Rv0006 - c.-368A>G
Drug resistance types
48 Sensitive
2 RR-TB
128 HR-TB
11 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
71 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 26 |
| lineage2.2.1 | 9 |
| La3 | 1 |
| 131 | |
| lineage2.2.1.1 | 2 |
| lineage4.9 | 24 |
| lineage4.3.4.1 | 1 |
| La1.8.1 | 3 |
| lineage1.1.1 | 1 |
| lineage2.2 | 7 |
| lineage4.9;lineage4.6.3 | 1 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage4.1 | 1 |
| lineage6 | 22 |
| lineage4.3.4 | 1 |
| lineage2.1 | 2 |
| lineage4.3 | 1 |
| lineage3 | 2 |
| lineage4.1.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.1.2.1 | 2 |
| lineage1.1 | 1 |
| lineage3.1 | 2 |
| lineage6.1.2 | 7 |
| lineage5.2 | 2 |
| lineage4.6.2.2 | 4 |
| La2 | 1 |
| lineage4.1.2 | 1 |
| lineage4.4.1.2 | 1 |
| lineage1.2.2.2 | 1 |
| La1 | 1 |
| lineage3.1.2 | 1 |
| lineage4.3.3 | 2 |
| lineage4.8;lineage4.1 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 266 |
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1167384 | Other | lineage4 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1169249 | Other | La3 | None | SRR1169306 | Other | None | SRR1173788 | Other | None | SRR1174897 | HR-TB | None | SRR1172310 | HR-TB | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR13861381 | MDR-TB | lineage4.9 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR13861500 | RR-TB | lineage4.9 | None | SRR13861571 | RR-TB | lineage4.9 | None | SRR1791696 | Other | La1.8.1 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR14782405 | HR-TB | None | SRR1640750 | HR-TB | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR4815138 | Sensitive | lineage6 | None | SRR3675502 | Other | None | SRR6325445 | HR-TB | None | ERR1035239 | HR-TB | None | SRR3675270 | HR-TB | None | ERR161033 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR181744 | HR-TB | None | SRR3675234 | Other | None | SRR3675482 | HR-TB | None | ERR4814359 | Sensitive | lineage6 | None | SRR3675486 | HR-TB | None | ERR4815471 | Other | lineage4.9 | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675246 | Sensitive | lineage4 | None | ERR176643 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | ERR176651 | HR-TB | None | ERR212001 | HR-TB | None | ERR176740 | HR-TB | None | SRR3675545 | HR-TB | None | SRR3675383 | HR-TB | None | ERR4815035 | HR-TB | lineage6 | None | ERR4815830 | Sensitive | lineage6 | None | SRR3675510 | Other | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR212033 | HR-TB | None | SRR3675558 | HR-TB | None | ERR212034 | HR-TB | None | ERR4816656 | HR-TB | None | ERR4816470 | Other | lineage3 | None | SRR3675571 | HR-TB | None | ERR212123 | Other | None | SRR3675574 | HR-TB | None | ERR4816466 | HR-TB | None | ERR4817835 | Sensitive | lineage6 | None | ERR4816685 | Sensitive | lineage6 | None | ERR4816877 | Sensitive | lineage4.9 | None | ERR4817905 | Sensitive | lineage6 | None | ERR4818787 | MDR-TB | lineage6 | None | ERR4818479 | Sensitive | lineage6 | None | ERR234659 | HR-TB | None | ERR2229143 | Other | lineage4.1.1 | None | ERR4819044 | Sensitive | lineage6 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR4818929 | HR-TB | None | ERR1035138 | MDR-TB | None | ERR4818574 | Other | lineage6 | None | ERR4818607 | Sensitive | lineage4.9 | None | ERR4818968 | Sensitive | lineage6 | None | SRR5341418 | Other | None | SRR5341300 | Other | lineage4 | None | ERR4819688 | Sensitive | lineage6 | None | ERR4820866 | Sensitive | lineage6 | None | ERR2514821 | Other | lineage2.2.1 | None | ERR4819933 | Other | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341313 | HR-TB | None | ERR2693239 | HR-TB | None | SRR6045450 | Other | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR2693231 | Other | None | SRR5341470 | HR-TB | None | ERR4821011 | Other | lineage6 | None | ERR4821837 | Sensitive | lineage6 | None | ERR2693230 | Other | None | ERR4821841 | Sensitive | lineage6 | None | SRR6045503 | HR-TB | None | ERR2693254 | Other | None | ERR2693257 | Other | None | SRR6045526 | HR-TB | None | SRR6045519 | HR-TB | None | ERR4821451 | Other | lineage6 | None | ERR2693227 | Other | lineage4.9 | None | ERR278594 | HR-TB | None | ERR4821460 | Sensitive | lineage6 | None | ERR4821738 | Sensitive | lineage6 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045555 