-TB | lineage4.9 | None | ERR4817832 | Sensitive | lineage1.2.1.2.1 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR2509885 | RR-TB | lineage3 | None | SAMN02599179 | MDR-TB | lineage1.1.2 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4819430 | Sensitive | lineage4.1.2.1 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR2660539 | Other | lineage4.9 | None | ERR2514137 | Pre-XDR-TB | lineage2.2.1 | None | ERR4820394 | Other | lineage4.3.4.2.1 | None | SAMN02599061 | MDR-TB | lineage3 | None | SAMN02599075 | Sensitive | lineage1.1.2 | None | SAMN02599068 | Sensitive | lineage1.2.2.2 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4820784 | Sensitive | lineage4.9 | None | ERR4820586 | Other | lineage3 | gb | SRR6046210 | Other | lineage4 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4821550 | Other | lineage2.2.1 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6045217 | Other | lineage4 | None |
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