Rv0006 - c.1536C>G


Drug resistance types
59 Sensitive 2 RR-TB 27 HR-TB 6 MDR-TB 4 Pre-XDR-TB 0 XDR-TB 33 Other
lineage Counts
lineage Count
30
lineage4.9 34
lineage4 42
lineage4.2.1 1
lineage2.1 2
lineage2.2.1 10
lineage4.3.4.2.1 1
lineage5.1.4 1
lineage3 2
lineage4.9;lineage2.1 1
lineage4.1.2.1 1
lineage4.1.2 1
lineage4.3.2.1 1
lineage4.5 1
lineage4.3.4.1 1
lineage4.1 1
lineage4.1.1.3 1
spoligotype Counts
spoligotype Count
None 131
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675522 Other None
SRR3675548 Sensitive lineage4.9 None
SRR3675542 Other lineage4.9 None
SRR3675547 Other lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
SRR5341387 Other lineage4 None
SRR3675577 Sensitive lineage4.9 None
ERR2512770 Other lineage4.2.1 None
SRR5341453 Sensitive None
SRR5341373 HR-TB lineage4 None
SRR3675553 Sensitive lineage4.9 None
SRR5341422 HR-TB lineage2.1 None
SRR3675555 HR-TB None
SRR5341384 Sensitive lineage4.9 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR2513283 Other lineage5.1.4 None
SRR5341425 Other lineage4 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR5341396 Other lineage4 None
SRR5341432 HR-TB lineage4 None
SRR5341293 HR-TB lineage4 None
SRR5341437 Sensitive lineage4.9 None
ERR2514552 Sensitive lineage3 None
SRR5341296 Sensitive lineage4.9 None
SRR5341299 Sensitive lineage4 None
SRR5341300 Other lineage4 None
SRR5341298 Sensitive lineage4 None
SRR5341303 RR-TB lineage4 None
SRR5341461 Sensitive lineage4 None
SRR5341308 Sensitive lineage4 None
SRR5341313 HR-TB None
SRR5341315 Sensitive None
SRR5341323 Sensitive lineage4 None
SRR6046245 Other lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR502511 Sensitive lineage4.9;lineage2.1 None
ERR4821686 Sensitive lineage4.1.2.1 None
SRR6044838 Other lineage4.9 None
SRR5341366 Sensitive lineage4 None
SRR5341467 Other lineage4 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
SRR5341469 Other lineage4 None
SRR6044819 Sensitive lineage4.9 None
SRR6045399 Other None
SRR6046382 HR-TB lineage2.2.1 None
ERR502510 Sensitive lineage4 None
ERR294266 HR-TB None
SRR6511621 HR-TB None
ERR4831617 MDR-TB lineage2.2.1 None
ERR4831638 Sensitive None
ERR502943 HR-TB None
SRR7535082 Sensitive lineage4 None
SRR9970980 Other lineage4.1.2 None
SRR9971112 Other lineage2.2.1 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR9971114 Other lineage2.2.1 None
ERR323066 Sensitive lineage4 None
ERR323085 Sensitive lineage4 None
ERR3445501 HR-TB None
ERR1035122 Sensitive None
ERR1063896 Sensitive None
ERR137286 Sensitive lineage4 None
ERR3283025 HR-TB None
ERR3283030 HR-TB lineage4.9 None
ERR3273109 MDR-TB lineage4 None
ERR3445502 HR-TB lineage4 None
ERR369156 Sensitive lineage4.9 None
ERR369151 Sensitive lineage4.9 None
ERR3797081 Sensitive lineage4 None
ERR369157 Sensitive lineage4.9 None
ERR3797015 HR-TB None
ERR400326 Sensitive lineage4 None
ERR387051 HR-TB None
ERR3797086 Other lineage4.9 None
ERR400320 Sensitive lineage4 None
ERR400336 Sensitive lineage4 None
ERR400345 Other lineage4 None
ERR4798099 Other None
ERR4024991 Other None
ERR4797313 HR-TB None
ERR4796254 Sensitive lineage4 None
ERR4797184 Sensitive lineage4 None
ERR4797264 Sensitive None
ERR4797350 Sensitive lineage4.9 None
ERR4797474 Other None
ERR4812155 Sensitive None
ERR4799547 Sensitive lineage2.2.1 None
ERR4799378 Sensitive lineage4 None
ERR4811031 Sensitive lineage4.5 None
ERR4811030 Sensitive None
ERR736839 Other None
ERR6866022 Other None
ERR736834 Sensitive lineage4 None
ERR6866639 Other None
ERR702404 HR-TB None
SRR1158918 Sensitive lineage4 None
ERR736872 Sensitive lineage4 None
ERR751326 Sensitive lineage4 None
SRR1172885 HR-TB lineage4.9 None
SRR1173568 Other lineage4.9 None
SRR1173777 Other lineage4 None
SRR1175052 HR-TB lineage4.9 None
SRR1175496 HR-TB lineage4.9 None
SRR1180996 HR-TB lineage4 None
SRR1175500 MDR-TB lineage4 None
SRR1175508 Other lineage4.9 None
SRR1175507 MDR-TB lineage4 None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR1183965 Sensitive lineage4.9 None
SRR12708416 Sensitive lineage4.1 None
SRR2010299 Pre-XDR-TB lineage2.2.1 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR3675229 Other lineage4 None
SRR3675477 Other lineage4.9 None
SRR3675210 Sensitive lineage4.9 None
SRR3675473 Sensitive lineage4.9 None
ERR4814396 Sensitive lineage4.1.1.3 None
ERR702405 Sensitive lineage2.1 None
SRR3675246 Sensitive lineage4 None
SRR3675284 HR-TB lineage4.9 None
SRR3675247 Other lineage4.9 None
SRR3675266 Sensitive lineage4.9 None
SRR3675280 HR-TB lineage4.9 None
SRR3675279 Other None
SRR3675387 Sensitive None
SRR3675318 Other lineage4.9 None
SRR3675514 Sensitive lineage4.9 None
SRR3675456 HR-TB None
SRR3675455 Sensitive lineage4 None