Rv1173 - c.1197A>G


Drug resistance types
7 Sensitive 13 RR-TB 74 HR-TB 36 MDR-TB 3 Pre-XDR-TB 3 XDR-TB 115 Other
lineage Counts
lineage Count
lineage2.1;lineage4.9 13
22
lineage4.9;lineage6.3 7
lineage2.2.1.2 1
lineage4.3.4 1
La3;M.canetti;lineage2.2.1 1
M.canetti;lineage2.1;lineage4.9 19
lineage4.9 41
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage2.2.1 14
La3;lineage4.9 2
lineage2.1 4
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 2
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La2;lineage4.9 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.9;lineage9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
lineage2.2 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.8 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage4.3.4.1 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
M.canetti;lineage4.9 5
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 2
La1.7.1 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage2.1;lineage4.9;lineage6.3 7
La3;lineage2.1;lineage4.9 2
M.canetti;lineage2.1;lineage6.3 2
M.canetti;lineage2.1;lineage4.9;lineage6.3 5
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage4.2;lineage4.9 2
La1.7;lineage4.9 4
M.canetti;lineage2.2 2
lineage4.9;lineage7 4
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
La1.2.BCG;La1.8.1 1
La3;lineage2.1;lineage4.9;lineage6.3 2
La3;M.canetti;lineage4.9 1
M.canetti;lineage4.9;lineage9 1
M.canetti;lineage2.1;lineage4 1
La1.7;lineage4.9;lineage7 2
La1.6;La3;M.canetti;lineage4.2.2 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage2.1;lineage6.3 2
lineage3 1
lineage1.1 1
lineage1;lineage4.9 1
lineage4.1.1.1 2
lineage4 3
La1.8.1 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.1.3 2
M.canetti;lineage4.3.1;lineage4.9 1
lineage2.2.2;lineage4 1
lineage5.2 2
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage4.6.2.2 2
lineage4.1.1;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage4.2;lineage4.8.1;lineage4.9 1
La1.7;lineage3;lineage4.9;lineage7 1
M.canetti;lineage4.2 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage2.1;lineage4.9;lineage7 1
lineage4.2;lineage4.6.3;lineage4.9 1
M.canetti;lineage4.6.4;lineage4.9 1
lineage3.1;lineage9 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
La2;lineage2.2 1
lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.2.2.2 1
lineage4.1.2 1
lineage4.6.1 1
La3;M.canetti;lineage2.1;lineage4.9 1
lineage6.3.1 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La1.7.1;lineage4.9 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La3 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage4.1.2.1 2
lineage4.6.4;lineage4.9 1
La1.7;M.canetti;lineage4.9 1
spoligotype Counts
spoligotype Count
None 251
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6046540 Other lineage2.1;lineage4.9 None
SRR18213713 HR-TB None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR4797054 Pre-XDR-TB lineage2.2.1.2 None
ERR736817 HR-TB lineage4.3.4 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR17688778 RR-TB lineage2.2.1 None
SRR26399973 Other La3;lineage4.9 None
SRR1173355 Other lineage4.9 None
SRR3416776 Other lineage2.1 None
ERR4820773 HR-TB lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR4800341 Other None
ERR4810741 HR-TB None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR8976043 HR-TB lineage2.2 None
SRR3675236 Other None
SRR3675524 Other lineage4.9;lineage6.3 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR4817893 Other lineage4.8 None
ERR4819877 HR-TB lineage4.9 None
SRR7535086 Other None
ERR4817731 HR-TB lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
SRR25514964 Sensitive lineage2.2.1 None
SRR28119777 Other lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR9117709 Other None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR7240492 HR-TB La1.7.1 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR28119811 Other lineage2.2.1 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SRR29016780 Other lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR9786843 Other None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4814352 Other lineage2.2.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR3675539 HR-TB lineage4.9;lineage7 None
ERR736875 HR-TB lineage4.9 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR1640750 Other None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4407463 HR-TB None
ERR4819241 Other lineage4.9 None
SRR1172951 Other lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4818929 HR-TB lineage4.9 None
SRR1196583 Other lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1710057 Other lineage2.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR5162090 RR-TB lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
SRR1169194 Other lineage4.9 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4799683 Pre-XDR-TB lineage3 in
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3077978 Other lineage1.1 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR2027263 Other lineage4 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR14801749 HR-TB lineage4.9 None
ERR3797023 HR-TB La1.8.1 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR3804169 HR-TB lineage4.1.3 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR4811142 RR-TB None
ERR4811075 Other None
SRR28119753 Other lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR29093105 Other lineage2.2.2;lineage4 None
SRR1196546 Other lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
SRR29093909 Other lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
ERR1063862 HR-TB lineage4.9 None
SRR12142341 HR-TB lineage2.2.1 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
SRR12416824 HR-TB None
ERR3283044 Other lineage4 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
SRR20969677 HR-TB lineage2.1 None
ERR4816466 HR-TB lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR702406 Other lineage2.1 None
SRR6325442 HR-TB lineage4.1.1;lineage4.9 None
SRR3675441 Other lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR1173400 Other lineage4.9 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675456 RR-TB lineage4.9;lineage7 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR6046225 Other lineage4.9;lineage6.3 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR3797070 Other lineage4.9 None
SRR1184381 MDR-TB None
SRR25514963 Sensitive lineage2.2.1 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR3675487 Other M.canetti;lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR4819422 HR-TB lineage4.9 None
ERR4819781 Other lineage2.2.1 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR17688721 RR-TB lineage2.2.1 None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR3439432 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3468607 Other lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR3675214 Other lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR3675267 Other La1.7;lineage4.9 None
SRR6045526 Other lineage4.9 None
ERR181887 Other lineage4.9 None
ERR2513470 Other lineage4.2.2.2 None
ERR3797015 HR-TB lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR4811105 HR-TB None
ERR4818347 Other lineage4.1.2 None
ERR502912 Other lineage2.2.1 None
ERR6358755 Other lineage4.6.1 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4811311 Other None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4815441 HR-TB lineage4.9 None
ERR9787139 Other lineage6.3.1 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR29017461 Other La3;lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR9117721 HR-TB None
ERR4816478 HR-TB lineage4 None
SRR18003019 Other lineage2.2.1 None
ERR4816585 Other lineage2.2.1 None
SRR8217918 HR-TB lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046382 Sensitive lineage2.2.1 None
ERR4816656 Other lineage4.9 None
SRR6325447 HR-TB lineage4.1.1.1 None
SRR1172817 Other La3 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR3675494 RR-TB lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184294 Other lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR2514692 Other None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
ERR234659 Other None
SRR10808730 Other lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR6044815 Other lineage4.9 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
ERR9786604 Other None
SRR3675572 Other None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None