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6044890 | Other | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6045399 | Other | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6325444 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046385 | Other | lineage4.9 | None | SRR6046397 | Other | None | SRR6045892 | Sensitive | None | SRR6044838 | Other | lineage4.9 | None | SRR6045053 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6046046 | Other | None | SRR6045233 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | SRR6325448 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046644 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6325442 | HR-TB | None | SRR6511621 | HR-TB | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR4814941 | Sensitive | lineage6.1.2 | gb | ERR4831117 | HR-TB | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4815111 | Sensitive | lineage6.1.2 | gb | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR502524 | HR-TB | La2 | None | ERR323036 | HR-TB | None | ERR294248 | HR-TB | None | ERR502510 | Sensitive | lineage4 | None | ERR502889 | Other | None | ERR323038 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311090 | HR-TB | None | ERR5311081 | HR-TB | None | SRR8217918 | HR-TB | None | SRR7496471 | Sensitive | None | ERR323039 | HR-TB | None | SRR9970980 | Other | lineage4.1.2 | None | ERR323053 | HR-TB | None | ERR323045 | HR-TB | None | ERR323041 | HR-TB | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1034634 | HR-TB | None | ERR1063855 | Other | lineage4 | None | ERR4818775 | Sensitive | lineage6.1.2 | gb | ERR1034652 | Other | None | ERR1063859 | HR-TB | None | ERR1063896 | Sensitive | None | ERR3273109 | MDR-TB | lineage4 | None | ERR4822180 | Sensitive | lineage6.1.2 | gb | ERR4820566 | Sensitive | lineage6.1.2 | gb | ERR4822226 | Sensitive | lineage6.1.2 | gb | ERR4821774 | Sensitive | lineage6.1.2 | gb | ERR133986 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283024 | Other | None | ERR3283032 | HR-TB | None | ERR363456 | Sensitive | lineage4 | None | ERR3445503 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3283055 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797016 | HR-TB | None | ERR363509 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR3797015 | HR-TB | None | ERR3797017 | Other | None | ERR3797014 | Other | None | ERR3797046 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797043 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797044 | Other | None | ERR403298 | HR-TB | lineage4 | None | ERR3797061 | Other | None | ERR3797082 | Other | lineage4.9 | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797083 | HR-TB | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR3806839 | Sensitive | lineage6 | None | ERR4024991 | Other | None | ERR3797060 | Other | La1.8.1 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4188247 | HR-TB | None | ERR4188350 | HR-TB | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473332 | Other | lineage4 | None | ERR4798406 | HR-TB | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4797264 | Sensitive | None | ERR4797474 | Other | None | ERR4798262 | HR-TB | La1 | None | ERR4769452 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4796577 | MDR-TB | None | ERR4798099 | Other | None | ERR6358951 | HR-TB | lineage4 | None | ERR4798504 | Other | lineage3 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6358837 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811493 | HR-TB | None | ERR5908228 | Other | lineage4.3.3 | None | ERR6866639 | Other | None | ERR6359045 | HR-TB | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6358991 | HR-TB | None | ERR6359066 | HR-TB | lineage4 | None | ERR6866022 | Other | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR702404 | HR-TB | None | ERR736848 | HR-TB | None | ERR736865 | HR-TB | None | ERR751326 | Sensitive | lineage4 | None | ERR736837 | Other | lineage4.9 | None | ERR736835 | HR-TB | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9119096 | Other | lineage4.3.3 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR8976043 | HR-TB | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9786843 | Other | None | ERR9787357 | Sensitive | lineage6 | None | ERR987722 | HR-TB | None |
|---|
