Rv3457c - c.252G>C


Drug resistance types
26 Sensitive 17 RR-TB 99 HR-TB 47 MDR-TB 4 Pre-XDR-TB 1 XDR-TB 70 Other
lineage Counts
lineage Count
lineage4.9 107
lineage4.2;lineage4.9 2
La3;lineage4 1
La1.7;lineage4.9 3
lineage3.1;lineage9 1
La1;lineage4.9 2
lineage2.2.1 17
lineage4.8 4
lineage4.3.4 1
lineage4.8;lineage4.9 2
M.canetti;lineage4.6.4;lineage4.9 2
lineage4.1.2.1 2
La2;lineage2.2 1
lineage2.2.1.1 3
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage3 2
La3;lineage4.9 8
lineage1.2.1.1 1
lineage4.6.3;lineage4.9 1
lineage4.3.4.2.1 2
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.9 3
La1.2;La1.8.1 1
La1.7.1;La1.7.X-unk4 1
lineage4.9;lineage9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.1.1.3 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.9;lineage7 1
La2;lineage4.9;lineage9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage4.6.4;lineage4.9 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage4.2;lineage4.6.3;lineage4.9 1
lineage4.6.2.2 5
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.2;lineage4.8.1;lineage4.9 2
lineage4.4.1.2 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage1.1.3.1 1
2
La1.6;lineage4 1
lineage2.2 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
lineage6.1.1 2
La1.6;La3;M.canetti;lineage4.2.2 1
La1.7.X-unk4;lineage4.9 1
lineage2.2.2 1
lineage4.1.2 1
lineage4.3.3 2
M.canetti;lineage4.2;lineage4.9 1
La1.6;La3;lineage4.9 2
La1.6;La3;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La2;lineage4.9 2
lineage6.1.3 2
lineage4 2
lineage1.1.2 1
lineage4.6.1.2 1
lineage1;lineage4.9 1
lineage3.1.2.2 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage1.2.2.2 2
lineage4.9;lineage6.3 1
La1.7.1;lineage4.9 1
lineage4.3.4.1 2
La1.7.1;La1.7.X-unk4;lineage7 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La1.7;lineage4.9;lineage6 1
La1.2.BCG 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La1.8.1 3
La1.7.1 1
lineage1.1.1 2
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
lineage3.1.2.1;lineage3.1.2.2 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9;lineage6.3 1
lineage4.3.2.1 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La1;lineage4.1.2 1
lineage4.3.4.2 1
lineage6.1.2 1
M.canetti;lineage4.2 1
spoligotype Counts
spoligotype Count
None 264
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR5341469 HR-TB lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR3283028 Other La3;lineage4 None
ERR4769442 Sensitive lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR6045359 HR-TB lineage4.9 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR6866807 RR-TB lineage4.9 None
ERR137286 Other lineage4.9 None
ERR6358979 HR-TB lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR176651 Other lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
ERR2514327 HR-TB lineage4.8 None
ERR736817 HR-TB lineage4.3.4 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
ERR3439432 RR-TB M.canetti;lineage4.6.4;lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR10808668 Other lineage2.2.1 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR6079962 HR-TB lineage2.2.1.1 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4817667 HR-TB lineage4.8 None
ERR4596902 MDR-TB lineage3 None
ERR3283031 Other La3;lineage4.9 None
ERR4814734 Other lineage1.2.1.1 None
SRR6044942 HR-TB lineage4.9 None
SRR26159047 RR-TB lineage4.6.3;lineage4.9 None
ERR926162 Sensitive lineage4.9 None
SRR6832787 Other lineage2.2.1 None
ERR245794 HR-TB lineage4.3.4.2.1 None
SRR5341300 HR-TB lineage4.9 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
SRR14801749 HR-TB lineage4.9 None
ERR124636 HR-TB lineage4.9 None
ERR176778 HR-TB lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR926160 Other lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SRR10315567 HR-TB lineage2.2.1 None
ERR3283032 Other lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
ERR1035122 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR2446566 Other lineage4.9 None
ERR1035162 MDR-TB M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR4769474 HR-TB lineage4.9 None
ERR5311079 MDR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
SRR9971112 HR-TB lineage2.2.1 None
SRR5341453 Other lineage4.9 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR4819462 Sensitive lineage4.9 None
ERR6359069 HR-TB lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR926164 Other lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR6044876 Sensitive lineage4.9 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
SRR5341455 Sensitive lineage4.9 None
ERR3797086 Sensitive lineage4.9 None
SRR1158918 Other lineage4.9 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR5341425 Other lineage4.9 None
ERR502889 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR1023509 MDR-TB lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR4815815 Sensitive lineage4.9 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR971389 Other lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
SRR28351584 HR-TB lineage2.2.1 None
ERR987722 MDR-TB None
