lineage | Count |
---|---|
lineage4.5 | 2 |
90 | |
lineage2.2 | 6 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage2 | 2 |
lineage9;lineage3.1 | 1 |
lineage4.1 | 1 |
lineage4.3 | 1 |
lineage4 | 8 |
lineage3 | 1 |
lineage2.2.1 | 4 |
lineage1.1 | 1 |
lineage5.2 | 2 |
La2 | 1 |
lineage4.1.2.1 | 5 |
lineage4.9 | 3 |
lineage4.6.2.2 | 2 |
La1.8.1 | 1 |
lineage3.1.2 | 1 |
lineage4.1.3 | 3 |
lineage4.8 | 1 |
lineage6.3.1 | 1 |
La3 | 1 |
lineage4.3.4.1 | 1 |
lineage1.1.1 | 1 |
spoligotype | Count |
---|---|
None | 141 |
ID | Drug resistance | Lineage | Country iso2 | SRR18213713 | HR-TB | lineage4.5 | None | SRR19303884 | HR-TB | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR20969677 | HR-TB | lineage2 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR3675488 | HR-TB | None | ERR4815604 | HR-TB | None | SRR3675465 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675482 | HR-TB | None | SRR3675222 | Other | None | SRR3675486 | HR-TB | None | SRR3675221 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675236 | HR-TB | None | SRR3675501 | HR-TB | None | SRR3675311 | Other | None | ERR176643 | HR-TB | None | ERR2027263 | Other | lineage4 | None | SRR3675383 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | ERR176751 | HR-TB | None | SRR3675558 | HR-TB | None | SRR3675545 | HR-TB | None | ERR212033 | HR-TB | None | SRR3675574 | HR-TB | None | SRR3675572 | Other | None | ERR212121 | HR-TB | None | SRR3675571 | HR-TB | None | ERR234659 | HR-TB | None | ERR4816466 | HR-TB | None | ERR4816656 | HR-TB | None | SRR6045526 | HR-TB | None | ERR2693239 | HR-TB | None | ERR4818929 | HR-TB | None | SRR5341300 | Other | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | ERR2514841 | Sensitive | lineage3 | None | SRR5341470 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6045399 | Other | None | SRR6325442 | HR-TB | None | ERR4830353 | Other | None | SRR6046514 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR3077978 | Other | lineage1.1 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR502524 | HR-TB | La2 | None | ERR5311090 | HR-TB | None | ERR5311081 | HR-TB | None | ERR5311099 | HR-TB | None | SRR8217918 | HR-TB | None | ERR1063857 | HR-TB | None | ERR323038 | HR-TB | None | ERR323039 | HR-TB | None | ERR323053 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR323108 | HR-TB | lineage4 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283058 | Other | lineage4.9 | None | ERR3283017 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283051 | Other | lineage4.9 | None | ERR3797016 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797043 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797058 | Other | lineage4.9 | None | ERR3797069 | Other | None | ERR3797083 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4423599 | HR-TB | lineage4.1.3 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4797474 | Other | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4188350 | HR-TB | None | ERR4798099 | Other | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR6358837 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR5336148 | Other | None | ERR4811105 | HR-TB | None | ERR6358991 | HR-TB | None | ERR6866639 | Other | None | ERR6359045 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR736835 | HR-TB | None | ERR736865 | HR-TB | None | ERR702404 | HR-TB | None | ERR9786604 | Other | None | ERR8976043 | HR-TB | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9786569 | Other | lineage4.8 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786843 | Other | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9787197 | Other | None | SRR1167384 | Other | lineage4 | None | ERR987722 | HR-TB | None | SRR1169306 | Other | None | SRR1169249 | Other | La3 | None | SRR1172310 | HR-TB | None | SRR1174897 | HR-TB | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR12142341 | HR-TB | None | SRR12416824 | HR-TB | None | SRR13423544 | Other | lineage4.5 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR15368973 | Other | None | SRR1640750 | HR-TB | None |
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