EBG00000313339 - n.442G>A


Drug resistance types
22 Sensitive 4 RR-TB 49 HR-TB 23 MDR-TB 11 Pre-XDR-TB 2 XDR-TB 150 Other
lineage Counts
lineage Count
lineage4.1.1.3 7
lineage2.2.1 18
lineage4.1.2.1 13
20
lineage2.1 3
lineage4.9;lineage6.3 7
La3;lineage4.9 6
lineage2.1;lineage4.9 12
lineage4.9 63
lineage4.8 10
lineage2.1;lineage4.9;lineage6.3 8
La3;lineage2.1;lineage6.3 1
lineage4.3.3 5
La3;lineage2.1;lineage4.9 3
lineage4.3.4.2.1 3
M.canetti;lineage2.2.2;lineage6.2 2
lineage2.1;lineage6.3 1
lineage3 7
La3;lineage2.2.2 2
M.canetti;lineage4.9 1
lineage4.6.2.2 5
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.3.2.1 1
lineage1.2.2.2 2
lineage4.1.1.1 4
lineage4 5
lineage5.2 2
lineage4.3.4.1 2
La1;lineage4.1.2 1
La3;lineage4.8 1
lineage6.1.3 2
La1.2.BCG 1
M.canetti;lineage2.2 2
lineage4.1;lineage4.8 2
lineage1.2.1.2 1
lineage2.2 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La3;lineage2.2.1 1
La3 2
lineage4.1.3 2
lineage1.1.2 2
lineage3.1 1
lineage4.6.3;lineage4.9 1
La1.7;M.canetti;lineage4.9 1
lineage4.7 1
La3;lineage2.1;lineage4.9;lineage6.3 3
lineage4.6.1.1 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage6.3.1 1
La3;M.canetti;lineage2.2.1 1
La3;lineage2 1
M.canetti;lineage2.1;lineage4.9 2
lineage4.1.2 1
La3;lineage3 1
lineage4.1.2.1.1 1
lineage2.2.1;lineage6.3 1
lineage3.1.1 1
lineage2.2.2;lineage4 1
La1;lineage4.9 1
La1.2 1
lineage4.8.1 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La1.7;lineage4.2 1
lineage2.2.1.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 261
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR11465024 Other lineage4.1.1.3 None
ERR502908 HR-TB lineage2.2.1 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR12142341 HR-TB lineage2.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR1167384 Other La3;lineage4.9 None
SRR1173363 Other None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR3283042 Other lineage4.9 None
SRR22249687 Sensitive lineage4.8 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR10808668 Sensitive lineage2.2.1 None
SRR1196583 Other lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR1173788 Sensitive lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR550637 MDR-TB lineage4.1.1.3 None
ERR9786682 Other lineage4.1.2.1 None
SRR1173355 Other lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR9786627 Other lineage4.1.2.1 None
SRR5341332 Pre-XDR-TB lineage3 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR15368973 Other lineage4.9 None
SRR29093099 MDR-TB La3;lineage2.2.2 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR1035157 Other lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR28119753 Other lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR3675248 Other lineage4.9 None
ERR13245558 MDR-TB La3;lineage2.2.2 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR1196546 Other lineage4.9 None
SRR12708411 HR-TB lineage1.2.2.2 None
ERR553132 MDR-TB lineage4.1.2.1 None
ERR11466174 Other lineage4.8 None
ERR176793 Other lineage4.1.1.1 None
ERR3283044 Other lineage4 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR11465025 Other lineage4.1.1.3 None
ERR4872094 MDR-TB lineage5.2 None
ERR4816478 HR-TB lineage4 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR4816656 Other lineage4.9 None
SRR3675549 Other lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR11466499 Other lineage4.3.4.1 None
SRR9970978 Sensitive La1;lineage4.1.2 None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
ERR176751 Other lineage4.9 None
ERR12015083 Other La3;lineage4.8 None
SRR9971113 Other lineage2.2.1 None
ERR9787153 Other lineage6.1.3 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR2229542 Other lineage4.8 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4407452 Other lineage3 None
SRR28119752 Other lineage4.9 None
SRR29016780 Other lineage4.9 None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR9786645 Other lineage4.6.2.2 None
ERR11068570 Other lineage4 None
SRR7496472 Other lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR502912 Other lineage2.2.1 None
ERR4800527 MDR-TB lineage2.2.1 None
SRR7131023 Other lineage4.1.2.1 None
ERR3797070 Other lineage4.9 None
ERR9786843 Other None
SRR1184381 MDR-TB None
SRR3675221 Other lineage4.9 None
SRR28351341 Other lineage4.1.1.1 None
SRR25827682 Other None
ERR212001 HR-TB None
ERR9787197 Other None
ERR234659 Other None
ERR245716 Sensitive lineage2.2.1 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1173153 Other lineage4.9 None
SRR21690574 Other lineage4.1.2.1 None
ERR176549 Other lineage4.3.4.2.1 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR9786421 Other lineage4.1.2.1 None
ERR4797474 Sensitive lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR1181289 Other lineage2.2.1 None
SRR1184372 MDR-TB None
SRR12006550 Sensitive lineage1.2.1.2 None
ERR9786604 Other None
SRR1165667 Other lineage4.9;lineage6.3 None
ERR4815752 Other lineage4.9 None
