Rv3596c - c.1497C>G


Drug resistance types
118 Sensitive 4 RR-TB 140 HR-TB 12 MDR-TB 5 Pre-XDR-TB 0 XDR-TB 70 Other
lineage Counts
lineage Count
lineage4.9 65
lineage4.1 4
100
lineage4 77
lineage4.1.1.3 3
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage3;lineage2.1 1
lineage4.3.4 2
lineage1.2.1.1 1
lineage4.3.4.2.1 4
lineage2.2.1 17
lineage4.1.2.1 21
lineage4;lineage1.1.2 1
lineage3 7
lineage3.1.3 1
lineage4.1.1.2 1
lineage1.1.2 2
lineage4.2.1 2
lineage4.8 2
lineage5.1.4 1
lineage1.1 1
lineage3.1 2
lineage4.1.2 1
lineage4.4.1.2 1
lineage4.4.2 2
lineage2.2 6
La1 2
La1.8.1 4
lineage4.6.2.2 2
lineage5.1.2 1
lineage4;lineage3.1 1
La1.2 1
lineage4.5 2
lineage4.9.1 1
lineage4.3.2 1
lineage4.1.2.1.1 1
lineage1.1.3.1 1
lineage2.2.1.2 2
lineage4.4.1.1 1
lineage4.3.4.1 1
La1.7.1 1
lineage1.2.1.2.1 1
spoligotype Counts
spoligotype Count
None 349
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR8692782 Other lineage4.9 None
SRR12708416 Sensitive lineage4.1 None
SRR8692807 Other lineage4.9 None
SRR8692879 HR-TB lineage4.9 None
SRR8692887 Other None
SRR8692776 Other lineage4.9 None
SRR3675472 Sensitive lineage4.9 None
SRR3675473 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4 None
SRR3675464 HR-TB lineage4.1 None
ERR176778 HR-TB None
ERR4814396 Sensitive lineage4.1.1.3 None
SRR3675477 Other lineage4.9 None
ERR176779 HR-TB None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
SRR3675482 HR-TB None
ERR161033 HR-TB None
ERR4814536 MDR-TB lineage3;lineage2.1 None
ERR161039 Sensitive lineage4.3.4 None
SRR3675486 HR-TB None
SRR3675266 Sensitive lineage4.9 None
SRR3675209 Sensitive lineage4.9 None
SRR3675210 Sensitive lineage4.9 None
SRR3675229 Other lineage4 None
ERR4814734 Other lineage1.2.1.1 None
SRR3675247 Other lineage4.9 None
ERR181744 HR-TB None
ERR181824 HR-TB lineage4 None
SRR3675265 Other lineage4 None
SRR3675280 HR-TB lineage4.9 None
SRR3675270 HR-TB None
ERR176580 Sensitive lineage4.3.4.2.1 None
SRR3675514 Sensitive lineage4.9 None
SRR3675284 HR-TB lineage4.9 None
SRR3675292 Sensitive lineage4 None
ERR181887 HR-TB None
SRR3675383 HR-TB None
SRR3675456 HR-TB None
SRR3675510 Other None
SRR3675279 Other None
SRR3675283 Sensitive lineage4.9 None
ERR176651 HR-TB None
SRR3675318 Other lineage4.9 None
SRR3675387 Sensitive None
SRR3675527 RR-TB lineage4.9 None
SRR3675522 Other None
SRR3675537 Sensitive lineage4.9 None
SRR3675555 HR-TB None
SRR3675542 Other lineage4.9 None
SRR3675553 Sensitive lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
SRR3675547 Other lineage4.9 None
SRR3675548 Sensitive lineage4.9 None
SRR3675545 HR-TB None
ERR212125 HR-TB lineage4 None
SRR3675558 HR-TB None
SRR3675577 Sensitive lineage4.9 None
ERR3275196 Other lineage2.2.1 nl
ERR212138 HR-TB lineage4 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR4817692 HR-TB lineage4;lineage1.1.2 None
ERR4816466 HR-TB None
ERR4817998 Other lineage3 None
ERR2513121 Sensitive lineage3.1.3 None
ERR2446566 Other lineage4.1 None
