Rv2477c - c.183T>C


Drug resistance types
7 Sensitive 10 RR-TB 59 HR-TB 39 MDR-TB 4 Pre-XDR-TB 2 XDR-TB 180 Other
lineage Counts
lineage Count
lineage4.1.2.1 12
19
lineage2.1 3
lineage4.3.4.2.1 4
lineage4.9 59
lineage2.2.1 20
lineage4.3.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9;lineage7 1
lineage2.1;lineage4.9 14
lineage4.9;lineage6.3 8
lineage4.3.3 1
La1.7;M.canetti;lineage4.9 4
La1.7 2
lineage6.1.1 2
La3;M.canetti;lineage2.2.1 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage2.1;lineage4.9;lineage6.3 9
La1.6;La3;M.canetti;lineage4.2.2 1
M.canetti;lineage2.1;lineage4.9 2
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage2.1;lineage6.3 2
lineage4.6.3;lineage4.9 2
lineage4.9;lineage7 3
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.3.2.1 1
La1.7;lineage4.9 7
lineage4.1.1.1 3
lineage3.1.2.2 1
lineage3 4
lineage4.9;lineage9 2
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage1.1.3.2 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4 3
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4.1.3 2
La3 1
La3;lineage2.2.1 2
M.canetti;lineage4.9 3
M.canetti;lineage2.1;lineage6.3 1
lineage2.2.1.1 5
lineage4.6.2.2 4
M.canetti;lineage4.2 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage5.2 2
lineage2.2.2;lineage4 1
lineage4.1 1
La3;lineage4.9 5
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4.2;lineage4.9 1
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage3.1;lineage9 1
La3;lineage2.1;lineage6.3 1
M.canetti;lineage4.2;lineage4.9 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage4.3.4 1
La3;lineage2.1;lineage4.9 2
lineage4.8 5
La2;lineage2.2 1
lineage1.1.2 3
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage2.2 3
La2;lineage4.9 2
La3;lineage2.2.2 1
lineage2.2.1;lineage3 1
lineage2.2.2 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;lineage4.3.4 1
La1.7.1;La1.7.X-unk4 1
lineage2.1;lineage4.3.2;lineage4.9 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 2
lineage4.4.1.2 1
lineage6.1.3 2
lineage4.8.1 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage4.1.1.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage1.2.1.2 1
lineage4.7 2
lineage4.2;lineage4.6.3;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage4.6.1.1 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage4.8 2
M.canetti;lineage4.9;lineage9 1
lineage6.3.1 1
La3;lineage2 1
La3;lineage1.1.2 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage2.2.1;lineage6.3 1
M.canetti;lineage1 1
La2;lineage4.9;lineage9 1
lineage1.2.2.2 1
lineage4.3.4.1 1
La1.7;lineage4.2 1
spoligotype Counts
spoligotype Count
None 301
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR12142341 HR-TB lineage2.1 None
ERR176549 Other lineage4.3.4.2.1 None
SRR1180226 HR-TB lineage4.9 None
SRR29231479 RR-TB lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
ERR4815752 Other lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
SRR21732980 Other lineage4.3.3 None
SRR3675232 Other lineage4.1.2.1 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR29051093 Other lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR6785413 Other lineage2.2.1 None
SRR3675222 Other La1.7 None
SRR1196583 Other lineage4.9 None
ERR9787014 Other lineage6.1.1 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR18003019 Other lineage2.2.1 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR13267017 Pre-XDR-TB lineage2.2.1 None
SRR3675495 Other lineage2.1;lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR20969731 Other lineage2.2.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR1181251 Other lineage2.2.1 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR4830353 Other La1.7 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR3675267 Other La1.7;lineage4.9 None
SRR6045526 Other lineage4.9 None
ERR181887 Other lineage4.9 None
SRR6789626 Other None
SRR5341330 Other lineage4.9 None
SRR29051077 Other lineage4.9 None
ERR9786617 Other lineage4.1.1.1 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR4797588 MDR-TB lineage3 None
ERR4798504 RR-TB lineage3 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR161037 Other lineage4.9 None
SRR1196546 Other lineage4.9 None
SRR1181328 Other lineage2.2.1 None
ERR4820854 Other lineage4.1.2.1 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
ERR4815441 HR-TB lineage4.9 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR7821123 Other lineage1.1.3.2 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR1165699 Other lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR4800341 Other lineage3 None
ERR4816478 HR-TB lineage4 None
SRR8217918 HR-TB lineage4.9 None
ERR9117709 Other None
ERR4816656 Other lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR9786611 HR-TB lineage4.1.3 None
SRR1172817 Other La3 None
SRR1180172 Other lineage2.2.1 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR3675456 RR-TB lineage4.9;lineage7 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR3799304 Other lineage6.1.1 None
SRR1184024 RR-TB lineage2.2.1.1 None
ERR9786645 Other lineage4.6.2.2 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1183144 Other lineage2.2.1 None
SRR6079962 HR-TB lineage2.2.1.1 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR6359082 Other lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
ERR9786642 Other lineage4.1.2.1 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR3675221 Other lineage4.9 None
ERR212001 HR-TB None
ERR9787197 Other None
ERR234659 Other None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4814352 Other lineage2.2.1 None
