Rv0006 - c.1536C>G


Drug resistance types
34 Sensitive 2 RR-TB 21 HR-TB 5 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 20 Other
lineage Counts
lineage Count
2
lineage4.9 43
lineage2.2.1;lineage4 1
lineage4.9;lineage7 2
M.canetti;lineage4.9 2
La1.7;M.canetti;lineage4.9 2
lineage2.2.1 6
La1.7;lineage4.9;lineage7 1
lineage1.1.1;lineage4 1
lineage2.1;lineage4.9;lineage7 1
lineage4.1.2.1 1
La1.7;lineage4.9 2
lineage4.2;lineage4.8.1;lineage4.9 2
lineage2.1;lineage4.9;lineage6.3 1
lineage5.1.4 1
lineage4.2;lineage4.9 2
lineage4.1.1.3;lineage4.9 1
lineage1;lineage4.9 1
lineage4.2.1.1;lineage4.3.3 1
lineage4.1.2 1
lineage4.1.1.3 1
lineage4.3.2.1 1
lineage4.3.4.2.1 1
lineage4.3.4.1 1
La1.7.1;La1.7.X-unk4;lineage7 1
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage4.8;lineage4.9 2
lineage4.5 1
spoligotype Counts
spoligotype Count
None 83
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR1063896 Sensitive None
SRR1159378 Other lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR702405 Sensitive lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR3675473 Sensitive lineage4.9 None
ERR4798099 Other lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR11662694 Other lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR400336 Sensitive lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
SRR5341469 HR-TB lineage4.9 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR6046382 Sensitive lineage2.2.1 None
ERR323062 Sensitive lineage4.9 None
SRR1158918 Sensitive lineage4.9 None
ERR137286 Other lineage4.9 None
ERR11252736 Other lineage4.9 None
ERR4821686 Sensitive lineage4.1.2.1 None
SRR14801759 HR-TB La1.7;lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR502510 Sensitive lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
SRR3675387 Other lineage4.9 None
SRR3675247 Other lineage4.9 None
SRR5341308 Sensitive lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR736834 Sensitive lineage4.9 None
SRR12708416 Sensitive None
SRR5341299 HR-TB lineage4.9 None
ERR2513283 Sensitive lineage5.1.4 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR323066 Sensitive lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
ERR502511 Sensitive lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR3675522 Other lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR3675455 Sensitive lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
ERR400345 Other lineage4.9 None
ERR4814396 Sensitive lineage4.1.1.3 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR400326 Other lineage4.9 None
SRR6046245 Other lineage4.9 None
ERR751326 Other lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
SRR3675541 Sensitive lineage4.9 None
SRR5341453 Other lineage4.9 None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR12416842 HR-TB lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR6044819 Sensitive lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR4024991 Other lineage4.8;lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
ERR6866022 Other lineage4.8;lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR4811031 Sensitive lineage4.5 None