ERR4818252 Other lineage4.1.1.2 None
ERR245675 Sensitive lineage1.1.2 None
ERR2509673 Other lineage2.2.1 None
ERR3275220 Other lineage3 nl
ERR2512770 Other lineage4.2.1 None
SRR5341323 Sensitive lineage4 None
ERR2514327 HR-TB lineage4.8 None
SRR5341437 Sensitive lineage4.9 None
SRR5341296 Sensitive lineage4.9 None
ERR2513283 Other lineage5.1.4 None
SRR5341396 Other lineage4 None
ERR2514552 Sensitive lineage3 None
SRR5341330 HR-TB None
ERR2446563 Other lineage2.2.1 nl
SRR5341345 Sensitive lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR5341456 Other None
SRR5535933 HR-TB None
ERR4821053 Other lineage3 None
SRR6045503 HR-TB None
ERR2693238 HR-TB lineage4.9 None
ERR2693239 HR-TB None
SRR6045706 Sensitive lineage4 None
ERR2660539 Other lineage4.9 None
ERR4821686 Sensitive lineage4.1.2.1 None
ERR2446144 Other lineage3 nl
ERR4821655 Sensitive lineage4 None
SRR6045892 Sensitive None
SRR6045795 HR-TB lineage2.2.1 None
SRR6044819 Sensitive lineage4.9 None
SRR6044835 Sensitive lineage4 None
SRR6045053 Other None
SRR6045952 HR-TB None
SRR6045217 Other lineage4 None
SRR6045371 Sensitive lineage4.2.1 None
SRR6046046 Other None
SRR6046245 Other lineage4.9 None
SRR6046259 Sensitive lineage4.9 None
SRR6325442 HR-TB None
SRR6046299 HR-TB None
ERR278594 HR-TB None
SRR6046382 HR-TB lineage2.2.1 None
SRR6325444 HR-TB None
ERR2517528 Other lineage3 nl
ERR4829530 Pre-XDR-TB lineage4.8 None
SRR6046514 HR-TB None
SRR6046492 Other None
SRR6046644 HR-TB None
SRR6325448 HR-TB None
SRR6046611 HR-TB lineage4.9 None
ERR323036 HR-TB None
SRR6325447 HR-TB None
SRR6046863 Sensitive lineage1.1.2 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR6397654 HR-TB lineage4.1.2.1 None
SRR6046802 Other lineage4 None
SRR6046878 HR-TB lineage4 None
SRR6046897 Sensitive lineage4 None
ERR3077978 Other lineage1.1 None
ERR4831638 Sensitive None
ERR4831739 MDR-TB lineage2.2.1 None
ERR5311090 HR-TB None
ERR323034 HR-TB lineage3.1 None
SRR6789624 MDR-TB lineage4.1 None
ERR294248 HR-TB None
ERR5311099 HR-TB None
ERR502943 HR-TB None
ERR323041 HR-TB None
ERR5311081 HR-TB None
SRR9970978 Sensitive lineage4.1.2 None
SRR9971114 Other lineage2.2.1 None
ERR323038 HR-TB None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR323045 HR-TB None
ERR323063 HR-TB None
ERR323107 Other lineage4 None
ERR323055 HR-TB None
ERR323054 HR-TB lineage3.1 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR1063858 HR-TB None
ERR323108 HR-TB lineage4 None
ERR11465232 Sensitive lineage4.1.2.1 None
ERR067699 HR-TB lineage4 None
ERR1063857 HR-TB None
ERR1063862 HR-TB None
DRR188519 Other lineage4.4.2 None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR1023525 HR-TB lineage4 None
ERR1034634 HR-TB None
ERR11465235 Sensitive lineage4.3.4.2.1 None
ERR1063839 HR-TB lineage2.2 None
ERR133825 Sensitive lineage4 None
ERR1063859 HR-TB None
ERR3283017 HR-TB None
ERR11465628 Sensitive lineage4.3.4.2.1 None
ERR3283010 Other La1 None
ERR3283021 HR-TB None
ERR3283014 HR-TB None
