Rv0668 - c.3534C>T
Drug resistance types
11 Sensitive
0 RR-TB
80 HR-TB
3 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
44 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1 | 1 |
| 71 | |
| lineage4.1.2.1 | 1 |
| lineage4 | 10 |
| lineage2.2.1.1 | 5 |
| lineage2.2.1 | 7 |
| lineage3.1 | 2 |
| La2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.9 | 12 |
| La1.8.1 | 1 |
| lineage6.1.1 | 2 |
| lineage1.2.2.2 | 1 |
| La1.2 | 2 |
| lineage3 | 3 |
| lineage3.1.2 | 1 |
| lineage2.2 | 3 |
| lineage4.3.2 | 1 |
| lineage4.3.2.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| La3 | 1 |
| lineage1.2.1.2 | 1 |
| La1.7.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.3 | 1 |
| lineage4;lineage2 | 1 |
| lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 139 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6789624 | MDR-TB | lineage4.1 | None | ERR4830353 | Other | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR4831117 | HR-TB | None | SRR6046492 | Other | None | SRR6046824 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | SRR6832249 | Other | lineage2.2.1 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR502524 | HR-TB | La2 | None | ERR323036 | HR-TB | None | ERR323038 | HR-TB | None | ERR502889 | Other | None | SRR7496471 | Sensitive | None | ERR323039 | HR-TB | None | ERR323055 | HR-TB | None | ERR323041 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323053 | HR-TB | None | ERR067681 | HR-TB | None | ERR323063 | HR-TB | None | ERR3283017 | HR-TB | None | ERR11466044 | Other | lineage4.1.1.3 | None | ERR133986 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3439432 | Other | None | ERR3283055 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445501 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797046 | HR-TB | None | ERR3797083 | HR-TB | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR403298 | HR-TB | lineage4 | None | ERR4188247 | HR-TB | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR387051 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4798406 | HR-TB | None | ERR4798823 | HR-TB | lineage4 | None | ERR4798504 | Other | lineage3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4799025 | Pre-XDR-TB | None | ERR6198317 | Other | La1.2 | None | ERR4811493 | HR-TB | None | ERR6358979 | Other | None | ERR6358837 | HR-TB | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359045 | HR-TB | None | ERR6866410 | Sensitive | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR6866547 | Sensitive | lineage4 | None | ERR702404 | HR-TB | None | ERR736848 | HR-TB | None | ERR736865 | HR-TB | None | ERR8975532 | HR-TB | lineage4.3.2.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR1169306 | Other | None | ERR9786076 | Sensitive | lineage3 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR1169249 | Other | La3 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR987722 | HR-TB | None | SRR1167384 | Other | lineage4 | None | SRR1172310 | HR-TB | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1174897 | HR-TB | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR14782405 | HR-TB | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR1510066 | Other | lineage1.2.1.2.1 | None | SRR17832802 | HR-TB | lineage3 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR20970016 | Other | lineage2.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR158583 | HR-TB | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR3675488 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675222 | Other | None | ERR181744 | HR-TB | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675501 | HR-TB | None | SRR3675270 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR176740 | HR-TB | None | ERR176643 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | ERR176751 | HR-TB | None | SRR3675456 | HR-TB | None | SRR3675502 | Other | None | ERR212033 | HR-TB | None | SRR3675550 | Other | None | ERR212123 | Other | None | SRR3675555 | HR-TB | None | SRR3675571 | HR-TB | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR234659 | HR-TB | None | ERR1035162 | Other | None | SRR8380944 | Sensitive | lineage1.1.2 | None | ERR4818607 | Sensitive | lineage4.9 | None | ERR1035138 | MDR-TB | None | SRR5341418 | Other | None | SRR5535933 | HR-TB | None | SRR5341330 | HR-TB | None | ERR1023509 | Other | None | ERR6359082 | Other | lineage4.9 | None | SRR5341470 | HR-TB | None | SRR6045892 | Sensitive | None | ERR2660539 | Other | lineage4.9 | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6045053 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6046046 | Other | None | SRR6046385 | Other | lineage4.9 | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046397 | Other | None |
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