Rv0701 - c.-218C>T
Drug resistance types
2 Sensitive
4 RR-TB
32 HR-TB
9 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
23 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 6 |
| lineage4.9 | 31 |
| La1;lineage4.9 | 2 |
| lineage5.2 | 2 |
| lineage1.1.3.1 | 1 |
| 1 | |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.6.2.2 | 2 |
| lineage1.2.1.2 | 1 |
| lineage4.2.1 | 1 |
| lineage4 | 2 |
| lineage4.3.4.1 | 1 |
| lineage3 | 2 |
| La1.6;lineage4 | 1 |
| La3;lineage4.9 | 5 |
| lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1;lineage4.1.2 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage2.2 | 1 |
| lineage4.9.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 72 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1181289 | RR-TB | lineage2.2.1 | None | SRR10809074 | HR-TB | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR9119500 | MDR-TB | lineage5.2 | None | SRR1180137 | RR-TB | lineage2.2.1 | None | SRR6046485 | Other | lineage4.9 | None | ERR736856 | HR-TB | lineage4.9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | ERR9786843 | Other | None | ERR3797029 | Other | lineage4.9 | None | ERR779852 | HR-TB | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR6045555 | Other | lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | SRR6045219 | HR-TB | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR4816478 | HR-TB | lineage4 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | ERR4819241 | Other | lineage4.9 | None | SRR6046594 | Other | lineage4.9 | None | SRR28351554 | Other | La1.6;lineage4 | None | SRR13423649 | Other | lineage2.2.1 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR1167384 | Other | La3;lineage4.9 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR1169306 | Other | La3;lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR323107 | HR-TB | lineage4.9 | None | ERR176751 | HR-TB | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | SRR19295647 | HR-TB | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | SRR1165628 | Other | La3;lineage4.9 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR736863 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | SRR28351339 | MDR-TB | lineage4 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR212033 | Other | lineage4.9 | None | SRR1183049 | RR-TB | lineage2.2 | None | ERR245758 | Other | lineage4.9.1 | None | ERR6866410 | HR-TB | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR1181020 | Other | lineage2.2.1 | None | ERR990545 | RR-TB | lineage3 | None | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR4819877 | HR-TB | lineage4.9 | None |
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