lineage | Count |
---|---|
30 | |
lineage4.9 | 34 |
lineage4 | 42 |
lineage4.2.1 | 1 |
lineage2.1 | 2 |
lineage2.2.1 | 10 |
lineage4.3.4.2.1 | 1 |
lineage5.1.4 | 1 |
lineage3 | 2 |
lineage4.9;lineage2.1 | 1 |
lineage4.1.2.1 | 1 |
lineage4.1.2 | 1 |
lineage4.3.2.1 | 1 |
lineage4.5 | 1 |
lineage4.3.4.1 | 1 |
lineage4.1 | 1 |
lineage4.1.1.3 | 1 |
spoligotype | Count |
---|---|
None | 131 |
ID | Drug resistance | Lineage | Country iso2 | SRR3675522 | Other | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR5341387 | Other | lineage4 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR2512770 | Other | lineage4.2.1 | None | SRR5341453 | Sensitive | None | SRR5341373 | HR-TB | lineage4 | None | SRR3675553 | Sensitive | lineage4.9 | None | SRR5341422 | HR-TB | lineage2.1 | None | SRR3675555 | HR-TB | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR2513283 | Other | lineage5.1.4 | None | SRR5341425 | Other | lineage4 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341396 | Other | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341315 | Sensitive | None | SRR5341323 | Sensitive | lineage4 | None | SRR6046245 | Other | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR6044838 | Other | lineage4.9 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341467 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341469 | Other | lineage4 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045399 | Other | None | SRR6046382 | HR-TB | lineage2.2.1 | None | ERR502510 | Sensitive | lineage4 | None | ERR294266 | HR-TB | None | SRR6511621 | HR-TB | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831638 | Sensitive | None | ERR502943 | HR-TB | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR323066 | Sensitive | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR3445501 | HR-TB | None | ERR1035122 | Sensitive | None | ERR1063896 | Sensitive | None | ERR137286 | Sensitive | lineage4 | None | ERR3283025 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3445502 | HR-TB | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR3797081 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR3797015 | HR-TB | None | ERR400326 | Sensitive | lineage4 | None | ERR387051 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR400320 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4798099 | Other | None | ERR4024991 | Other | None | ERR4797313 | HR-TB | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797474 | Other | None | ERR4812155 | Sensitive | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR736839 | Other | None | ERR6866022 | Other | None | ERR736834 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR702404 | HR-TB | None | SRR1158918 | Sensitive | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173568 | Other | lineage4.9 | None | SRR1173777 | Other | lineage4 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR3675229 | Other | lineage4 | None | SRR3675477 | Other | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR4814396 | Sensitive | lineage4.1.1.3 | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675279 | Other | None | SRR3675387 | Sensitive | None | SRR3675318 | Other | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675456 | HR-TB | None | SRR3675455 | Sensitive | lineage4 | None |
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