Rv3457c - c.-254G>C


Drug resistance types
8 Sensitive 2 RR-TB 47 HR-TB 15 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 119 Other
lineage Counts
lineage Count
19
La1.6;lineage4 1
lineage4.9 36
lineage4.9;lineage6.3 7
lineage2.1;lineage6.3 2
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9 13
La3;lineage4.8 1
lineage1.1.2 1
lineage6.3.1 1
La3;lineage2.1;lineage4.9 2
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.8 6
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La3;lineage1.1.2 1
lineage3 1
lineage2.1 5
lineage1.1;lineage4 1
lineage4 3
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.1.3 2
lineage2.1;lineage4.3.2;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.1.2.1 11
lineage2.2.1 6
lineage2.1;lineage4.9;lineage6.3 9
La3;lineage2 1
lineage4.8.1 1
lineage4.1.2 1
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage4.3.4.2.1 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage4.1.1.3 4
M.canetti;lineage2.1;lineage4.9 2
lineage2.2.1.1 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage2.2 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage2.2.1;lineage6.3 1
lineage4.4.1.1 1
lineage3.1 1
lineage4.1.1.1 2
La1.7;M.canetti;lineage4.9 1
lineage4.3.3 2
La1.7.1;lineage4.9 1
lineage4.6.2.2 3
M.canetti;lineage4.9 2
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
M.canetti;lineage2.1;lineage6.3 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La3;lineage4.9 1
La3;lineage2.1;lineage6.3 1
lineage3.1.2.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2.2.1 1
lineage4.7 1
lineage4.3.3;lineage4.3.4.1 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.2.BCG;La1.8.1 1
La1.6;La3;lineage4.9 1
lineage1.1.2;lineage4.1.2.1;lineage4.1.3 1
La3 2
lineage4.3.4.1 1
lineage4.2;lineage4.6.3;lineage4.9 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage6.1.3 1
lineage4.6.3;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 194
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1184381 MDR-TB None
SRR1184372 MDR-TB None
SRR18213713 HR-TB None
SRR28351554 Other La1.6;lineage4 None
ERR4407463 HR-TB None
SRR1196768 MDR-TB None
ERR4817060 Other None
SRR1196583 Other lineage4.9 None
ERR1035157 Other lineage4.9 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR4817893 Other La3;lineage4.8 None
SRR25827687 MDR-TB lineage1.1.2 None
ERR9787139 Other lineage6.3.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9786619 Sensitive lineage4.8 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4816466 HR-TB lineage4.9 None
ERR9896144 Other lineage3 None
ERR702406 Other lineage2.1 None
ERR4819322 Other lineage1.1;lineage4 None
ERR3283044 Other lineage4 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
SRR1184294 Other lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
SRR6458423 HR-TB lineage2.2.1 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR20969677 HR-TB La3;lineage2 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR4818347 Other lineage4.1.2 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4815752 Other lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR11466146 Other lineage4.3.4.2.1 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR7131023 Other lineage4.1.2.1 None
ERR9786682 Other lineage4.1.2.1 None
SRR7496509 Other None
ERR9786604 Other None
ERR4815604 Other None
ERR9117709 Other None
SRR6789626 Other None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
ERR550636 MDR-TB lineage4.1.1.3 None
SRR3675549 Other lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
ERR11465025 Other lineage4.1.1.3 None
SRR6079962 HR-TB lineage2.2.1.1 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR4817735 Other lineage4.8 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
SRR1169194 Other lineage4.9 None
ERR176549 Other lineage4.3.4.2.1 None
SRR1196677 Other lineage2.2 None
ERR9786569 Other lineage4.8 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675312 Sensitive lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6046066 Other lineage4.9 None
ERR2027263 Other lineage4 None
ERR502912 Other lineage2.2.1 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR1184346 HR-TB lineage3.1 None
SRR1173400 Other lineage4.9 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4815441 HR-TB lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR3797070 Other lineage4.9 None
SRR3675221 Other lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
SRR1196566 Other lineage4.9 None
SRR21732980 Other lineage4.3.3 None
ERR4819877 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR3801503 Other lineage4.6.2.2 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR3804155 Other lineage4.1.2.1 None
ERR3283042 HR-TB lineage4.9 None
ERR11049020 Other lineage4.8 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR1172234 Other lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
SRR1196546 Other lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR3416776 Other lineage2.1 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR9786601 Other lineage4.1.2.1 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR3283018 HR-TB lineage4.9 None
ERR4819241 Other lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
SRR6045233 Other M.canetti;lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786642 Other lineage4.1.2.1 None
SRR3675572 Other None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR9786671 Other None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR234659 HR-TB None
ERR2514692 Other None
SRR1172857 Other None
SRR3675236 Other None
ERR4816999 Other None
SRR28119777 Other lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3675275 Other lineage4.9 None
ERR2514390 Sensitive lineage3.1.2.1;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR1710057 Other lineage2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR18003019 Other lineage2.2.1 None
ERR4819932 Other lineage4.7 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR4820773 HR-TB lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR9786508 Sensitive lineage4.3.3;lineage4.3.4.1 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR2229084 Sensitive lineage4.8 dk
SRR6046225 Other lineage4.9;lineage6.3 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR9786627 Other lineage4.1.2.1 None
SRR6045526 Other lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR3675248 Other lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1165699 Other lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR21690574 Other lineage4.1.2.1 None
ERR11466174 Other lineage4.8 None
ERR4816100 Sensitive lineage1.1.2;lineage4.1.2.1;lineage4.1.3 None
SRR1172728 RR-TB La3 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR9787153 Other lineage6.1.3 None
SRR12416840 MDR-TB lineage4.9 None
ERR9786711 Other lineage4.6.2.2 None
SRR1172817 Other La3 None
ERR11465024 Other lineage4.1.1.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR25827507 MDR-TB lineage4.1.1.1 None