Rv1484 - c.555T>C


Drug resistance types
14 Sensitive 3 RR-TB 165 HR-TB 16 MDR-TB 7 Pre-XDR-TB 0 XDR-TB 115 Other
lineage Counts
lineage Count
lineage4.9 22
183
lineage4 23
lineage2.2.1 9
lineage2.2.1.1 3
lineage4.2.2.2 1
lineage1.1 1
lineage4.1.2.1 12
lineage4.2.1.1 1
lineage2.2.1.2 1
lineage2.2 5
lineage4.1 2
lineage4.3.4.1 2
La2 1
lineage4.1.2.1;lineage2.2.1 1
La1 2
La1.8.1 2
lineage6.1.1 2
lineage4.1.3 2
lineage4;lineage3.1 1
lineage1.2.2.2 1
lineage2 3
lineage3 3
lineage4.8 3
lineage3.1.2 1
lineage4.6.1.1 1
lineage4.3.2 1
lineage1.1.3.1 1
lineage1.1.2 1
lineage4.1.1 3
lineage4.6.2.2 1
lineage6.3.1 1
lineage3.1.2.2;lineage3.1.2.1 1
La3 1
lineage4.4.1.1 2
lineage3.1 1
lineage1.2.1.2 1
lineage4.5 2
lineage4.2.1 1
lineage1.1.1 1
lineage9;lineage3.1 1
lineage4.9;La1 1
lineage6.3;lineage4.9;lineage2.1 1
lineage4.2;La1.7 1
La1.2 1
lineage4.9;lineage4.6.3 1
lineage6.3;lineage2.2.1 1
lineage4.3.4.2.1 1
lineage4.3 1
lineage4.1.2 2
lineage4.1.1.3 1
lineage4.8;La3 1
lineage4;lineage1.1 1
spoligotype Counts
spoligotype Count
None 320
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6046152 Other lineage4.9 None
SRR6046133 HR-TB None
SRR6044790 HR-TB None
SRR6045892 Sensitive None
SRR6044838 Other lineage4.9 None
SRR6044876 Sensitive lineage4 None
SRR6044835 Sensitive lineage4 None
SRR6044855 Other lineage4.9 None
SRR6044890 Other lineage4.9 None
SRR6045952 HR-TB None
SRR6046066 HR-TB None
SRR6046210 Other lineage4 None
SRR6045233 HR-TB None
SRR6045327 HR-TB None
SRR6046460 HR-TB None
SRR6045399 Other None
SRR6046225 HR-TB None
SRR6325442 HR-TB None
SRR6046362 HR-TB None
SRR6046397 Other None
SRR6325444 HR-TB None
ERR4830353 Other None
SRR6046482 HR-TB None
SRR6046540 HR-TB None
SRR6046514 HR-TB None
SRR6046644 HR-TB None
SRR6325448 HR-TB None
SRR6046594 HR-TB lineage4 None
SRR6046824 HR-TB None
SRR6325447 HR-TB None
SRR6046897 Sensitive lineage4 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6079962 HR-TB lineage2.2.1.1 None
ERR4797207 Sensitive lineage4.2.2.2 in
ERR3077978 Other lineage1.1 None
SRR6397654 HR-TB lineage4.1.2.1 None
SRR6832787 RR-TB lineage2.2.1 None
SRR6832178 HR-TB lineage4.2.1.1 None
SRR6789626 Other None
ERR294248 HR-TB None
SRR6797438 Other lineage2.2.1.2 None
ERR4831545 Pre-XDR-TB lineage2.2 None
ERR4831546 HR-TB lineage2.2 None
SRR6789624 MDR-TB lineage4.1 None
ERR323036 HR-TB None
ERR11465353 Sensitive lineage4.3.4.1 None
ERR294266 HR-TB None
ERR502524 HR-TB La2 None
ERR11488822 Pre-XDR-TB lineage4.1.2.1;lineage2.2.1 None
ERR502532 HR-TB None
ERR502889 Other None
ERR5311081 HR-TB None
SRR8217918 HR-TB None
SRR7496517 Other None
SRR7535086 Other None
ERR323041 HR-TB None
ERR323053 HR-TB None
ERR323063 HR-TB None
ERR5311099 HR-TB None
ERR5311090 HR-TB None
ERR323038 HR-TB None
SRR7585435 Other lineage4.9 None
ERR323039 HR-TB None
ERR323043 HR-TB None
ERR323055 HR-TB None
ERR1034652 Other None
ERR067681 HR-TB None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR1023525 HR-TB lineage4 None
ERR1063862 HR-TB None
ERR1035157 Other lineage4.9 None
ERR1063859 HR-TB None
ERR1063858 HR-TB None
ERR133986 HR-TB None
ERR3283017 HR-TB None
ERR3283010 Other La1 None
ERR3283013 MDR-TB lineage4 None
ERR3283025 HR-TB None
ERR3283014 HR-TB None
ERR3283021 HR-TB None
ERR3283028 Other None
ERR3283024 Other None
ERR3283027 HR-TB None
ERR3283057 HR-TB lineage4 None