SRR29093105 Other lineage2.2.2;lineage4 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR4819422 HR-TB lineage4.9 None
ERR9786440 Other lineage4.1 None
SRR5341333 Other lineage2.1;lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
SRR25827507 MDR-TB lineage4.1.1.1 None
ERR1063858 HR-TB lineage4.9 None
SRR29050928 Other lineage4.9 None
SRR29096541 Other lineage4.9 None
SRR29096410 Other lineage4.9 None
ERR4819241 Other lineage4.9 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR1196768 MDR-TB None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR181744 HR-TB La3;lineage4.9 None
SRR29097026 Other lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR3675275 Other lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR6785267 Other lineage2.2.1 None
SRR18213713 HR-TB None
SAMN02585910 Other lineage2.2.1 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR736817 HR-TB lineage4.3.4 None
SRR3675214 Other lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR4817735 Other lineage4.8 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR25827687 MDR-TB lineage1.1.2 None
ERR3797069 Other lineage4.9 None
SRR11972306 Pre-XDR-TB lineage2.2.1 None
SRR26399973 Other La3;lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR20969708 HR-TB lineage2.2 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR108125 RR-TB lineage4.9 None
SRR3675446 RR-TB lineage4.9 None
ERR13245558 MDR-TB La3;lineage2.2.2 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR176675 Sensitive lineage4.3.4.2.1 None
SRR15368973 Other lineage4.9 None
ERR4815604 Other None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR18910194 HR-TB lineage2.2.2 None
SRR21733183 RR-TB lineage1.1.2 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
ERR4816999 Other None
SRR26159043 Other lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR29096150 Other lineage4.9 None
SRR8380944 Sensitive lineage1.1.2 None
ERR176793 Other lineage4.1.1.1 None
SRR3675236 Other None
SRR3675524 Other lineage4.9;lineage6.3 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR11081258 Other lineage4.8 None
ERR4819877 HR-TB lineage4.9 None
ERR11049020 Other lineage4.8 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR702406 Other lineage2.1 None
SRR3675441 Other lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR1172234 Other lineage4.9 None
ERR473332 Other lineage4.9 None
SRR26937107 MDR-TB lineage2.2.1 None
ERR1023236 Other lineage6.1.3 None
SRR12708389 MDR-TB lineage4.8.1 None
SRR3675488 Other La1.7;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR3675311 Other lineage4.9 None
SRR1180147 Other lineage2.2.1.1 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR502912 Other lineage2.2.1 None
SRR7131023 Other lineage4.1.2.1 None
ERR3797070 Other lineage4.9 None
ERR9786843 Other None
ERR11252664 Other lineage2.2.1 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
ERR11465024 Other lineage4.1.1.3 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
SRR3675539 HR-TB lineage4.9;lineage7 None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR7496523 Other lineage4.7 None
ERR9786604 Other None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR6046382 Sensitive lineage2.2.1 None
SRR3675457 Other lineage4.9 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
ERR9787165 Other lineage6.1.3 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR1172951 Other lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1173778 Other lineage4.9 None
ERR9786569 Other lineage4.8 None
ERR11082350 MDR-TB lineage4.6.2.2 None
ERR4818929 HR-TB lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4817893 Other La3;lineage4.8 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR387051 Other lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR9787139 Other lineage6.3.1 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
SRR1175074 Other None
SRR20969677 HR-TB La3;lineage2 None
ERR4819932 Other lineage4.7 None
ERR9786682 Other lineage4.1.2.1 None
ERR9786627 Other lineage4.1.2.1 None
SRR3675501 Other La1.7;lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4820773 HR-TB lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1034880 MDR-TB lineage2.2.1 pt
ERR11081864 Other lineage3 None
ERR11466146 Other lineage4.3.4.2.1 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
SRR29016901 Other La3;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR15014655 Other M.canetti;lineage1 None
SRR3675248 Other lineage4.9 None
ERR3283044 Other lineage4 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR7535086 Other None
ERR4797201 Other lineage1.2.2.2 None
ERR4872094 MDR-TB lineage5.2 None
SRR28119777 Other lineage4.9 None
SRR1181091 Other lineage2.2.1.1 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR7496509 Other None
ERR736867 Other lineage2.1;lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR12015083 Other La3;lineage4.8 None
SRR29017461 Other La3;lineage4.9 None
ERR2229542 Other lineage4.8 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4799513 HR-TB lineage2.2 None
SRR1183111 HR-TB lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR23961559 Other La1.7;lineage4.2 None
SRR7496472 Other lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
SRR11662690 HR-TB lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR2514692 Other None
ERR987722 MDR-TB None
SRR25827682 Other None
SRR28119805 Other lineage4.9 None
SRR6789621 Other lineage4.9 None
SRR28119752 Other lineage4.9 None