Rv1173 - c.1923C>T
Drug resistance types
31 Sensitive
1 RR-TB
60 HR-TB
16 MDR-TB
10 Pre-XDR-TB
0 XDR-TB
59 Other
lineage Counts
| lineage | Count |
|---|---|
| 75 | |
| lineage4.9 | 14 |
| lineage1.2.2.2 | 1 |
| lineage3 | 7 |
| lineage4 | 11 |
| lineage4.6.1.1 | 1 |
| lineage4.3.4 | 2 |
| lineage4.1.1.3 | 2 |
| lineage1.1.2 | 1 |
| lineage2.2.1 | 11 |
| lineage2.2 | 4 |
| lineage5.2 | 2 |
| lineage4.6.2.2 | 2 |
| lineage4.8;lineage4.1 | 2 |
| lineage4.1.2.1 | 7 |
| lineage6.1.3 | 1 |
| lineage6.3.1 | 1 |
| La3 | 1 |
| lineage4.3.3 | 3 |
| lineage3.1 | 2 |
| lineage2 | 2 |
| lineage4.3.4.1 | 1 |
| lineage2.1 | 2 |
| lineage4.1.1 | 1 |
| lineage4.2.2.2 | 2 |
| lineage4.4.2 | 1 |
| lineage4.7 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.3 | 1 |
| lineage4.8 | 5 |
| lineage4.4.1.1 | 1 |
| La1.2.BCG | 1 |
| lineage4.8;La3 | 1 |
| lineage4.1.2 | 1 |
| lineage1.1.1 | 1 |
| lineage5.1.3 | 1 |
| lineage4.3.2.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.1.1.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 177 |
Geographic prevalence
Country level data for this variant is available for 21 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3797036 | HR-TB | None | ERR3797017 | Other | None | ERR3797014 | Other | None | ERR4811022 | HR-TB | None | ERR3797044 | Other | None | ERR3797061 | Other | None | ERR3797086 | Other | lineage4.9 | None | ERR4407463 | HR-TB | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR387051 | HR-TB | None | ERR4810741 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR4811105 | HR-TB | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6358979 | Other | None | ERR702404 | HR-TB | None | ERR702406 | HR-TB | None | ERR736835 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR9117769 | Sensitive | lineage4.1.1.3 | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR736874 | HR-TB | None | ERR7821163 | Other | lineage2.2.1 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786384 | Sensitive | lineage4.1.2.1 | None | ERR9634265 | Sensitive | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR9786843 | Other | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9896144 | Other | lineage3 | None | SRR1169249 | Other | La3 | None | SRR1167384 | Other | lineage4 | None | ERR990545 | Other | lineage3 | None | SRR10808805 | Sensitive | None | SRR1169194 | Other | None | SRR1169306 | Other | None | SRR1172728 | MDR-TB | None | SRR1172234 | Other | None | SRR1173118 | Other | None | SRR1172817 | HR-TB | None | SRR1172857 | MDR-TB | None | SRR1172951 | Other | None | SRR1173384 | Other | lineage4 | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173363 | HR-TB | None | SRR1173153 | HR-TB | None | SRR1173330 | Pre-XDR-TB | lineage4 | None | SRR1173484 | Other | lineage4 | None | SRR1173400 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173778 | Other | None | SRR1173629 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1184294 | HR-TB | None | SRR1173788 | Other | None | SRR1175049 | RR-TB | None | SRR1175074 | MDR-TB | None | SRR1175090 | Other | lineage4.9 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184372 | MDR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184381 | MDR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196494 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR1196566 | HR-TB | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR12142341 | HR-TB | None | SRR15368973 | Other | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196768 | MDR-TB | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR13837599 | Sensitive | lineage4.9 | None | SRR1710057 | Other | lineage2.1 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR19304036 | HR-TB | None | SRR3675488 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR176793 | Other | lineage4.1.1 | None | ERR4815799 | Sensitive | lineage4.2.2.2 | gb | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675222 | Other | None | SRR3416776 | Other | lineage2.1 | None | ERR4814584 | Sensitive | lineage4.4.2 | None | ERR181744 | HR-TB | None | ERR4815461 | Sensitive | lineage4.1.2.1 | gb | ERR4815376 | Sensitive | lineage4.7 | gb | ERR176549 | Other | lineage4.3.4.2.1 | None | SRR3675234 | Other | None | SRR3675501 | HR-TB | None | SRR3675456 | HR-TB | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR176643 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675280 | HR-TB | lineage4.9 | None | ERR4817354 | Other | lineage3 | gb | ERR176751 | HR-TB | None | ERR4816005 | Sensitive | lineage2.2.1 | None | SRR3675555 | HR-TB | None | ERR2229084 | Sensitive | lineage4.8 | dk | ERR4817037 | Other | lineage4.9 | None | ERR212033 | HR-TB | None | ERR502912 | Other | lineage2.2.1 | None | SRR3742665 | HR-TB | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | ERR4816760 | Sensitive | lineage4.1.2.1 | None | ERR4817421 | Other | La1.2.BCG | gb | ERR2510578 | Pre-XDR-TB | lineage3 | pk | ERR2510713 | Pre-XDR-TB | lineage2.2.1 | it | ERR4817893 | Other | lineage4.8;La3 | None | ERR4818394 | Other | lineage4.9 | None | ERR4818347 | Other | lineage4.1.2 | None | ERR234659 | HR-TB | None | ERR2513470 | Other | lineage4.2.2.2 | None | ERR2515449 | Sensitive | lineage4.8 | za | ERR4818588 | Sensitive | lineage1.1.1 | None | ERR4817558 | Sensitive | lineage4.9 | None | ERR2515433 | Sensitive | lineage2.2.1 | za | ERR2510246 | Pre-XDR-TB | lineage3 | pk | ERR2510453 | Pre-XDR-TB | lineage4.8 | pk | ERR4817658 | Sensitive | lineage5.1.3 | None | ERR2515311 | Sensitive | lineage4.3.2.1 | za | ERR4819229 | Sensitive | lineage4.1.2.1 | gb | ERR4819581 | Sensitive | lineage2.2.1.1 | None | SRR5341302 | HR-TB | None | ERR4820906 | Sensitive | lineage4.9 | None | ERR2516017 | MDR-TB | lineage4.1.2.1 | za | ERR4821074 | Sensitive | lineage4.9 | None | ERR2515017 | Sensitive | lineage2.2.1 | gb | ERR2693231 | Other | None | SRR6045432 | Other | lineage3 | gb | ERR2693230 | Other | None | SRR6044890 | Other | lineage4.9 | None | ERR2693254 | Other | None | ERR2693257 | Other | None | SRR6045519 | HR-TB | None | ERR4821445 | Sensitive | lineage4.1.2.1 | None | SRR6045758 | Sensitive | lineage4.3.4.2.1 | gb | SRR6045817 | Sensitive | lineage4.8 | gb | SRR6046133 | HR-TB | None | SRR6044775 | Sensitive | lineage4.8 | gb | SRR6045555 | HR-TB | None | SRR6045010 | Other | lineage4 | None | ERR2693232 | Other | lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6045233 | HR-TB | None | SRR6045264 | Sensitive | lineage2.2.1 | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046673 | HR-TB | lineage4.1.1.3.1 | gb | ERR4831546 | HR-TB | lineage2.2 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR502908 | HR-TB | lineage2.2.1 | None | ERR294266 | HR-TB | None | ERR502532 | HR-TB | None | ERR067699 | HR-TB | lineage4 | None | SRR7535086 | Other | None | ERR323108 | HR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR3283024 | Other | None | ERR133825 | Sensitive | lineage4 | None | ERR3283025 | HR-TB | None | ERR3283032 | HR-TB | None |
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