ERR3283028 Other None
ERR3283025 HR-TB None
ERR3283032 HR-TB None
ERR3283030 HR-TB lineage4.9 None
ERR3283031 HR-TB None
ERR3283048 HR-TB lineage4.9 None
ERR3283040 HR-TB None
ERR3283057 HR-TB lineage4 None
ERR3283047 HR-TB None
ERR3283055 HR-TB None
ERR3445501 HR-TB None
ERR4821179 Other lineage4.1.2.1 gb
ERR3445504 HR-TB None
ERR3468544 HR-TB None
ERR3445503 HR-TB None
ERR3445502 HR-TB lineage4 None
ERR349300 Sensitive lineage4.9 None
ERR349264 Sensitive lineage4 None
ERR349265 Sensitive lineage4 None
ERR349266 Sensitive lineage4.9 None
ERR349298 Sensitive lineage4 None
ERR349296 Sensitive lineage4 None
ERR349299 Sensitive lineage4 None
ERR363449 Sensitive lineage4 None
ERR349330 Sensitive lineage4 None
ERR363421 Sensitive lineage4 None
ERR363426 Sensitive lineage4 None
ERR363446 Sensitive lineage4 None
ERR363447 Sensitive lineage4 None
ERR363437 Sensitive lineage4 None
ERR363445 Sensitive lineage4 None
ERR363479 Sensitive lineage4 None
ERR363456 Sensitive lineage4 None
ERR363453 Sensitive lineage4 None
ERR363474 Sensitive lineage4 None
ERR363490 Sensitive lineage4 None
ERR363499 Sensitive lineage4 None
ERR363498 Sensitive lineage4 None
ERR363500 Sensitive lineage4 None
ERR363502 Sensitive lineage4 None
ERR363509 Sensitive lineage4 None
ERR363506 Sensitive lineage4 None
ERR369156 Sensitive lineage4.9 None
ERR369151 Sensitive lineage4.9 None
ERR369159 Sensitive lineage4 None
ERR369157 Sensitive lineage4.9 None
ERR369158 Sensitive lineage4 None
ERR3797016 HR-TB None
ERR369163 Sensitive lineage4 None
ERR373945 HR-TB lineage4 None
ERR373946 Sensitive lineage4 None
ERR373947 Sensitive lineage4 None
ERR369160 Sensitive lineage4.9 None
ERR369162 Sensitive lineage4 None
ERR3797065 MDR-TB lineage4 None
ERR3797015 HR-TB None
ERR3797019 Other La1.8.1 None
ERR3797023 HR-TB La1.8.1 None
ERR3797043 HR-TB None
ERR3797046 HR-TB None
ERR3797048 HR-TB None
ERR3797067 Other La1.8.1 None
ERR3797047 HR-TB lineage4 None
ERR3797063 HR-TB None
ERR3797080 HR-TB lineage4.9 None
ERR3797073 HR-TB La1.8.1 None
ERR3797064 Sensitive None
ERR3797079 Sensitive lineage4 None
ERR3797082 Other lineage4.9 None
ERR400336 Sensitive lineage4 None
ERR3797087 Sensitive lineage4 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR387051 HR-TB None
ERR400326 Sensitive lineage4 None
ERR3797081 Sensitive lineage4 None
ERR3797083 HR-TB None
ERR3797086 Other lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR400320 Sensitive lineage4 None
ERR400345 Other lineage4 None
ERR4188247 HR-TB None
ERR400538 RR-TB lineage5.1.2 None
ERR405209 Sensitive lineage4 None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR4178226 Sensitive lineage4 None
ERR4178309 Other lineage4.1.2.1 None
ERR4188350 HR-TB None
ERR473332 Other lineage4 None
ERR4769450 HR-TB None
ERR4769452 HR-TB None
ERR4769457 Other lineage4.9 None
ERR4769521 HR-TB None
ERR4769474 HR-TB lineage4 None
ERR4769497 HR-TB La1.2 None
ERR4798262 HR-TB La1 None
ERR4797350 Sensitive lineage4.9 None