SRR28351554 Other La1.6;lineage4 None
ERR11082350 MDR-TB lineage4.6.2.2 None
SRR6045795 Other lineage2.2.1 None
ERR4818710 Sensitive lineage4.9 None
SRR3675502 Sensitive lineage4.9 None
ERR4797264 HR-TB lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR779852 HR-TB lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR6046385 Sensitive lineage4.9 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4798099 HR-TB lineage4.9 None
SRR5341298 Other lineage4.9 None
ERR702405 HR-TB lineage4.9 None
ERR9787014 RR-TB lineage6.1.1 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR926165 Other lineage4.9 None
SRR3675390 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
ERR926156 Other lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
SRR5153091 HR-TB lineage4.3.3 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
ERR067712 Sensitive lineage4.9 None
SRR1181251 Other lineage2.2.1 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR4816762 Sensitive lineage4.9 None
ERR9787256 Other lineage6.1.3 None
ERR4818536 Other lineage4.9 None
ERR4818561 Sensitive lineage4.9 None
ERR1063855 Other lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR4821655 HR-TB lineage4.9 None
SRR5341310 Other lineage1.1.2 None
ERR6359066 HR-TB lineage4.9 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR5341308 HR-TB lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR3797063 Other La3;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR3797085 Other lineage4.9 None
SRR6511621 HR-TB lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
ERR4814639 HR-TB lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR4797285 MDR-TB lineage1.2.2.2 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR3675585 HR-TB lineage4.9 None
SRR5341387 Other lineage4.9 None
ERR4829530 Pre-XDR-TB lineage4.8 None
ERR4796254 Other lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR323039 MDR-TB La2;lineage4.9 None
ERR3801503 Other lineage4.6.2.2 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR3283042 HR-TB lineage4.9 None
SRR3675246 Other lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR473332 Other lineage4.9 None
SRR12708392 Other lineage2.2.1 None
ERR9787153 Other lineage6.1.3 None
SRR6046259 Sensitive lineage4.9 None
SRR5341467 Other lineage4.9 None
ERR9786711 Other lineage4.6.2.2 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR11972367 Sensitive lineage2.2.1 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR502510 HR-TB lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR1034634 HR-TB lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR926155 Other lineage4.9 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR11465510 Sensitive lineage4.3.4.2.1 None
ERR736856 HR-TB lineage4.9 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR502511 HR-TB lineage4.9 None
ERR181824 MDR-TB lineage4.9 None
ERR1063896 HR-TB None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR9786597 Other lineage4.6.2.2 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR3797029 Other lineage4.9 None
ERR4797474 Other lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR4798262 HR-TB La1.2.BCG None
SAMN02585910 RR-TB lineage2.2.1 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
ERR2693252 HR-TB lineage4.9 None
SRR1159378 Other lineage4.9 None
SRR11462861 Other La1.8.1 None
SRR1792478 HR-TB La1.7.1 None
SRR1791747 Other La1.8.1 None
ERR6866639 HR-TB lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
SRR26937107 MDR-TB lineage2.2.1 None
ERR6866410 HR-TB lineage4.9 None
SRR7535082 Other lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR4819314 HR-TB lineage1.1.1 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR9119669 MDR-TB lineage4.9 None
SRR3675586 RR-TB M.canetti;lineage4.6.4;lineage4.9 None
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR181887 Other lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR3799304 RR-TB lineage6.1.1 None
SRR7236177 Other La1.8.1 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR323066 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR3283011 Other La3;lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR12708411 HR-TB lineage1.2.2.2 None
ERR323062 HR-TB lineage4.9 None
ERR926163 Other lineage4.9 None
ERR751326 Other lineage4.9 None
SRR3675235 HR-TB lineage4.9 None
ERR176779 HR-TB lineage4.9 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR10808399 Sensitive lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR3283014 Other La3;lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR4819546 HR-TB lineage3 None
SRR14066533 RR-TB lineage1.1.1 None
ERR4769444 HR-TB lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR9970978 Other La1;lineage4.1.2 None
ERR4797184 HR-TB lineage4.9 None
ERR9786346 Sensitive lineage4.3.4.2 None
ERR11465352 Sensitive lineage4.3.4.1 None
SRR6044835 Other lineage4.9 None
ERR212125 HR-TB lineage4.9 None
ERR9787030 RR-TB lineage6.1.2 None
SRR6045892 Sensitive lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR736834 HR-TB lineage4.9 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None