ERR323033
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR323041
|
HR-TB
|
M.canetti;lineage2.1
|
None
|
ERR176560
|
HR-TB
|
La1.7;lineage4.9
|
None
|
SRR15316191
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR27069409
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR25207014
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR29124275
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR1180226
|
HR-TB
|
lineage4.9
|
None
|
SRR21277302
|
Sensitive
|
lineage2.2.1.1
|
None
|
ERR736865
|
HR-TB
|
lineage4.3.2;lineage4.9
|
None
|
ERR736835
|
HR-TB
|
La1.7;M.canetti;lineage4.9
|
None
|
SRR21277791
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR21277268
|
RR-TB
|
lineage2.2.1.1
|
None
|
SRR3675444
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR21031701
|
Sensitive
|
lineage2.2.1.1
|
None
|
ERR323060
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR5311098
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR6358837
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
SRR15369019
|
Sensitive
|
lineage2.2.1.1
|
None
|
ERR4811296
|
MDR-TB
|
lineage2.2.1.1
|
cn
|
SRR25628602
|
Sensitive
|
lineage2.2.1.1
|
None
|
ERR4188342
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR21722243
|
Sensitive
|
lineage2.2.1.1
|
None
|
ERR4810741
|
HR-TB
|
La3;lineage2.1;lineage6.3
|
None
|
ERR987729
|
HR-TB
|
lineage3.1.2.1;lineage3.1.2.2
|
None
|
SRR1172310
|
HR-TB
|
lineage4.9
|
None
|
ERR323063
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR25206951
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR15316177
|
HR-TB
|
lineage2.2.1.1
|
None
|
SRR18213713
|
HR-TB
|
|
None
|
SRR21277418
|
Sensitive
|
lineage2.2.1.1
|
None
|
ERR323058
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR15316136
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR21277324
|
RR-TB
|
lineage2.2.1.1
|
None
|
ERR1193839
|
Sensitive
|
lineage4.3.4.2
|
gb
|
ERR473277
|
HR-TB
|
La3;M.canetti;lineage4.9
|
None
|
ERR323036
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR126608
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR736863
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR15316255
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR15316326
|
Sensitive
|
lineage2.2.1.1
|
None
|
ERR736848
|
Other
|
lineage4.9
|
None
|
ERR323040
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR25628601
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR21277621
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR3675486
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR323064
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR161033
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR6824511
|
Sensitive
|
lineage2.2.1.1
|
cn
|
SRR15316550
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
ERR926161
|
Sensitive
|
lineage4.9
|
None
|
SRR15316429
|
Sensitive
|
lineage2.2.1.1
|
None
|
ERR212121
|
HR-TB
|
lineage4.9;lineage6.3
|
None
|
SRR21277068
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR15315928
|
Sensitive
|
lineage2.2.1.1
|
None
|
ERR323053
|
MDR-TB
|
La2;lineage4.9;lineage9
|
None
|
SRR21277202
|
Sensitive
|
lineage2.2.1.1
|
None
|
ERR4819581
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR10305657
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR21277555
|
Sensitive
|
lineage2.2.1.1
|
None
|
ERR4188350
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR5311099
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR323055
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR21277572
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
ERR702404
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR30182874
|
Sensitive
|
La1.7;lineage2.2.1.1
|
None
|
SRR6280217
|
Sensitive
|
lineage2.2.1.1
|
cn
|
SRR6045785
|
MDR-TB
|
lineage4.2;lineage4.8.1;lineage4.9
|
None
|
SRR15316604
|
Sensitive
|
lineage2.2.1.1
|
None
|
ERR5311090
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR323054
|
MDR-TB
|
La3;M.canetti;lineage3.1
|
None
|
SRR6280188
|
Sensitive
|
lineage2.2.1.1
|
cn
|
SRR21279407
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR6325448
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
SRR27069366
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR29914420
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR124652
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR126600
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR6046295
|
HR-TB
|
lineage4.2;lineage4.9
|
None
|
SRR15723288
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR29051476
|
Sensitive
|
lineage2.2.1.1
|
None
|
ERR926165
|
Sensitive
|
lineage4.9
|
None
|
SRR21277134
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR21277432
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR3675568
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8
|
None
|
ERR502524
|
HR-TB
|
lineage4.9;lineage6.3
|
None
|
SRR15369024
|
Sensitive
|
lineage2.2.1.1
|
None
|
ERR176658
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR6046514
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR27069398
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR294248
|
MDR-TB
|
lineage2.1;lineage4.9
|
None
|
ERR5311083
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4811022
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR5311100
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR21277368
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR21277816