ERR4796929 Sensitive lineage4 None
ERR4797313 HR-TB None
ERR4798431 HR-TB None
ERR4799025 Pre-XDR-TB None
ERR4810624 HR-TB lineage2.2 None
ERR4799513 HR-TB lineage2.2 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR5865388 MDR-TB lineage2.2.1 None
ERR4811031 Sensitive lineage4.5 None
ERR4811030 Sensitive None
ERR4812155 Sensitive None
ERR5917710 Other lineage4.1.2.1 None
ERR6358837 HR-TB None
ERR6866547 Sensitive lineage4 None
ERR6359066 HR-TB lineage4 None
ERR6865502 Sensitive lineage4 None
ERR6866410 Sensitive None
ERR6865513 Other lineage4.1.2.1 None
ERR702404 HR-TB None
ERR6866807 HR-TB lineage4 None
ERR752229 Other lineage4.5 None
ERR736817 HR-TB lineage4.3.4 None
ERR736839 Other None
ERR245758 Other lineage4.9.1 None
ERR736848 HR-TB None
ERR736875 HR-TB lineage4 None
ERR772255 MDR-TB lineage4.3.2 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
SRR21732954 Sensitive lineage4.9 None
ERR8976043 HR-TB None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR9896144 Other lineage3 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR9119669 HR-TB None
ERR9634265 Sensitive None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR9786986 HR-TB lineage4.1.2.1 None
SRR10809074 Sensitive lineage4 None
SRR10808399 Sensitive lineage4 None
SRR10808668 Sensitive lineage2.2.1 None
SRR10808805 Sensitive None
SRR1165306 Pre-XDR-TB lineage4.1.1.3 None
SRR1163221 HR-TB lineage4.1.2.1 None
SRR1140724 HR-TB lineage2.2.1 None
SRR1162740 Other lineage4.1.2.1 None
SRR1162864 HR-TB lineage4.1.2.1 None
SRR1165423 Other lineage4.1.2.1 None
SRR1165506 Other lineage4.1.2.1 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1166821 HR-TB lineage4.1.2.1 None
SRR1165584 Other lineage4.1.2.1 None
SRR1167055 Other lineage4.1.2.1 None
SRR1175500 MDR-TB lineage4 None
SRR1173767 HR-TB lineage4.4.1.1 None
SRR1175127 Sensitive lineage2.2.1.2 None
SRR1175496 HR-TB lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR1175508 Other lineage4.9 None
SRR1175507 MDR-TB lineage4 None
SRR13423649 Sensitive lineage2.2.1 None
SRR13837631 Sensitive lineage4.9 None
SRR13837519 Sensitive lineage4.9 None
SRR13861397 HR-TB lineage4.9 None
SRR13861153 Other lineage4.9 None
SRR13861564 Sensitive lineage4.9 None
SRR13861415 Other lineage4.9 None
SRR13861434 RR-TB lineage4.9 None
SRR13861528 HR-TB lineage4.9 None
SRR13861553 Sensitive lineage4.9 None
SRR14782405 HR-TB None
SRR13861671 Sensitive lineage4.9 None
SRR13861573 Other lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
SRR16156804 RR-TB lineage4.9 None
SRR14801749 Sensitive None
SRR1510066 Other lineage1.2.1.2.1 None
SRR1640750 HR-TB None
SRR19295647 Sensitive lineage4.9 None
SRR18910194 HR-TB lineage2.2 None
SRR20969542 Other lineage4.4.2 None
SRR2010299 Pre-XDR-TB lineage2.2.1 None
SRR20969708 HR-TB lineage2.2 None
SRR20969731 Other lineage2.2.1 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR20970016 Other lineage2.2 None
SRR21677886 Sensitive lineage4.9 None