Rv3596c - c.2313C>T


Drug resistance types
9 Sensitive 2 RR-TB 93 HR-TB 14 MDR-TB 10 Pre-XDR-TB 0 XDR-TB 104 Other
lineage Counts
lineage Count
117
lineage4.3.4.1;La1.7 1
lineage4 11
lineage4.9 11
lineage4.1.2.1 11
lineage4.1.3 2
lineage2 3
La1.2 1
lineage2.2.1 13
lineage1.2.2.2 2
lineage3 3
lineage2.2 9
lineage4.6.1.1 1
lineage4.3.4.2.1 2
lineage4.3.2.1 1
lineage4.1 1
lineage1.1.2 2
lineage4.3.2 1
lineage4.8 2
lineage4.1.1 2
lineage4.6.2.2 1
lineage6.3.1 1
lineage6 1
La3 1
lineage2.2.1.2 1
lineage4.3.3 4
lineage2.2.1.1 2
lineage3.1 2
lineage1.2.1.2 1
lineage4.3.4.1 1
lineage2.1 2
La1.7.1 1
lineage4.5 1
lineage9;lineage3.1 1
lineage4.2;La1.7 1
lineage4.9;La3 1
lineage6.3;lineage2.2.1 1
lineage4.1.1.1 1
lineage3;lineage2.2.1 1
lineage4.3 1
La1.8.1 1
lineage4.4.1.1 2
lineage4.8;La3 1
lineage4;lineage1.1 1
lineage4.9;lineage3.1.2.1 1
lineage4.7 1
lineage4.2.1 1
lineage4.2.1.1 1
lineage4.1.1.3 1
spoligotype Counts
spoligotype Count
None 232
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR3283036 HR-TB None
ERR3283027 HR-TB None
ERR133986 HR-TB None
ERR11465802 Other lineage4.3.4.1;La1.7 None
ERR3445504 HR-TB None
ERR3283055 HR-TB None
ERR3439432 Other None
ERR3445502 HR-TB lineage4 None
ERR3445501 HR-TB None
ERR3797046 HR-TB None
ERR3797058 Other lineage4.9 None
ERR405209 Sensitive lineage4 None
ERR403298 HR-TB lineage4 None
ERR3797069 Other None
ERR3804155 Other lineage4.1.2.1 None
ERR3804169 HR-TB lineage4.1.3 None
ERR4769450 HR-TB None
ERR4407463 HR-TB None
ERR4769452 HR-TB None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4769497 HR-TB La1.2 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4798406 HR-TB None
ERR4797201 Other lineage1.2.2.2 None
ERR4797285 MDR-TB lineage1.2.2.2 None
ERR4800341 Other lineage3 None
ERR4799025 Pre-XDR-TB None
ERR4799513 HR-TB lineage2.2 None
ERR4810624 HR-TB lineage2.2 None
ERR4811022 HR-TB None
ERR4810741 HR-TB None
ERR4811493 HR-TB None
ERR4811105 HR-TB None
ERR4811142 MDR-TB None
ERR6358755 Other lineage4.6.1.1 None
ERR5336148 Other None
ERR702406 HR-TB None
ERR702404 HR-TB None
ERR736867 HR-TB None
ERR736874 HR-TB None
ERR176549 Other lineage4.3.4.2.1 None
ERR7911670 Pre-XDR-TB lineage2.2 None
ERR8975532 HR-TB lineage4.3.2.1 None
ERR9786440 Other lineage4.1 None
ERR9786421 Other lineage4.1.2.1 None
ERR9117709 HR-TB None
ERR9117721 HR-TB lineage1.1.2 None
ERR9117805 Other lineage4.3.2 None
ERR9786569 Other lineage4.8 None
ERR9786604 Other None
ERR9786617 Other lineage4.1.1 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786642 Other lineage4.1.2.1 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786627 Other lineage4.1.2.1 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786694 Other lineage4.1.2.1 None
ERR9786671 Other None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR9786682 Other lineage4.1.2.1 None
ERR9787197 Other None
ERR9787139 Other lineage6.3.1 None
ERR9787165 Other lineage6 None
SRR1172728 MDR-TB None
ERR9896144 Other lineage3 None
ERR990545 Other lineage3 None
SRR1169306 Other None
SRR1172234 Other None
SRR1167384 Other lineage4 None
SRR1169194 Other None
SRR1169249 Other La3 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1173562 HR-TB lineage4 None
SRR1172857 MDR-TB None
SRR1173153 HR-TB None
SRR1173330 Pre-XDR-TB lineage4 None
SRR1173400 Other None
SRR1172817 HR-TB None
SRR1172951 Other None
SRR1173218 Pre-XDR-TB lineage4.3.3 None
SRR1173363 HR-TB None
SRR1173384 Other lineage4 None
SRR1173706 Other lineage4.9 None
SRR1173633 HR-TB lineage4.9 None
SRR1173629 Other None
SRR1175049 RR-TB None
SRR1173788 Other None
SRR1173778 Other None
SRR1180137 Other lineage2.2.1 None
SRR1175074 MDR-TB None
SRR1180147 Other lineage2.2.1.1 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR1181289 Other lineage2.2.1 None
SRR1183049 Other lineage2.2 None
SRR1183106 Other lineage2.2.1.1 None
SRR1184294 HR-TB None
SRR1181020 Other lineage2.2.1 None