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR21277609
|
Sensitive
|
lineage2.2.1.1
|
None
|
ERR323039
|
HR-TB
|
La2;lineage4.9
|
None
|
SRR15722985
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR6325445
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR4810657
|
Sensitive
|
lineage2.2.1.1
|
cn
|
ERR4811105
|
HR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR27069391
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR926158
|
Sensitive
|
lineage4.9
|
None
|
ERR4798648
|
MDR-TB
|
lineage3.1.2.2
|
None
|
SRR21659813
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR5341470
|
MDR-TB
|
lineage4.9;lineage9
|
None
|
ERR4811584
|
Sensitive
|
lineage2.2.1.1
|
cn
|
SRR6046720
|
HR-TB
|
lineage4.9;lineage9
|
None
|
SRR21277462
|
Sensitive
|
lineage2.2.1.1
|
None
|
ERR5311089
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR3675464
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3;lineage8
|
None
|
ERR126618
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR6325444
|
MDR-TB
|
M.canetti;lineage2.1;lineage6.3
|
None
|
SRR3675518
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
SRR13583478
|
HR-TB
|
lineage4.3.4.1
|
None
|
ERR926164
|
Other
|
lineage4.9
|
None
|
ERR5311102
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR1183111
|
HR-TB
|
lineage4.9
|
None
|
SRR21277353
|
Sensitive
|
lineage2.2.1.1
|
None
|
ERR8976043
|
HR-TB
|
lineage2.1;lineage2.2;lineage6.3
|
None
|
SRR21277088
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR21277434
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR21279328
|
Sensitive
|
lineage2.2.1
|
None
|
ERR1873393
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4798262
|
HR-TB
|
La1.2.BCG
|
None
|
ERR323038
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR386953
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR3675554
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR12416824
|
HR-TB
|
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
|
None
|
SRR20632794
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR987722
|
MDR-TB
|
|
None
|
SRR6325442
|
HR-TB
|
lineage2.1;lineage4.1.1.1;lineage6.3
|
None
|
ERR234659
|
Other
|
|
None
|
SRR8552928
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR323047
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR3675558
|
HR-TB
|
M.canetti;lineage4.1.1.3;lineage6.3;lineage8
|
None
|
SRR21279331
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
ERR553154
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR15315919
|
Sensitive
|
lineage2.2.1.1
|
None
|
ERR3797016
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR21291108
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR14519112
|
Sensitive
|
lineage2.2.1.1
|
None
|
ERR038268
|
HR-TB
|
La3;M.canetti;lineage4.8;lineage4.9
|
None
|
ERR926155
|
Sensitive
|
lineage4.9
|
None
|
SRR21277694
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR21277750
|
Other
|
lineage2.2.1.1
|
None
|
ERR1035239
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR21277346
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR15316182
|
Sensitive
|
lineage2.2.1.1
|
None
|
ERR4811020
|
RR-TB
|
lineage2.2.1.1
|
cn
|
ERR5311081
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR21277474
|
Sensitive
|
lineage2.2.1.1
|
None
|
ERR323034
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage3.1
|
None
|
ERR124651
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
|
None
|
ERR5311101
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR124642
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
|
None
|
ERR3797028
|
HR-TB
|
M.canetti;lineage4.9
|
None
|
DRR034350
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR21675936
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR21277063
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR15316414
|
Sensitive
|
lineage2.2.1.1
|
None
|
ERR1035138
|
MDR-TB
|
lineage2.1;lineage4.9
|
None
|
ERR1873396
|
Pre-XDR-TB
|
M.canetti;lineage2.2
|
None
|
SRR1174897
|
MDR-TB
|
lineage4.9;lineage9
|
None
|
ERR5311078
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR21277737
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR15368801
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR21277027
|
Sensitive
|
lineage2.2.1.1
|
None
|
ERR294266
|
HR-TB
|
lineage4.2;lineage4.8.1;lineage4.9
|
None
|
SRR15316131
|
Other
|
lineage2.2.1.1
|
None
|
SRR6325447
|
MDR-TB
|
lineage2.1;lineage4.1.1.1;lineage6.3
|
None
|
ERR5311082
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.9
|
None
|
ERR278594
|
HR-TB
|
lineage2.1;lineage4.9
|
None
|
SRR3675515
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR13423648
|
Sensitive
|
lineage2.2.1.1
|
None
|
ERR4816466
|
HR-TB
|
lineage4.9
|
None
|
ERR926154
|
Sensitive
|
lineage4.9
|
None
|
ERR971389
|
Sensitive
|
lineage4.9
|
None
|
SRR8217918
|
HR-TB
|
lineage4.9
|
None
|
SRR21277852
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR3675450
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
SRR21277423
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR15368839
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR21277374
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR21279435
|
Sensitive
|
lineage2.2.1.1
|
None
|
SRR6280312
|
Sensitive
|
lineage2.2.1.1
|
cn
|
ERR5311096
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR21277822
|
Sensitive
|
lineage2.2.1.1
|
None
|