Rv3596c - c.1497C>G
Drug resistance types
69 Sensitive
32 RR-TB
64 HR-TB
104 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
120 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 157 |
| M.canetti;lineage2.1;lineage4.9 | 24 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage4 | 5 |
| La1.7;lineage3.1;lineage4 | 1 |
| La1.8.1 | 3 |
| lineage3 | 5 |
| La3;M.canetti;lineage4.8;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 6 |
| La1;lineage4.9 | 3 |
| lineage4.1.2.1 | 19 |
| La3;M.canetti;lineage2.1;lineage4.9 | 12 |
| lineage2.2 | 4 |
| La1.7;lineage4.9 | 6 |
| M.canetti;lineage2.1;lineage4.1.2.1 | 1 |
| lineage4.4.1.1 | 2 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage4.3.4.1 | 1 |
| lineage2.2.1 | 14 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| La1;lineage4.1.2 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4.1;lineage4.9 | 2 |
| lineage1.2.1.2.1 | 1 |
| La3;lineage4.9 | 10 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | 1 |
| lineage1.1 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| 3 | |
| lineage1.1.2 | 2 |
| lineage4.1.1.3 | 5 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage2.2.1.2 | 1 |
| lineage4.3.4 | 1 |
| M.canetti;lineage2.1;lineage4 | 1 |
| La2;lineage2.2 | 1 |
| lineage2.2.2 | 1 |
| La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.9 | 2 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 4 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.2 | 1 |
| La2;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 6 |
| lineage4.4.2 | 2 |
| lineage4.3.4.2.1 | 4 |
| lineage1;lineage4.9 | 2 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.5 | 2 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 2 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | 2 |
| lineage4.9;lineage7 | 4 |
| lineage4.8 | 3 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage2.1;lineage4.3.2 | 1 |
| M.canetti;lineage2.1 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | 1 |
| lineage5.1.2 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage4.3.3 | 2 |
| lineage3;lineage4.9 | 1 |
| La1.7.1 | 2 |
| lineage5.1.4 | 1 |
| lineage1.1.3.1 | 1 |
| La3;M.canetti;lineage4.9 | 2 |
| La1.2.BCG | 2 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage2.2.1;lineage4 | 1 |
| La3;M.canetti;lineage2.1;lineage3.1 | 1 |
| lineage4.9.1 | 1 |
| M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | 1 |
| lineage4.2.1 | 1 |
| La3;lineage4.3.4 | 1 |
| M.canetti;lineage4.3.1;lineage4.9 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage1.1.1;lineage4 | 1 |
| La3;M.canetti;lineage3.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| M.canetti;lineage2.1;lineage3 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| La3;lineage4 | 1 |
| lineage3.1.2.1;lineage4 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage1.1.2;lineage4 | 1 |
| lineage4.1.1.2 | 1 |
| lineage3.1.3 | 1 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| lineage1.2.1.1 | 1 |
| La1;lineage2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 393 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045347 | Other | lineage4.9 | None | ERR176658 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR6865502 | Sensitive | lineage4 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR3797019 | Other | La1.8.1 | None | ERR2517528 | RR-TB | lineage3 | nl | ERR038268 | MDR-TB | La3;M.canetti;lineage4.8;lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | SRR3675582 | Other | lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR5311096 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | ERR1873393 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR5917710 | RR-TB | lineage4.1.2.1 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR323036 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR1023295 | MDR-TB | M.canetti;lineage2.1;lineage4.1.2.1 | None | SRR6045706 | Other | lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR323107 | HR-TB | lineage4.9 | None | ERR126600 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR3797081 | Sensitive | lineage4.9 | None | SRR12708384 | Sensitive | lineage4.9 | None | SRR10808399 | Sensitive | lineage4.9 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | SRR1173767 | MDR-TB | lineage4.4.1.1 | None | ERR363490 | Other | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | SRR3675450 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | ERR369156 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR5311102 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | ERR9786711 | Other | lineage4.6.2.2 | None | ERR4798431 | Other | lineage4.1;lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | SRR21732954 | Sensitive | lineage4.9 | None | ERR4188350 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR1510066 | RR-TB | lineage1.2.1.2.1 | None | ERR126608 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR363500 | Other | lineage4.9 | None | SRR3675515 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR3675320 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | None | ERR323033 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR3077978 | RR-TB | lineage1.1 | None | ERR3275196 | RR-TB | lineage2.2.1 | nl | ERR473314 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR13861528 | HR-TB | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR971389 | Other | lineage4.9 | None | ERR181824 | MDR-TB | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | SRR18289200 | Other | lineage4.9 | None | SRR1640750 | RR-TB | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR3797029 | Other | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR1035239 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR363449 | Other | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR1165306 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR3797087 | Sensitive | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR3675555 | MDR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | SRR3675507 | RR-TB | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR6046514 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR2693239 | RR-TB | M.canetti;lineage2.1;lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR363499 | Other | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | ERR2693252 | HR-TB | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR5311081 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR18910194 | HR-TB | lineage2.2.2 | None | ERR3797065 | RR-TB | lineage4.9 | None | ERR124652 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR5535933 | Other | lineage4.9 | None | ERR124651 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | ERR4821053 | RR-TB | lineage3 | None | ERR5311100 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311101 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR124642 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR6866410 | HR-TB | lineage4.9 | None | ERR5311098 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR1163221 | MDR-TB | lineage4.1.2.1 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR3275220 | Other | lineage3 | nl | ERR363506 | Sensitive | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | SRR3675487 | MDR-TB | M.canetti;lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR6325448 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR3675545 | RR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR6046644 | MDR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR1873396 | Pre-XDR-TB | M.canetti;lineage2.2 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR3675506 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR323060 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR3797023 | MDR-TB | La1.8.1 | None | SRR3675495 | RR-TB | lineage2.1;lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | SRR20969542 | Other | lineage4.4.2 | None | ERR323064 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR161033 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | SRR3675486 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR926160 | Other | lineage4.9 | None | ERR4811031 | Other | lineage4.5 | None | ERR3283032 | Other | lineage4.9 | None | ERR4811030 | Other | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR3675477 | Sensitive | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | SRR6046382 | RR-TB | lineage2.2.1 | None | ERR4816551 | MDR-TB | lineage4.1.1.3 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR5311082 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | ERR349264 | Other | lineage4.9 | None | SRR3675280 | RR-TB | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR6325442 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | ERR2446566 | Other | lineage4.9 | None | ERR363498 | Other | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR6358837 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR6045948 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3468544 | RR-TB | lineage2.1;lineage4.9 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | ERR3801503 | Other | lineage4.6.2.2 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR3283014 | Other | La3;lineage4.9 | None | SRR10809074 | HR-TB | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | SRR3675518 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR4814396 | Sensitive | lineage4.1.1.3 | None | ERR3283042 | HR-TB | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR19295647 | HR-TB | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR323055 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR1162864 | MDR-TB | lineage4.1.2.1 | None | ERR772255 | MDR-TB | lineage2.1;lineage4.3.2 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | ERR323041 | MDR-TB | M.canetti;lineage2.1 | None | SRR1165423 | RR-TB | lineage4.1.2.1 | None | ERR3283017 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | None | ERR400538 | RR-TB | lineage5.1.2 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR2509673 | Other | lineage2.2.1 | None | SRR3675508 | MDR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR12708419 | Other | lineage4.3.3 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | ERR5311090 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR7240492 | MDR-TB | La1.7.1 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | SRR5341456 | Other | lineage4.9 | None | SRR1165584 | Other | lineage4.1.2.1 | None | ERR323038 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR3675554 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR363446 | Other | lineage4.9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | SRR8692887 | Other | None | SRR28351339 | MDR-TB | lineage4 | None | ERR323040 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR6045795 | Other | lineage2.2.1 | None | ERR349300 | Other | lineage4.9 | None | ERR6866807 | RR-TB | lineage4.9 | None | ERR4188342 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR2693229 | RR-TB | La3;M.canetti;lineage4.9 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR176766 | MDR-TB | lineage2.1;lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR779852 | HR-TB | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR5341330 | Other | lineage4.9 | None | SRR1165506 | Other | lineage4.1.2.1 | None | ERR2693242 | RR-TB | lineage2.1;lineage4.9 | None | ERR4821179 | Other | lineage4.1.2.1 | gb | SRR1175496 | Sensitive | lineage4.9 | None | SRR13423649 | Other | lineage2.2.1 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | SRR6046046 | Other | lineage4.9 | None | SRR1167055 | Other | lineage4.1.2.1 | None | ERR294248 | MDR-TB | lineage2.1;lineage4.9 | None | SRR3675322 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR323034 | MDR-TB | La3;M.canetti;lineage2.1;lineage3.1 | None | SRR6046878 | Other | lineage4.9 | None | ERR245758 | Other | lineage4.9.1 | None | ERR5162090 | RR-TB | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR3675558 | MDR-TB | M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | None | ERR926165 | Other | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR9896144 | Other | lineage3 | None | ERR926156 | Other | lineage4.9 | None | ERR323063 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR2693228 | RR-TB | lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR387051 | RR-TB | lineage4.9 | None | ERR11465628 | Sensitive | lineage4.3.4.2.1 | None | SRR3675269 | RR-TB | lineage4.9 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | ERR369163 | Other | lineage4.9 | None | SRR6045548 | Other | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | SRR3675444 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR9119669 | MDR-TB | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR3797016 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR323047 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | ERR373946 | Other | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR386953 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311078 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR3797063 | Other | La3;lineage4.9 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR9119138 | RR-TB | M.canetti;lineage4.3.1;lineage4.9 | None | SRR3675580 | Sensitive | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR323058 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR3675481 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR2229143 | RR-TB | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR6045290 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR126618 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR2446144 | Other | lineage3 | nl | SRR3675541 | Sensitive | lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | SRR3675387 | Other | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR5311099 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | SRR12708372 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR363453 | Other | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR3675494 | RR-TB | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | SAMN02414850 | Other | lineage4.1.2.1 | None | ERR3468607 | RR-TB | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR3675243 | MDR-TB | lineage4.9 | None | SRR6045952 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR5311083 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | ERR926155 | Other | lineage4.9 | None | ERR3283021 | MDR-TB | lineage4.9 | None | ERR363479 | Other | lineage4.9 | None | ERR323054 | MDR-TB | La3;M.canetti;lineage3.1 | None | SRR1915487 | Other | La1.2.BCG | None | SRR3675464 | MDR-TB | lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR4814536 | MDR-TB | M.canetti;lineage2.1;lineage3 | None | ERR349266 | Other | lineage4.9 | None | ERR369159 | Other | lineage4.9 | None | SRR3675568 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR3283028 | Other | La3;lineage4 | None | DRR188519 | Other | lineage4.4.2 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR28351455 | Other | lineage3.1.2.1;lineage4 | None | SRR12708416 | Sensitive | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR752229 | Other | lineage4.5 | None | ERR369162 | Other | lineage4.9 | None | ERR278594 | MDR-TB | lineage2.1;lineage4.9 | None | SRR6325445 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR4817692 | MDR-TB | lineage1.1.2;lineage4 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR373945 | Other | lineage4.9 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR4818252 | HR-TB | lineage4.1.1.2 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR8976043 | MDR-TB | lineage2.1;lineage2.2;lineage6.3 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | SRR10808668 | Other | lineage2.2.1 | None | ERR363421 | Other | lineage4.9 | None | ERR11465235 | Sensitive | lineage4.3.4.2.1 | None | ERR3797067 | Other | La1.8.1 | None | ERR400320 | Sensitive | lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR3675561 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR3283031 | Other | La3;lineage4.9 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR736848 | Other | lineage4.9 | None | ERR926157 | Other | lineage4.9 | None | ERR5311089 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR067699 | HR-TB | La1;lineage2;lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR3283016 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None |
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