ERR3283032 HR-TB None
ERR3283031 HR-TB None
ERR3283036 HR-TB None
ERR3283047 HR-TB None
ERR3283058 Other lineage4.9 None
ERR3797048 HR-TB None
ERR3439432 Other None
ERR3445502 HR-TB lineage4 None
ERR3445503 HR-TB None
ERR3797024 Other lineage4.9 None
ERR3797043 HR-TB None
ERR3797036 HR-TB None
ERR3797044 Other None
ERR3445501 HR-TB None
ERR3468544 HR-TB None
ERR3797016 HR-TB None
ERR3797014 Other None
ERR3797017 Other None
ERR3797047 HR-TB lineage4 None
ERR3797065 MDR-TB lineage4 None
ERR3797058 Other lineage4.9 None
ERR3797061 Other None
ERR3797069 Other None
ERR3797063 HR-TB None
ERR3797064 Sensitive None
ERR3797073 HR-TB La1.8.1 None
ERR3797079 Sensitive lineage4 None
ERR3799304 Other lineage6.1.1 None
ERR3797083 HR-TB None
ERR3797086 Other lineage4.9 None
ERR3797087 Sensitive lineage4 None
ERR4798262 HR-TB La1 None
ERR3804155 Other lineage4.1.2.1 None
ERR3804169 HR-TB lineage4.1.3 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR403298 HR-TB lineage4 None
ERR405209 Sensitive lineage4 None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR4188350 HR-TB None
ERR4769474 HR-TB lineage4 None
ERR4797201 Other lineage1.2.2.2 None
ERR4188247 HR-TB None
ERR4407463 HR-TB None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4798406 HR-TB None
ERR4798504 Other lineage3 None
ERR4799171 Pre-XDR-TB lineage4.8 None
ERR4798648 HR-TB lineage3.1.2 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4811105 HR-TB None
ERR4800341 Other lineage3 None
ERR4810741 HR-TB None
ERR4811022 HR-TB None
ERR4811142 MDR-TB None
ERR6358755 Other lineage4.6.1.1 None
ERR5336148 Other None
ERR6358837 HR-TB None
ERR702404 HR-TB None
ERR9117709 HR-TB None
ERR736848 HR-TB None
ERR736865 HR-TB None
ERR736875 HR-TB lineage4 None
ERR772255 MDR-TB lineage4.3.2 None
ERR702406 HR-TB None
ERR736835 HR-TB None
ERR736839 Other None
ERR736867 HR-TB None
ERR736874 HR-TB None
ERR7911670 Pre-XDR-TB lineage2.2 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR8976043 HR-TB None
SRR1169194 Other None
ERR9117721 HR-TB lineage1.1.2 None
ERR9786421 Other lineage4.1.2.1 None
ERR9786617 Other lineage4.1.1 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786671 Other None
ERR9786682 Other lineage4.1.2.1 None
ERR9787139 Other lineage6.3.1 None
SRR1167384 Other lineage4 None
ERR9786569 Other lineage4.8 None
ERR9786604 Other None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786642 Other lineage4.1.2.1 None
ERR9786694 Other lineage4.1.2.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR9787014 Other lineage6.1.1 None
ERR9787197 Other None
ERR987722 HR-TB None
ERR987729 HR-TB lineage3.1.2.2;lineage3.1.2.1 None
SRR1172234 Other None
SRR1169249 Other La3 None
SRR1169306 Other None
SRR1172310 HR-TB None
SRR1172728 MDR-TB None
SRR1173118 Other None
SRR1172817 HR-TB None
SRR1172844 MDR-TB lineage4.4.1.1 None
SRR1172951 Other None
SRR1173153 HR-TB None
SRR1173363 HR-TB None
SRR1173562 HR-TB lineage4 None
SRR1173384 Other lineage4 None
SRR1173400 Other None
SRR1173633 HR-TB lineage4.9 None
SRR1174897 HR-TB None
SRR1173629 Other None
SRR1173706 Other lineage4.9 None
SRR1173778 Other None
SRR1173788 Other None
SRR1175049 RR-TB None
SRR1175074 MDR-TB None
SRR1180270 Other lineage2.2.1 None
SRR1180147 Other lineage2.2.1.1 None
SRR1183106 Other lineage2.2.1.1 None
SRR1183144 Other lineage2.2.1 None
