Rv3596c - c.1497C>G
Drug resistance types
114 Sensitive
4 RR-TB
140 HR-TB
13 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
70 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 18 |
| lineage2.2 | 6 |
| lineage4.5 | 2 |
| 100 | |
| lineage4.1.2.1 | 20 |
| lineage4 | 77 |
| lineage4.3.4 | 2 |
| lineage4.3.2 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.6.2.2 | 2 |
| lineage3 | 7 |
| lineage4.1.1.3 | 3 |
| lineage2.2.1.2 | 2 |
| lineage4.4.1.1 | 1 |
| lineage4.9 | 64 |
| lineage4.3.4.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| La1.7.1 | 1 |
| lineage4.4.2 | 2 |
| lineage4.1 | 4 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage3.1.3 | 1 |
| lineage4;lineage1.1.2 | 1 |
| lineage4.9.1 | 1 |
| lineage1.1.2 | 2 |
| lineage4.1.1.2 | 1 |
| lineage5.1.4 | 1 |
| lineage4.8 | 2 |
| lineage4.2.1 | 2 |
| lineage1.1 | 1 |
| lineage3.1 | 2 |
| lineage4.1.2 | 1 |
| lineage4.4.1.2 | 1 |
| La1 | 2 |
| La1.8.1 | 4 |
| lineage5.1.2 | 1 |
| lineage4;lineage3.1 | 1 |
| La1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 346 |
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR5865388 | MDR-TB | lineage2.2.1 | None | ERR4812155 | Sensitive | None | ERR4811030 | Sensitive | None | ERR6358837 | HR-TB | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6866547 | Sensitive | lineage4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6865502 | Sensitive | lineage4 | None | ERR6866410 | Sensitive | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR6866807 | HR-TB | lineage4 | None | ERR702404 | HR-TB | None | ERR736839 | Other | None | ERR736848 | HR-TB | None | ERR752229 | Other | lineage4.5 | None | ERR736875 | HR-TB | lineage4 | None | ERR9634265 | Sensitive | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR8976043 | HR-TB | None | ERR9119669 | HR-TB | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR9896144 | Other | lineage3 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1165423 | Other | lineage4.1.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1165306 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR13837519 | Sensitive | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR13861153 | Other | lineage4.9 | None | SRR13837631 | Sensitive | lineage4.9 | None | SRR13861564 | Sensitive | lineage4.9 | None | SRR13861528 | HR-TB | lineage4.9 | None | SRR13861553 | Sensitive | lineage4.9 | None | SRR13861397 | HR-TB | lineage4.9 | None | SRR13861415 | Other | lineage4.9 | None | SRR13861434 | RR-TB | lineage4.9 | None | SRR13861671 | Sensitive | lineage4.9 | None | SRR13861573 | Other | lineage4.9 | None | SRR1510066 | Other | lineage1.2.1.2.1 | None | SRR14782405 | HR-TB | None | SRR14801749 | Sensitive | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR1640750 | HR-TB | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR8692782 | Other | lineage4.9 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR8692807 | Other | lineage4.9 | None | SRR8692879 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR8692776 | Other | lineage4.9 | None | SRR3675455 | Sensitive | lineage4 | None | SRR8692887 | Other | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR176778 | HR-TB | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR176779 | HR-TB | None | SRR3675477 | Other | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | ERR4814396 | Sensitive | lineage4.1.1.3 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675486 | HR-TB | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR181744 | HR-TB | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR3675229 | Other | lineage4 | None | SRR3675247 | Other | lineage4.9 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR3675270 | HR-TB | None | SRR3675280 | HR-TB | lineage4.9 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | SRR3675279 | Other | None | SRR3675283 | Sensitive | lineage4.9 | None | ERR176651 | HR-TB | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675318 | Other | lineage4.9 | None | SRR3675387 | Sensitive | None | ERR181887 | HR-TB | None | SRR3675383 | HR-TB | None | SRR3675456 | HR-TB | None | SRR3675510 | Other | None | SRR3675522 | Other | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675537 | Sensitive | lineage4.9 | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR3275220 | Other | lineage3 | nl | SRR3675542 | Other | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675545 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | SRR3675555 | HR-TB | None | SRR3675558 | HR-TB | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR212138 | HR-TB | lineage4 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR4816466 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR4817998 | Other | lineage3 | None | ERR245758 | Other | lineage4.9.1 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818252 | Other | lineage4.1.1.2 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR2513283 | Other | lineage5.1.4 | None | ERR2514327 | HR-TB | lineage4.8 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None | ERR2509673 | Other | lineage2.2.1 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR2446144 | Other | lineage3 | nl | SRR5341396 | Other | lineage4 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341330 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341456 | Other | None | ERR2693238 | HR-TB | lineage4.9 | None | ERR2517528 | Other | lineage3 | nl | ERR4821053 | Other | lineage3 | None | ERR2693239 | HR-TB | None | SRR6045503 | HR-TB | None | SRR5535933 | HR-TB | None | ERR4821655 | Sensitive | lineage4 | None | ERR4821179 | Other | lineage4.1.2.1 | gb | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045892 | Sensitive | None | SRR6045217 | Other | lineage4 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045053 | Other | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046046 | Other | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6325442 | HR-TB | None | ERR278594 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | ERR2446563 | Other | lineage2.2.1 | nl | SRR6046492 | Other | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | SRR6325444 | HR-TB | None | ERR3275196 | Other | lineage2.2.1 | nl | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR6325447 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6046802 | Other | lineage4 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6046878 | HR-TB | lineage4 | None | SRR6046897 | Sensitive | lineage4 | None | ERR294248 | HR-TB | None | ERR323036 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | ERR4831739 | MDR-TB | lineage2.2.1 | None | ERR4831638 | Sensitive | None | ERR4831718 | MDR-TB | lineage2.2.1 | vn | SRR6789624 | MDR-TB | lineage4.1 | None | ERR502943 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR5311081 | HR-TB | None | ERR5311099 | HR-TB | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR323038 | HR-TB | None | SRR9971114 | Other | lineage2.2.1 | None | ERR323041 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323045 | HR-TB | None | ERR323055 | HR-TB | None | ERR323107 | Other | lineage4 | None | ERR323063 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR067699 | HR-TB | lineage4 | None | DRR188519 | Other | lineage4.4.2 | None | ERR323108 | HR-TB | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1063857 | HR-TB | None | ERR1034634 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR133825 | Sensitive | lineage4 | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1063862 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR3283017 | HR-TB | None | ERR3283028 | Other | None | ERR3283025 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3468544 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3283047 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3445504 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349264 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349299 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR3797046 | HR-TB | None | ERR373945 | HR-TB | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797016 | HR-TB | None | ERR3797019 | Other | La1.8.1 | None | ERR373946 | Sensitive | lineage4 | None | ERR3797015 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797043 | HR-TB | None | ERR3797067 | Other | La1.8.1 | None | ERR3797048 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797083 | HR-TB | None | ERR3797063 | HR-TB | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR3797082 | Other | lineage4.9 | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797086 | Other | lineage4.9 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR3797087 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR387051 | HR-TB | None | ERR400320 | Sensitive | lineage4 | None | ERR405209 | Sensitive | lineage4 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4188247 | HR-TB | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769452 | HR-TB | None | ERR4188350 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769450 | HR-TB | None | ERR4796929 | Sensitive | lineage4 | None | ERR4769521 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4799025 | Pre-XDR-TB | None | ERR4797313 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4798262 | HR-TB | La1 | None | ERR4798431 | HR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None |
|---|