SRR3675572 Other None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR4819241 Other lineage4.9 None
SRR1172951 Other lineage4.9 None
SRR1180137 Other lineage2.2.1 None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
SRR1183049 RR-TB lineage2.2 None
SRR18003019 Other lineage2.2.1 None
ERR4820773 HR-TB lineage4.9 None
ERR6358979 Other lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR17658565 Pre-XDR-TB lineage3 None
SRR1165628 Other La3;lineage4.9 None
SRR1196494 MDR-TB None
SRR1169249 Other lineage4.9 None
SRR1184312 Other lineage2.2.1 None
ERR11138607 Pre-XDR-TB lineage2.2.1 None
SRR5341384 HR-TB lineage4.9 None
SRR1173384 Other lineage4.9 None
ERR2027263 Other lineage4 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6511621 Sensitive lineage4.9 None
SRR29093909 Other lineage4.9 None
ERR3273109 HR-TB lineage4 None
SRR3675524 Other lineage4.9;lineage6.3 None
SRR29017461 Other La3;lineage4.9 None
SRR7535086 Other None
ERR9786619 Sensitive lineage4.8 None
ERR11081258 Other lineage4.8 None
ERR4819877 HR-TB lineage4.9 None
ERR11049020 Other lineage4.8 None
ERR4797201 Other lineage1.2.2.2 None
ERR4817731 HR-TB lineage4.9 None
ERR4800341 Other lineage3 None
SRR5341453 Other lineage4.9 None
SRR1172728 RR-TB La3 None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR9786611 HR-TB lineage4.1.3 None
SRR1172817 Other La3 None
SRR1173400 Other lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
SRR7496509 Other None
ERR736867 Other lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR13591342 HR-TB lineage4.1.1.3 None
SRR1184346 HR-TB lineage3.1 None
ERR736834 Sensitive lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6046225 Other lineage4.9;lineage6.3 None
ERR3283018 HR-TB lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR7496523 Other lineage4.7 None
SRR1173633 Other lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
SRR1196566 Other lineage4.9 None
SRR21732980 Other lineage4.3.3 None
SRR3675232 Other lineage4.1.2.1 None
SRR25827507 MDR-TB lineage4.1.1.1 None
ERR4407463 HR-TB None
ERR9786694 Other lineage4.1.2.1 None
ERR9787165 Other lineage6.1.3 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1173778 Other lineage4.9 None
SRR1196768 MDR-TB None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786569 Other lineage4.8 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR11252736 Other lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9787139 Other lineage6.3.1 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR1063896 Sensitive None
ERR2199988 MDR-TB lineage4.1.1.3 None
SRR20969677 HR-TB La3;lineage2 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1175074 Other None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR550636 MDR-TB lineage4.1.1.3 None
SRR25827687 MDR-TB lineage1.1.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR11972306 Pre-XDR-TB lineage2.2.1 None
SRR28119741 Pre-XDR-TB lineage2.2.1 None
SRR9970980 HR-TB lineage4.1.2 None
SRR1169194 Other lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1196677 Other lineage2.2 None
ERR9896144 Other lineage3 None
SRR1173218 Other lineage4.3.3 None
ERR1023302 MDR-TB La3;lineage3 None
ERR11466146 Other lineage4.3.4.2.1 None
SRR3675448 Other lineage4.9 None
ERR4972483 Pre-XDR-TB lineage4.1.2.1.1 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR11081257 Other lineage4.8 None
SRR6046133 HR-TB lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR13423649 Sensitive lineage2.2.1 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SRR6789626 Other None
ERR9786617 Other lineage4.1.1.1 None
ERR4797184 Sensitive lineage4.9 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR124636 Sensitive lineage4.9 None
SRR1196474 Other lineage3.1.1 None
SRR29093105 Other lineage2.2.2;lineage4 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
ERR9786443 Sensitive lineage4.8 None
ERR990545 Other lineage3 None
SRR1165699 Other lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR13267017 Pre-XDR-TB lineage2.2.1 None
SRR28119777 Other lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR12416842 HR-TB lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR13986562 Other La1.2 None
ERR176643 Other La3;lineage4.9 None
ERR702406 Other lineage2.1 None
SRR1172234 Other lineage4.9 None
SRR9970979 Sensitive lineage4.8 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR23961559 Other La1.7;lineage4.2 None
SRR3675311 Other lineage4.9 None
SRR1184294 Other lineage4.9 None
SRR6079962 HR-TB lineage2.2.1.1 None
ERR3804155 Other lineage4.1.2.1 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9119500 MDR-TB lineage5.2 None
ERR9786642 Other lineage4.1.2.1 None
SRR1173118 Other lineage2.2.1 None
ERR11252612 Other La3;lineage4.9 None
SRR28044634 Other lineage3 None
SRR5341387 Other lineage4.9 None
SRR1172857 Other None
ERR212033 Other lineage4.9 None
SRR28119805 Other lineage4.9 None
SRR6789621 Other lineage4.9 None