Rv3457c - c.252G>C
Drug resistance types
86 Sensitive
3 RR-TB
104 HR-TB
20 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
89 Other
lineage Counts
| lineage | Count |
|---|---|
| 82 | |
| lineage4 | 71 |
| lineage4.9 | 54 |
| lineage4.8 | 5 |
| lineage4;lineage2 | 1 |
| lineage4.6.1.2 | 4 |
| lineage3.1.3 | 1 |
| lineage4.1 | 2 |
| lineage4.1.1.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3.3 | 2 |
| lineage1.1.1 | 2 |
| lineage3 | 3 |
| lineage4.6.2.2 | 5 |
| lineage2.2.1 | 21 |
| lineage1.1.2 | 1 |
| lineage4.9;lineage2.1 | 1 |
| lineage4.5 | 1 |
| lineage2.2.1.1 | 6 |
| lineage2.1 | 3 |
| lineage4.2.1.1 | 1 |
| lineage4.1.2 | 2 |
| lineage4.3.2.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage2.2 | 4 |
| lineage4.6.1.1 | 2 |
| La1.8.1 | 4 |
| lineage6.1.1 | 2 |
| lineage4.1.2.1 | 2 |
| La1.2 | 2 |
| lineage4;lineage3.1 | 1 |
| La1.3 | 1 |
| La1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage2.2.1.2 | 1 |
| lineage3.1.2 | 1 |
| lineage4.3.4 | 1 |
| lineage1.1.3.1 | 1 |
| lineage6.1.3 | 2 |
| lineage4.3.4.2 | 1 |
| lineage6 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.3.4.1 | 1 |
| La1.7.1 | 1 |
| lineage4;lineage2.2 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage1.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 308 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675550 | Other | None | ERR4816466 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | ERR212121 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4816762 | Other | lineage4;lineage2 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR4819051 | Other | lineage4 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4818536 | Other | lineage4.9 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4818607 | Sensitive | lineage4.9 | None | ERR4818561 | HR-TB | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341387 | Other | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR5341425 | Other | lineage4 | None | ERR4819357 | Other | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR4819462 | Other | lineage4 | None | SRR5341418 | Other | None | ERR4819546 | HR-TB | lineage3 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | ERR2514327 | HR-TB | lineage4.8 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | ERR1023509 | Other | None | ERR4819933 | Other | lineage4.9 | None | SRR5341313 | HR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341315 | Sensitive | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341467 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341469 | Other | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | ERR2693231 | Other | None | SRR5341470 | HR-TB | None | SRR6045892 | Sensitive | None | ERR2693230 | Other | None | ERR2693257 | Other | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6045832 | HR-TB | lineage4.9 | None | ERR2693254 | Other | None | SRR6046141 | Other | lineage4.9 | None | SRR6044780 | Other | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6044890 | Other | lineage4.9 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045158 | Other | lineage4.9 | None | SRR6045233 | HR-TB | None | ERR2693232 | Other | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | SRR6046397 | Other | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046362 | HR-TB | None | SRR6046385 | Other | lineage4.9 | None | ERR4828628 | MDR-TB | lineage4.5 | None | SRR6046460 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR4831997 | MDR-TB | lineage2.1 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831618 | MDR-TB | lineage2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6511621 | HR-TB | None | ERR323037 | HR-TB | lineage4 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR502510 | Sensitive | lineage4 | None | SRR6832249 | Other | lineage2.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR502889 | Other | None | ERR294266 | HR-TB | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR323053 | HR-TB | None | ERR323039 | HR-TB | None | ERR323107 | Other | lineage4 | None | ERR323045 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323066 | Sensitive | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR1034634 | HR-TB | None | ERR067699 | HR-TB | lineage4 | None | ERR067712 | HR-TB | lineage4 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR108471 | HR-TB | lineage4 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063855 | Other | lineage4 | None | ERR1063857 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1063896 | Sensitive | None | ERR067681 | HR-TB | None | ERR1035122 | Sensitive | None | ERR1063883 | Sensitive | lineage4 | None | ERR3283014 | HR-TB | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR133825 | Sensitive | lineage4 | None | ERR133986 | HR-TB | None | ERR137286 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283024 | Other | None | ERR3283028 | Other | None | ERR3283025 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3283041 | Other | lineage4.9 | None | ERR3283047 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3283057 | HR-TB | lineage4 | None | ERR3439432 | Other | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797014 | Other | None | ERR3797044 | Other | None | ERR3797017 | Other | None | ERR3797043 | HR-TB | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797048 | HR-TB | None | ERR3797060 | Other | La1.8.1 | None | ERR3797061 | Other | None | ERR3797063 | HR-TB | None | ERR3799304 | Other | lineage6.1.1 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797086 | Other | lineage4.9 | None | ERR3797087 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR4769442 | HR-TB | lineage4 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR4024991 | Other | None | ERR403298 | HR-TB | lineage4 | None | ERR4596902 | HR-TB | lineage3 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473332 | Other | lineage4 | None | ERR4769421 | Other | La1.2 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR405209 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4188247 | HR-TB | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4769521 | HR-TB | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4797184 | Sensitive | lineage4 | None | ERR4798262 | HR-TB | La1 | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4798406 | HR-TB | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6358979 | Other | None | ERR6358991 | HR-TB | None | ERR6359070 | Other | lineage4.9 | None | ERR6866410 | Sensitive | None | ERR6359069 | Other | lineage4.9 | None | ERR6866022 | Other | None | ERR6866639 | Other | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866807 | HR-TB | lineage4 | None | ERR736834 | Sensitive | lineage4 | None | ERR702404 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR751326 | Sensitive | lineage4 | None | ERR736839 | Other | None | ERR736865 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR736837 | Other | lineage4.9 | None | ERR736856 | HR-TB | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR9119669 | HR-TB | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR9786597 | Sensitive | lineage4.6.2.2 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR9787030 | Sensitive | lineage6 | None | ERR987722 | HR-TB | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR10809074 | Sensitive | lineage4 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10808805 | Sensitive | None | SRR1174897 | HR-TB | None | SRR1158918 | Sensitive | lineage4 | None | SRR1173568 | Other | lineage4.9 | None | SRR11462861 | Other | La1.8.1 | None | SRR1172310 | HR-TB | None | SRR1173777 | Other | lineage4 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1181251 | Other | lineage2.2.1 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181328 | Other | lineage2.2.1 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR14801749 | Sensitive | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR1792478 | HR-TB | La1.7.1 | None | ERR11082350 | MDR-TB | lineage4.6.2.2 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR8692863 | Other | lineage4;lineage2.2 | None | SRR8692898 | Other | lineage4.9 | None | ERR176778 | HR-TB | None | ERR176751 | HR-TB | None | ERR176779 | HR-TB | None | ERR176651 | HR-TB | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR4814639 | HR-TB | lineage4 | None | ERR4815471 | Other | lineage4.9 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675234 | Other | None | ERR181824 | HR-TB | lineage4 | None | ERR158583 | HR-TB | None | SRR3675246 | Sensitive | lineage4 | None | ERR176740 | HR-TB | None | ERR4816964 | Other | lineage4.9 | None | ERR181887 | HR-TB | None | SRR3675502 | Other | None |
|---|