SRR1184294 HR-TB None
SRR1184346 HR-TB lineage3.1 None
SRR1184372 MDR-TB None
SRR1184381 MDR-TB None
SRR1184380 HR-TB None
SRR1184388 Other None
SRR1196494 MDR-TB None
SRR1196546 HR-TB None
SRR1196566 HR-TB None
SRR1196677 HR-TB lineage2 None
SRR1196768 MDR-TB None
SRR12006550 Other lineage1.2.1.2 None
SRR13861397 HR-TB lineage4.9 None
SRR12142341 HR-TB None
SRR12416840 MDR-TB lineage4.9 None
SRR12416824 HR-TB None
SRR13423544 Other lineage4.5 None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR13861400 Other lineage4.9 None
SRR13861500 RR-TB lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR13861646 Other lineage4.9 None
SRR13861660 Sensitive lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
SRR13861534 Other lineage4.9 None
SRR1640750 HR-TB None
SRR15368973 Other None
SRR19303884 HR-TB None
SRR18213713 HR-TB lineage4.5 None
SRR17832802 HR-TB lineage3 None
SRR18910194 HR-TB lineage2.2 None
SRR19295647 Sensitive lineage4.9 None
SRR20969677 HR-TB lineage2 None
SRR19304036 HR-TB None
SRR9588018 MDR-TB lineage4.4.1.1 None
SRR25827418 Pre-XDR-TB lineage9;lineage3.1 None
SRR8692899 Other lineage4.9 None
ERR176778 HR-TB None
ERR4815604 HR-TB None
SRR23961542 Other lineage4.9;La1 None
SRR23961558 Other lineage6.3;lineage4.9;lineage2.1 None
SRR23961559 Other lineage4.2;La1.7 None
SRR23961549 Other La1.2 None
SRR26159047 Other lineage4.9;lineage4.6.3 None
SRR28119811 Other lineage6.3;lineage2.2.1 None
SRR3675464 HR-TB lineage4.1 None
ERR176779 HR-TB None
SRR6325445 HR-TB None
ERR176793 Other lineage4.1.1 None
ERR158583 HR-TB None
ERR1035239 HR-TB None
SRR3675465 HR-TB None
SRR3675501 HR-TB None
SRR3675482 HR-TB None
ERR4814352 HR-TB lineage2.2.1 None
ERR161034 Other lineage4.3.4.2.1 None
SRR3675488 HR-TB None
SRR3675486 HR-TB None
SRR3675222 Other None
SRR3675236 HR-TB None
SRR3675221 HR-TB None
SRR3675234 Other None
ERR181824 HR-TB lineage4 None
SRR3675510 Other None
ERR176643 HR-TB None
SRR3675312 HR-TB lineage4 None
ERR176740 HR-TB None
SRR3675502 Other None
ERR176568 Other lineage4.3 None
SRR3675311 Other None
ERR181887 HR-TB None
SRR3675383 HR-TB None
ERR4816999 Other None
ERR2027263 Other lineage4 None
ERR4816151 Other lineage4.8 None
SRR3675550 Other None
ERR212001 HR-TB None
ERR212033 HR-TB None
ERR212034 HR-TB None
SRR3675558 HR-TB None
SRR3675572 Other None
SRR3675574 HR-TB None
ERR4816466 HR-TB None
SRR3675571 HR-TB None
ERR4818021 Other La1.8.1 None
SRR3742665 HR-TB None
ERR4816585 Other lineage2.2 None
ERR4816656 HR-TB None
SRR4035722 Other lineage4.1.2 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR4817893 Other lineage4.8;La3 None
ERR2229143 Other lineage4.1.1 None
ERR1035162 Other None
ERR234659 HR-TB None
SRR4035834 Other lineage4.1.2 None
ERR2514692 Other None
ERR4820854 Other lineage4.1.2.1 None
ERR4819322 Other lineage4;lineage1.1 None
SRR5341418 Other None
ERR4819781 Other lineage2.2.1 None
ERR4818929 HR-TB None
ERR4818615 Other None
SRR5341470 HR-TB None
SRR5341302 HR-TB None
ERR2514821 Other lineage2.2.1 None
SRR5341333 HR-TB None
SRR5341330 HR-TB None
ERR2693231 Other None
SRR6045503 HR-TB None
SRR6045450 Other lineage4.9 None
ERR2693230 Other None
ERR2693254 Other None
ERR278594 HR-TB None
ERR2693257 Other None
SRR6045526 HR-TB None
ERR4821578 Other lineage4.1.2.1 None
SRR6045519 HR-TB None
SRR6045555 HR-TB None