SRR1183145 Other lineage2.2.1 None
SRR1184372 MDR-TB None
SRR1184312 HR-TB lineage2.2.1 None
SRR1184346 HR-TB lineage3.1 None
SRR1196474 HR-TB lineage3.1 None
SRR1184380 HR-TB None
SRR1184388 Other None
SRR1184381 MDR-TB None
SRR1196494 MDR-TB None
SRR12142341 HR-TB None
SRR1196566 HR-TB None
SRR12006550 Other lineage1.2.1.2 None
SRR1196546 HR-TB None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR1196677 HR-TB lineage2 None
SRR1196768 MDR-TB None
SRR12416840 MDR-TB lineage4.9 None
SRR25827687 MDR-TB lineage1.1.2 None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR13837525 Sensitive lineage4.9 None
SRR15368973 Other None
SRR1710057 Other lineage2.1 None
SRR12416824 HR-TB None
SRR14782405 HR-TB None
SRR14801749 Sensitive None
SRR1792478 HR-TB La1.7.1 None
SRR18003019 Other lineage2.2.1 None
SRR18213713 HR-TB lineage4.5 None
SRR20969677 HR-TB lineage2 None
SRR19303884 HR-TB None
SRR19304036 HR-TB None
SRR20969708 HR-TB lineage2.2 None
SRR25827418 Pre-XDR-TB lineage9;lineage3.1 None
SRR20970016 Other lineage2.2 None
SRR25827682 Other None
SRR21732980 Other lineage4.3.3 None
SRR22424787 Sensitive lineage4.9 None
SRR23961559 Other lineage4.2;La1.7 None
SRR26399973 Other lineage4.9;La3 None
SRR26159043 Other lineage4.9 None
SRR28119811 Other lineage6.3;lineage2.2.1 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR3675465 HR-TB None
ERR176751 HR-TB None
ERR4815604 HR-TB None
ERR176793 Other lineage4.1.1 None
SRR25827497 Pre-XDR-TB lineage3;lineage2.2.1 None
SRR3675222 Other None
ERR158583 HR-TB None
ERR4814352 HR-TB lineage2.2.1 None
SRR3675488 HR-TB None
SRR3416776 Other lineage2.1 None
SRR3675221 HR-TB None
ERR176568 Other lineage4.3 None
SRR3675270 HR-TB None
SRR3675236 HR-TB None
SRR3675502 Other None
SRR3675501 HR-TB None
ERR176643 HR-TB None
SRR3675311 Other None
ERR2229542 Other lineage4.8 None
ERR4816999 Other None
ERR2027263 Other lineage4 None
SRR3675550 Other None
ERR4817060 RR-TB None
ERR212033 HR-TB None
ERR4818615 Other None
SRR3675572 Other None
ERR4816585 Other lineage2.2 None
ERR502912 Other lineage2.2.1 None
ERR4818021 Other La1.8.1 None
ERR234659 HR-TB None
SRR3675574 HR-TB None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR3742665 HR-TB None
ERR4817893 Other lineage4.8;La3 None
ERR4820854 Other lineage4.1.2.1 None
ERR4819322 Other lineage4;lineage1.1 None
SRR5341333 HR-TB None
SRR5341302 HR-TB None
SRR5341418 Other None
ERR2514390 Sensitive lineage4.9;lineage3.1.2.1 None
ERR4819781 Other lineage2.2.1 None
ERR2514692 Other None
ERR4819932 Other lineage4.7 None
SRR6045503 HR-TB None
SRR5341456 Other None
SRR5535933 HR-TB None
SRR6045526 HR-TB None
ERR4821578 Other lineage4.1.2.1 None
SRR6045519 HR-TB None
SRR6044838 Other lineage4.9 None
SRR6044790 HR-TB None
SRR6045053 Other None
SRR6044855 Other lineage4.9 None
SRR6045217 Other lineage4 None
SRR6046066 HR-TB None
SRR6045327 HR-TB None
SRR6046046 Other None
ERR4830353 Other None
SRR6045399 Other None
SRR6046305 Other lineage4.9 None
SRR6046362 HR-TB None
SRR6046299 HR-TB None
SRR6046492 Other None
SRR6046482 HR-TB None
SRR6046460 HR-TB None
SRR6046878 HR-TB lineage4 None
SRR6046521 Other lineage4.4.1.1 None
SRR6046540 HR-TB None
SRR6046824 HR-TB None
SRR6458423 HR-TB lineage2.2.1 None
ERR4831117 HR-TB None
SRR6789626 Other None
SRR6785262 Sensitive lineage4.2.1 None
SRR6832249 Other lineage2.2.1 None
ERR4831545 Pre-XDR-TB lineage2.2 None
ERR4831546 HR-TB lineage2.2 None
ERR11466146 Other lineage4.3.4.2.1 None
SRR6832178 HR-TB lineage4.2.1.1 None
ERR502889 Other None
ERR502532 HR-TB None
ERR502908 HR-TB lineage2.2.1 None
SRR8217918 HR-TB None
SRR7131023 Other lineage4.1.2.1 None
SRR7496471 Sensitive None
SRR7496517 Other None
SRR7496509 Other None
ERR323108 HR-TB lineage4 None
ERR11465025 Other lineage4.1.1.3 None
SRR7535086 Other None
ERR323043 HR-TB None
ERR1034652 Other None
ERR067681 HR-TB None
ERR1035157 Other lineage4.9 None