Rv1173 - c.1923C>T


Drug resistance types
4 Sensitive 8 RR-TB 40 HR-TB 22 MDR-TB 3 Pre-XDR-TB 2 XDR-TB 80 Other
lineage Counts
lineage Count
lineage4.9 29
lineage2.1;lineage4.9 4
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage2.2.1 8
lineage5.2 2
La1.7;M.canetti;lineage4.9 3
lineage4.3.3 2
La3 2
M.canetti;lineage4.9 4
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage1.2.2.2 1
lineage6.1.3 1
La3;lineage2.1;lineage4.9 3
lineage2.1;lineage4.9;lineage6.3 5
lineage4.2;lineage4.6.3;lineage4.9.1 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La3;lineage2.1;lineage4.9;lineage6.3 3
lineage4.9;lineage6.3 2
7
M.canetti;lineage2.2 2
lineage2.1;lineage4.9;lineage7 1
lineage2.1 4
lineage3 4
La3;lineage4.9 6
lineage4.9;lineage7 1
La1.6;La3;lineage4.9 2
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage2.2.1;lineage6.3 1
lineage4.2.2.2 1
lineage4.6.2.2 2
La1.7;lineage4.9 4
lineage4.1.1.3 1
lineage4.6.3;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.3.4.1 2
lineage3.1.1 1
lineage4.1;lineage4.8 2
lineage4.2;lineage4.6.3;lineage4.9 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage4.1.2 1
M.canetti;lineage2.1;lineage6.3 1
lineage4.2;lineage4.9 2
La3;lineage2.1;lineage6.3 1
lineage4.1.2.1 2
M.canetti;lineage2.1;lineage4.9 2
lineage2.2.2 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage4.6.1.1 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage4.4.1.1 1
lineage3.1 1
La3;lineage4.3.4 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.1.1.1 1
lineage1.2.2.1;lineage4.4.1.1 1
La3;lineage4.8 2
La3;lineage2 1
lineage4.2;lineage4.8.1;lineage4.9 2
La1.6;lineage4 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
lineage6.3.1 1
La3;M.canetti;lineage2.2.1 1
La3;lineage1.1.2 1
lineage4.3.4.2.1 1
spoligotype Counts
spoligotype Count
None 159
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1173778 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1173118 Other lineage2.2.1 None
SRR6789621 Other lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR1172951 Other lineage4.9 None
SRR21732980 Other lineage4.3.3 None
SRR1172728 RR-TB La3 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR4797201 Other lineage1.2.2.2 None
ERR9787153 Other lineage6.1.3 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
SRR1172817 Other La3 None
ERR7821163 Other lineage2.2.1 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR1034634 HR-TB lineage4.9 None
SRR6046594 Other lineage4.9 None
SRR6046485 Other lineage4.9 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR11252736 Other lineage4.9 None
SRR7535086 Other None
ERR4407463 HR-TB None
SRR28119805 Other lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
SRR1710057 Other lineage2.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR212033 Other lineage4.9 None
SRR18003019 Other lineage2.2.1 None
ERR9896144 Other lineage3 None
SRR1167384 Other La3;lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR6044942 HR-TB lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR1184312 Other lineage2.2.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR2513470 Other lineage4.2.2.2 None
SRR6045219 HR-TB lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SRR3675267 Other La1.7;lineage4.9 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR3283032 Other lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR3797085 Other lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR11465151 Sensitive lineage4.3.4.1 None
SRR1173562 Sensitive lineage4.9 None
SRR1196474 Other lineage3.1.1 None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR1173153 Other lineage4.9 None
ERR9786525 RR-TB lineage4.1;lineage4.8 None
SRR1196566 Other lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR4818347 Other lineage4.1.2 None
SRR1196546 Other lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR28119741 Pre-XDR-TB lineage2.2.1 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR6045233 Other M.canetti;lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR11252612 Other La3;lineage4.9 None
SRR1196768 MDR-TB None
SRR28119777 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR502908 HR-TB lineage2.2.1 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR9786384 Sensitive lineage4.1.2.1 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
SRR26399973 Other La3;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR1173355 Other lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
ERR702406 Other lineage2.1 None
ERR6358755 Other lineage4.6.1.1 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1169306 Other La3;lineage4.9 None
ERR502912 Other lineage2.2.1 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR3675461 RR-TB lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
SRR1173400 Other lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR11465714 Other lineage1.2.2.1;lineage4.4.1.1 None
ERR176751 HR-TB lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
ERR12015083 Other La3;lineage4.8 None
SRR1165628 Other La3;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR20969677 HR-TB La3;lineage2 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR4797588 MDR-TB lineage3 None
SRR3416776 Other lineage2.1 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR1184381 MDR-TB None
ERR9786843 Other None
SRR1184372 MDR-TB None
ERR234659 HR-TB None
SRR28044634 Other lineage3 None
SRR28351554 Other La1.6;lineage4 None
SRR1196583 Other lineage4.9 None
SRR3675441 RR-TB lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR4817893 Other La3;lineage4.8 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR9787139 Other lineage6.3.1 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR1169194 Other lineage4.9 None
ERR176549 Other lineage4.3.4.2.1 None
ERR990545 RR-TB lineage3 None
SRR6045555 Other lineage4.9 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR15368973 Other lineage4.9 None
SRR12142341 HR-TB lineage2.1 None