Rv3245c - c.882C>T


Drug resistance types
28 Sensitive 10 RR-TB 46 HR-TB 15 MDR-TB 4 Pre-XDR-TB 3 XDR-TB 43 Other
lineage Counts
lineage Count
lineage3.1;lineage9 1
lineage4.9 74
lineage2.1;lineage4.9;lineage7 1
lineage4.1.2.1 2
lineage2.2.1 15
lineage4.9;lineage7 3
lineage2.2 1
lineage4.2.1 1
lineage1;lineage4.9 1
lineage4.5 1
M.canetti;lineage1 1
lineage4.3.2.1 1
lineage4.1;lineage4.8 2
lineage2.1;lineage4.9;lineage6.3 1
lineage4.4.1.2 1
lineage4 5
lineage4.8;lineage4.9 2
4
M.canetti;lineage2.2 2
lineage4.3.4.2.1 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage5.2 2
lineage4.6.2.2 3
lineage4.3.3 1
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage4.1;lineage4.9 1
lineage5.1.4 1
M.canetti;lineage4.9;lineage9 1
La3;lineage2.1;lineage4.9 1
lineage2.2.1;lineage4 1
lineage4.1.2 1
La3;lineage4.9 4
lineage3 2
M.canetti;lineage4.9 1
lineage2.1;lineage4.9 1
lineage4.1.1.3 1
lineage4.4.1.1 1
lineage1.2.1.2 1
lineage4.3.4.1 1
lineage4.1.1.3;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 149
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR25827418 XDR-TB lineage3.1;lineage9 None
SRR1173568 Sensitive lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
ERR4798099 HR-TB lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR3675270 Other lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR3675473 Sensitive lineage4.9 None
ERR387051 RR-TB lineage4.9 None
ERR2512770 Sensitive lineage4.2.1 None
SRR5341384 HR-TB lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR323066 HR-TB lineage4.9 None
ERR124636 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR4811031 Other lineage4.5 None
SRR15014655 Other M.canetti;lineage1 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR3675280 RR-TB lineage4.9 None
ERR323062 HR-TB lineage4.9 None
ERR751326 Other lineage4.9 None
ERR9786525 RR-TB lineage4.1;lineage4.8 None
ERR176751 HR-TB lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR5341425 Other lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR7821163 Other lineage2.2.1 None
ERR2446382 Other lineage4 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR12708416 Sensitive None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR4821686 Sensitive lineage4.1.2.1 None
ERR4816466 HR-TB lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
SRR6046245 Other lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR6046593 Other lineage4.9 None
ERR400336 Sensitive lineage4.9 None
SRR6046382 RR-TB lineage2.2.1 None
SRR6511621 HR-TB lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR3273109 HR-TB lineage4 None
SRR3675585 HR-TB lineage4.9 None
SRR12708384 Sensitive lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
SRR5341296 Sensitive lineage4.9 None
ERR4812155 Other lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
SRR1158918 Other lineage4.9 None
SRR1180137 RR-TB lineage2.2.1 None
ERR4769452 Other lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
ERR736834 HR-TB lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR2513283 Sensitive lineage5.1.4 None
SRR5341469 HR-TB lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR6045053 Other lineage4 None
ERR1063896 HR-TB None
ERR9786843 Other None
ERR212001 HR-TB None
ERR137286 Other lineage4.9 None
ERR4797474 Other lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR736872 HR-TB lineage4.9 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR1175496 Sensitive lineage4.9 None
SRR6046046 Other lineage4.9 None
ERR3275450 Other lineage4 None
ERR702405 HR-TB lineage4.9 None
ERR7911519 MDR-TB lineage2.2.1 vn
ERR212033 Other lineage4.9 None
SRR1159378 Other lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR6046878 Other lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
ERR6866639 HR-TB lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR3675455 Sensitive lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR990545 RR-TB lineage3 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR26399490 Sensitive lineage4.9 None
SRR11662694 Other lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SRR5341308 HR-TB lineage4.9 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
SRR10315567 HR-TB lineage2.2.1 None
ERR4811030 Other lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR400326 Other lineage4.9 None
ERR1035122 HR-TB lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
SRR3675522 Other lineage4.9 None
SRR5341387 Other lineage4.9 None
SRR3675235 HR-TB lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
SRR12006550 Other lineage1.2.1.2 None
ERR4796254 Other lineage4.9 None
SRR9971112 HR-TB lineage2.2.1 None
SRR3675387 Other lineage4.9 None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR12416842 HR-TB lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
SRR3675246 Other lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
SRR1165628 Other La3;lineage4.9 None
SRR5341455 Sensitive lineage4.9 None
ERR4797184 HR-TB lineage4.9 None
SRR3675456 RR-TB lineage4.9;lineage7 None
SRR6044819 Sensitive lineage4.9 None
SRR3675247 Other lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR5341467 Other lineage4.9 None
ERR4819809 HR-TB lineage4.6.2.2 None
ERR2517475 Other lineage4 None
ERR502510 HR-TB lineage4.9 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR736856 HR-TB lineage4.9 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR502511 HR-TB lineage4.9 None