Rv3795 - c.1659G>C
Drug resistance types
5 Sensitive
8 RR-TB
28 HR-TB
16 MDR-TB
3 Pre-XDR-TB
1 XDR-TB
80 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;lineage1.1.2 | 1 |
| lineage4.9 | 30 |
| lineage4.3.3 | 4 |
| lineage4.1.2.1 | 2 |
| lineage2.2.1;lineage3 | 1 |
| lineage4.2.2.2 | 1 |
| lineage3.1 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage5.2 | 2 |
| lineage4.6.2.2 | 4 |
| lineage1.1.3.2 | 1 |
| La3 | 2 |
| lineage1.1.1 | 1 |
| lineage2.2.1.1 | 2 |
| lineage2.2.1 | 6 |
| lineage2.1;lineage4.9;lineage6.3 | 6 |
| lineage3 | 2 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage6.3 | 4 |
| 9 | |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage4.1.1.3 | 3 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9 | 5 |
| lineage2.1 | 4 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage2.2.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage2.2 | 1 |
| lineage4.4.1.1 | 2 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.9 | 2 |
| lineage2.2.1;lineage6.3 | 1 |
| M.canetti;lineage4.9 | 2 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.1;lineage4.8 | 2 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage4.3.4.1 | 1 |
| La3;lineage2 | 1 |
| lineage4.1.2 | 1 |
| La3;lineage2.1;lineage4.9 | 3 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| La3;lineage2.2.1 | 1 |
| La1.7;lineage4.2 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| La3;lineage4.8 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage4.8 | 2 |
| lineage4.6.1.1 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage1.2.2.2 | 2 |
| La1.2.BCG | 1 |
| lineage6.3.1 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.9.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 141 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | SRR1173633 | Other | lineage4.9 | None | SRR1173218 | Other | lineage4.3.3 | None | ERR4816760 | Sensitive | lineage4.1.2.1 | None | SRR6045555 | Other | lineage4.9 | None | SRR6045526 | Other | lineage4.9 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | SRR1173778 | Other | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR26159043 | Other | lineage4.9 | None | ERR2513470 | Other | lineage4.2.2.2 | None | SRR6045219 | HR-TB | lineage4.9 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1173400 | Other | lineage4.9 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR3797043 | Sensitive | lineage4.9 | None | ERR553132 | MDR-TB | lineage4.1.2.1 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR7821123 | Other | lineage1.1.3.2 | None | SRR1165699 | Other | lineage4.9 | None | SRR1172728 | RR-TB | La3 | None | SRR14066533 | RR-TB | lineage1.1.1 | None | SRR1180147 | RR-TB | lineage2.2.1.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4797588 | MDR-TB | lineage3 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | SRR3675508 | MDR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | SRR1173363 | Other | None | ERR9786843 | Other | None | SRR1196768 | MDR-TB | None | SRR28119777 | Other | lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR4800341 | HR-TB | lineage3 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | SRR1710057 | Other | lineage2.1 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR18910194 | HR-TB | lineage2.2.2 | None | SRR18003019 | Other | lineage2.2.1 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | SRR1196677 | Other | lineage2.2 | None | ERR12268496 | Sensitive | lineage4.4.1.1 | None | ERR702406 | Other | lineage2.1 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR1184312 | Other | lineage2.2.1 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR15368973 | Other | lineage4.9 | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | SRR6789621 | Other | lineage4.9 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR3797085 | Other | lineage4.9 | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR9786525 | RR-TB | lineage4.1;lineage4.8 | None | SRR1184294 | Other | lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | SRR1196566 | Other | lineage4.9 | None | SRR21732980 | Other | lineage4.3.3 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | ERR3801503 | Other | lineage4.6.2.2 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR9119500 | MDR-TB | lineage5.2 | None | SRR1172234 | Other | lineage4.9 | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR4818347 | Other | lineage4.1.2 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | SRR1196546 | Other | lineage4.9 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1172817 | Other | La3 | None | SRR26937071 | MDR-TB | La3;lineage2.2.1 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR6046485 | Other | lineage4.9 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | SRR1184372 | MDR-TB | None | ERR2514692 | Other | None | SRR25827682 | Other | None | SRR1196583 | Other | lineage4.9 | None | ERR4817893 | Other | La3;lineage4.8 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | SRR1173355 | Other | lineage4.9 | None | SRR1169194 | Other | lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR2229084 | Sensitive | lineage4.8 | dk | SRR6046225 | Other | lineage4.9;lineage6.3 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | ERR502912 | Other | lineage2.2.1 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | SRR23961558 | RR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | SRR3675248 | Other | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | SRR1172951 | Other | lineage4.9 | None | ERR3283042 | HR-TB | lineage4.9 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR4797201 | Other | lineage1.2.2.2 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR3416776 | Other | lineage2.1 | None | ERR9786711 | Other | lineage4.6.2.2 | None | ERR11465024 | Other | lineage4.1.1.3 | None | SRR1180172 | RR-TB | lineage2.2.1 | None | SRR1184381 | MDR-TB | None | SRR1172857 | Other | None | ERR4407463 | HR-TB | None | SRR28119805 | Other | lineage4.9 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR502908 | HR-TB | lineage2.2.1 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR245758 | Other | lineage4.9.1 | None | SRR26399973 | Other | La3;lineage4.9 | None |
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